RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 ARHGAP5Q13017 1502 aa37.47■■■■□ 3.59
SCN1B-201ENST00000262631 ARAP3Q8WWN8 1544 aa37.44■■■■□ 3.58
SCN1B-201ENST00000262631 MIA2Q96PC5 1412 aa37.43■■■■□ 3.58
SCN1B-201ENST00000262631 ZNF644Q9H582 1327 aaPredicted RBP37.42■■■■□ 3.58
SCN1B-201ENST00000262631 ZNF777Q9ULD5 760 aaPredicted RBP37.41■■■■□ 3.58
SCN1B-201ENST00000262631 FANCAO15360 1455 aa37.4■■■■□ 3.58
SCN1B-201ENST00000262631 EFCAB2Q5VUJ9 269 aa37.4■■■■□ 3.58
SCN1B-201ENST00000262631 PPRC1Q5VV67 1664 aaKnown RBP37.4■■■■□ 3.58
SCN1B-201ENST00000262631 TSPOAP1O95153 1857 aa37.39■■■■□ 3.58
SCN1B-201ENST00000262631 RRBP1Q9P2E9 1410 aaKnown RBP37.38■■■■□ 3.57
SCN1B-201ENST00000262631 PTPN23Q9H3S7 1636 aa37.35■■■■□ 3.57
SCN1B-201ENST00000262631 SAMD9LQ8IVG5 1584 aa37.34■■■■□ 3.57
SCN1B-201ENST00000262631 CAMSAP2Q08AD1 1489 aa37.32■■■■□ 3.56
SCN1B-201ENST00000262631 TCOF1Q13428 1488 aaKnown RBP37.31■■■■□ 3.56
SCN1B-201ENST00000262631 FAM50AQ14320 339 aaKnown RBP37.3■■■■□ 3.56
SCN1B-201ENST00000262631 AKNAQ7Z591 1439 aa37.28■■■■□ 3.56
SCN1B-201ENST00000262631 TEX14Q8IWB6 1497 aa37.28■■■■□ 3.56
SCN1B-201ENST00000262631 NEO1Q92859 1461 aa37.27■■■■□ 3.56
SCN1B-201ENST00000262631 CFAP74Q9C0B2 1584 aa37.24■■■■□ 3.55
SCN1B-201ENST00000262631 ARHGEF12Q9NZN5 1544 aa37.23■■■■□ 3.55
SCN1B-201ENST00000262631 ABCC1P33527 1531 aa37.22■■■■□ 3.55
SCN1B-201ENST00000262631 ADGRL1O94910 1474 aa37.22■■■■□ 3.55
SCN1B-201ENST00000262631 HNRNPMP52272 730 aaKnown RBP eCLIP37.21■■■■□ 3.55
SCN1B-201ENST00000262631 SYCP2Q9BX26 1530 aa37.2■■■■□ 3.55
SCN1B-201ENST00000262631 KIAA1107Q9UPP5 1409 aa37.19■■■■□ 3.54
SCN1B-201ENST00000262631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.19■■■■□ 3.54
SCN1B-201ENST00000262631 PLEKHH2Q8IVE3 1493 aa37.18■■■■□ 3.54
SCN1B-201ENST00000262631 SCAPERQ9BY12 1400 aa37.18■■■■□ 3.54
SCN1B-201ENST00000262631 MBD5Q9P267 1494 aa37.18■■■■□ 3.54
SCN1B-201ENST00000262631 TRAPPC8Q9Y2L5 1435 aa37.12■■■■□ 3.53
SCN1B-201ENST00000262631 TRIM26Q12899 539 aaPredicted RBP37.11■■■■□ 3.53
SCN1B-201ENST00000262631 ITGAEP38570 1179 aa37.09■■■■□ 3.53
SCN1B-201ENST00000262631 COL17A1Q9UMD9 1497 aaPredicted RBP37.08■■■■□ 3.53
SCN1B-201ENST00000262631 AFAP1Q8N556 730 aa37.08■■■■□ 3.53
SCN1B-201ENST00000262631 ABCC5O15440 1437 aa37.08■■■■□ 3.53
SCN1B-201ENST00000262631 ARHGEF5Q12774 1597 aa37.06■■■■□ 3.52
SCN1B-201ENST00000262631 RAPGEF3O95398 923 aa37.06■■■■□ 3.52
SCN1B-201ENST00000262631 DAPK1P53355 1430 aa37.06■■■■□ 3.52
SCN1B-201ENST00000262631 DNMT1P26358 1616 aaKnown RBP37.05■■■■□ 3.52
SCN1B-201ENST00000262631 DENND4BO75064 1496 aaPredicted RBP37.05■■■■□ 3.52
SCN1B-201ENST00000262631 POGZQ7Z3K3 1410 aa37.04■■■■□ 3.52
SCN1B-201ENST00000262631 CCDC141Q6ZP82 1450 aa37.04■■■■□ 3.52
SCN1B-201ENST00000262631 PTPRKQ15262 1439 aa37.04■■■■□ 3.52
SCN1B-201ENST00000262631 RSPH4AQ5TD94 716 aa37.01■■■■□ 3.52
SCN1B-201ENST00000262631 ZNF518AQ6AHZ1 1483 aa36.99■■■■□ 3.51
SCN1B-201ENST00000262631 FRMPD1Q5SYB0 1578 aa36.97■■■■□ 3.51
SCN1B-201ENST00000262631 RICTORQ6R327 1708 aa36.95■■■■□ 3.51
SCN1B-201ENST00000262631 CHIC2Q9UKJ5 165 aa36.94■■■■□ 3.5
SCN1B-201ENST00000262631 CROCC2H7BZ55 1655 aa36.93■■■■□ 3.5
SCN1B-201ENST00000262631 TSPY4P0CV99 314 aa36.93■■■■□ 3.5
SCN1B-201ENST00000262631 TSPY10P0CW01 314 aa36.93■■■■□ 3.5
SCN1B-201ENST00000262631 KDM5CP41229 1560 aa36.92■■■■□ 3.5
SCN1B-201ENST00000262631 C9orf84Q5VXU9 1444 aa36.91■■■■□ 3.5
SCN1B-201ENST00000262631 SHANK2Q9UPX8 1470 aa36.91■■■■□ 3.5
SCN1B-201ENST00000262631 SPAG9O60271 1321 aaKnown RBP36.89■■■■□ 3.5
SCN1B-201ENST00000262631 KDM6BO15054 1643 aa36.89■■■■□ 3.5
SCN1B-201ENST00000262631 PCGF6Q9BYE7 350 aa36.84■■■■□ 3.49
SCN1B-201ENST00000262631 ZFYVE16Q7Z3T8 1539 aa36.84■■■■□ 3.49
SCN1B-201ENST00000262631 MAST1Q9Y2H9 1570 aa36.84■■■■□ 3.49
SCN1B-201ENST00000262631 INO80Q9ULG1 1556 aaPredicted RBP36.82■■■■□ 3.48
SCN1B-201ENST00000262631 ZMYM4Q5VZL5 1548 aa36.82■■■■□ 3.48
SCN1B-201ENST00000262631 MLH3Q9UHC1 1453 aa36.81■■■■□ 3.48
SCN1B-201ENST00000262631 RTEL1-TNFRSF6BF6WH68 1400 aa36.8■■■■□ 3.48
SCN1B-201ENST00000262631 HECW2Q9P2P5 1572 aa36.8■■■■□ 3.48
SCN1B-201ENST00000262631 ATP7AQ04656 1500 aa36.8■■■■□ 3.48
SCN1B-201ENST00000262631 MYT1LQ9UL68 1186 aa36.79■■■■□ 3.48
SCN1B-201ENST00000262631 ADGRL2O95490 1459 aa36.79■■■■□ 3.48
SCN1B-201ENST00000262631 NCOA1Q15788 1441 aa36.78■■■■□ 3.48
SCN1B-201ENST00000262631 KIDINS220Q9ULH0 1771 aa36.78■■■■□ 3.48
SCN1B-201ENST00000262631 RRP7BPQ9NSQ0 103 aa36.77■■■■□ 3.48
SCN1B-201ENST00000262631 ROCK1Q13464 1354 aa36.76■■■■□ 3.48
SCN1B-201ENST00000262631 YEATS2Q9ULM3 1422 aa36.75■■■■□ 3.47
SCN1B-201ENST00000262631 ANKRD30AQ9BXX3 1397 aa36.75■■■■□ 3.47
SCN1B-201ENST00000262631 ADGBQ8N7X0 1667 aa36.73■■■■□ 3.47
SCN1B-201ENST00000262631 MAGI2Q86UL8 1455 aa36.71■■■■□ 3.47
SCN1B-201ENST00000262631 KIF15Q9NS87 1388 aa36.7■■■■□ 3.47
SCN1B-201ENST00000262631 PLXNC1O60486 1568 aa36.7■■■■□ 3.46
SCN1B-201ENST00000262631 ABCA6Q8N139 1617 aa36.68■■■■□ 3.46
SCN1B-201ENST00000262631 HFM1A2PYH4 1435 aa36.66■■■■□ 3.46
SCN1B-201ENST00000262631 NAIPQ13075 1403 aa36.66■■■■□ 3.46
SCN1B-201ENST00000262631 DIP2CQ9Y2E4 1556 aa36.65■■■■□ 3.46
SCN1B-201ENST00000262631 ARHGEF40Q8TER5 1519 aa36.61■■■■□ 3.45
SCN1B-201ENST00000262631 DUOX2Q9NRD8 1548 aa36.57■■■■□ 3.44
SCN1B-201ENST00000262631 ATP10AO60312 1499 aa36.56■■■■□ 3.44
SCN1B-201ENST00000262631 A2MP01023 1474 aa36.56■■■■□ 3.44
SCN1B-201ENST00000262631 ANKRD50Q9ULJ7 1429 aa36.55■■■■□ 3.44
SCN1B-201ENST00000262631 GCC2Q8IWJ2 1684 aa36.54■■■■□ 3.44
SCN1B-201ENST00000262631 DHX29Q7Z478 1369 aaKnown RBP36.54■■■■□ 3.44
SCN1B-201ENST00000262631 SETD5Q9C0A6 1442 aa36.54■■■■□ 3.44
SCN1B-201ENST00000262631 ERBINQ96RT1 1412 aa36.48■■■■□ 3.43
SCN1B-201ENST00000262631 RAB3GAP2Q9H2M9 1393 aa36.48■■■■□ 3.43
SCN1B-201ENST00000262631 REREQ9P2R6 1566 aa36.44■■■■□ 3.42
SCN1B-201ENST00000262631 SIGLEC1Q9BZZ2 1709 aa36.44■■■■□ 3.42
SCN1B-201ENST00000262631 KIF3BO15066 747 aa36.4■■■■□ 3.42
SCN1B-201ENST00000262631 EIF2AK4Q9P2K8 1649 aaKnown RBP36.35■■■■□ 3.41
SCN1B-201ENST00000262631 AGLP35573 1532 aa36.34■■■■□ 3.41
SCN1B-201ENST00000262631 BCORL1Q5H9F3 1711 aa36.29■■■■□ 3.4
SCN1B-201ENST00000262631 ARID4BQ4LE39 1312 aaPredicted RBP36.29■■■■□ 3.4
SCN1B-201ENST00000262631 HRCP23327 699 aa36.29■■■■□ 3.4
SCN1B-201ENST00000262631 GGT6Q6P531 493 aa36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms