RNA–Protein interactions for RNA: ENST00000266058.8

SLIT1-201, Transcript of slit guidance ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLIT1, Length 7,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-201ENST00000266058 SOX12O15370 315 aa18.05■□□□□ 0.48
SLIT1-201ENST00000266058 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
SLIT1-201ENST00000266058 G3V3G9 751 aa18.02■□□□□ 0.47
SLIT1-201ENST00000266058 DCAF8Q5TAQ9 597 aa18.02■□□□□ 0.47
SLIT1-201ENST00000266058 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
SLIT1-201ENST00000266058 CEP89Q96ST8 783 aa17.99■□□□□ 0.47
SLIT1-201ENST00000266058 MCCP23508 829 aa17.99■□□□□ 0.47
SLIT1-201ENST00000266058 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
SLIT1-201ENST00000266058 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
SLIT1-201ENST00000266058 APBB1O00213 710 aa17.97■□□□□ 0.47
SLIT1-201ENST00000266058 TAF7LQ5H9L4 462 aa17.97■□□□□ 0.47
SLIT1-201ENST00000266058 DCAF11Q8TEB1 546 aa17.96■□□□□ 0.47
SLIT1-201ENST00000266058 SETQ01105 290 aaPredicted RBP17.95■□□□□ 0.46
SLIT1-201ENST00000266058 TMF1P82094 1093 aa17.95■□□□□ 0.46
SLIT1-201ENST00000266058 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
SLIT1-201ENST00000266058 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
SLIT1-201ENST00000266058 SAFB2Q14151 953 aaKnown RBP eCLIP17.94■□□□□ 0.46
SLIT1-201ENST00000266058 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
SLIT1-201ENST00000266058 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
SLIT1-201ENST00000266058 GZF1Q9H116 711 aaPredicted RBP17.91■□□□□ 0.46
SLIT1-201ENST00000266058 MORC1Q86VD1 984 aa17.91■□□□□ 0.46
SLIT1-201ENST00000266058 PTMSP20962 102 aa17.9■□□□□ 0.46
SLIT1-201ENST00000266058 EEA1Q15075 1411 aa17.88■□□□□ 0.45
SLIT1-201ENST00000266058 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
SLIT1-201ENST00000266058 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
SLIT1-201ENST00000266058 HSP90B1P14625 803 aaKnown RBP17.87■□□□□ 0.45
SLIT1-201ENST00000266058 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
SLIT1-201ENST00000266058 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
SLIT1-201ENST00000266058 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
SLIT1-201ENST00000266058 MLECQ14165 292 aa17.85■□□□□ 0.45
SLIT1-201ENST00000266058 RASSF8Q8NHQ8 419 aa17.85■□□□□ 0.45
SLIT1-201ENST00000266058 KIF27Q86VH2 1401 aa17.83■□□□□ 0.44
SLIT1-201ENST00000266058 PES1O00541 588 aaKnown RBP17.83■□□□□ 0.44
SLIT1-201ENST00000266058 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
SLIT1-201ENST00000266058 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
SLIT1-201ENST00000266058 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
SLIT1-201ENST00000266058 STK26Q9P289 416 aa17.82■□□□□ 0.44
SLIT1-201ENST00000266058 CFAP44Q96MT7 982 aa17.81■□□□□ 0.44
SLIT1-201ENST00000266058 CEP164Q9UPV0 1460 aa17.81■□□□□ 0.44
SLIT1-201ENST00000266058 ITPRIPQ8IWB1 547 aa17.81■□□□□ 0.44
SLIT1-201ENST00000266058 APPP05067 770 aa17.81■□□□□ 0.44
SLIT1-201ENST00000266058 KANK1Q14678 1352 aa17.8■□□□□ 0.44
SLIT1-201ENST00000266058 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
SLIT1-201ENST00000266058 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
SLIT1-201ENST00000266058 TPM4P67936 248 aa17.78■□□□□ 0.44
SLIT1-201ENST00000266058 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
SLIT1-201ENST00000266058 KAT6BQ8WYB5 2073 aa17.77■□□□□ 0.44
SLIT1-201ENST00000266058 KTN1Q86UP2 1357 aaKnown RBP17.77■□□□□ 0.43
SLIT1-201ENST00000266058 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
SLIT1-201ENST00000266058 RCAN3Q9UKA8 241 aa17.76■□□□□ 0.43
SLIT1-201ENST00000266058 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
SLIT1-201ENST00000266058 CCER2I3L3R5 266 aa17.75■□□□□ 0.43
SLIT1-201ENST00000266058 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
SLIT1-201ENST00000266058 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
SLIT1-201ENST00000266058 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
SLIT1-201ENST00000266058 FOXD1Q16676 465 aa17.74■□□□□ 0.43
SLIT1-201ENST00000266058 CCAR2Q8N163 923 aaKnown RBP17.74■□□□□ 0.43
SLIT1-201ENST00000266058 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
SLIT1-201ENST00000266058 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
SLIT1-201ENST00000266058 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
SLIT1-201ENST00000266058 RWDD1Q9H446 243 aaPredicted RBP17.73■□□□□ 0.43
SLIT1-201ENST00000266058 MARCH6O60337 910 aa17.73■□□□□ 0.43
SLIT1-201ENST00000266058 HDGFP51858 240 aaKnown RBP17.72■□□□□ 0.43
SLIT1-201ENST00000266058 HDGFL2Q7Z4V5 671 aaPredicted RBP17.72■□□□□ 0.43
SLIT1-201ENST00000266058 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
SLIT1-201ENST00000266058 SYAP1Q96A49 352 aaPredicted RBP17.71■□□□□ 0.43
SLIT1-201ENST00000266058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.71■□□□□ 0.43
SLIT1-201ENST00000266058 TPM3P06753 285 aa17.71■□□□□ 0.43
SLIT1-201ENST00000266058 TRIM6-TRIM34B2RNG4 842 aa17.71■□□□□ 0.43
SLIT1-201ENST00000266058 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
SLIT1-201ENST00000266058 HTATSF1O43719 755 aaKnown RBP17.7■□□□□ 0.42
SLIT1-201ENST00000266058 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
SLIT1-201ENST00000266058 CSB-PGBD3P0DP91 1061 aa17.7■□□□□ 0.42
SLIT1-201ENST00000266058 NOL8Q76FK4 1167 aaKnown RBP17.7■□□□□ 0.42
SLIT1-201ENST00000266058 MSH5O43196 834 aa17.69■□□□□ 0.42
SLIT1-201ENST00000266058 CWC22Q9HCG8 908 aaKnown RBP17.69■□□□□ 0.42
SLIT1-201ENST00000266058 GGT6Q6P531 493 aa17.69■□□□□ 0.42
SLIT1-201ENST00000266058 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
SLIT1-201ENST00000266058 TCEAL9Q9UHQ7 104 aa17.68■□□□□ 0.42
SLIT1-201ENST00000266058 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
SLIT1-201ENST00000266058 GOLGA6L3A6NEY3 463 aa17.67■□□□□ 0.42
SLIT1-201ENST00000266058 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
SLIT1-201ENST00000266058 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
SLIT1-201ENST00000266058 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
SLIT1-201ENST00000266058 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
SLIT1-201ENST00000266058 ROCK2O75116 1388 aaKnown RBP17.67■□□□□ 0.42
SLIT1-201ENST00000266058 PKD2Q13563 968 aa17.67■□□□□ 0.42
SLIT1-201ENST00000266058 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
SLIT1-201ENST00000266058 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
SLIT1-201ENST00000266058 TPD52L1Q16890 204 aaPredicted RBP17.66■□□□□ 0.42
SLIT1-201ENST00000266058 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
SLIT1-201ENST00000266058 PMFBP1Q8TBY8 1022 aa17.64■□□□□ 0.42
SLIT1-201ENST00000266058 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
SLIT1-201ENST00000266058 GPATCH3Q96I76 525 aa17.64■□□□□ 0.41
SLIT1-201ENST00000266058 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
SLIT1-201ENST00000266058 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
SLIT1-201ENST00000266058 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
SLIT1-201ENST00000266058 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
SLIT1-201ENST00000266058 FOXD4L5Q5VV16 416 aaPredicted RBP17.62■□□□□ 0.41
SLIT1-201ENST00000266058 FOXD4L4Q8WXT5 416 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms