RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MAGI2Q86UL8 1455 aa19.81■□□□□ 0.76
TRAF4-202ENST00000262396 RICTORQ6R327 1708 aa19.81■□□□□ 0.76
TRAF4-202ENST00000262396 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
TRAF4-202ENST00000262396 BCORL1Q5H9F3 1711 aa19.8■□□□□ 0.76
TRAF4-202ENST00000262396 ARHGAP5Q13017 1502 aa19.8■□□□□ 0.76
TRAF4-202ENST00000262396 YEATS2Q9ULM3 1422 aa19.78■□□□□ 0.76
TRAF4-202ENST00000262396 MADDQ8WXG6 1647 aa19.78■□□□□ 0.76
TRAF4-202ENST00000262396 MYO5CQ9NQX4 1742 aa19.77■□□□□ 0.76
TRAF4-202ENST00000262396 ZMYM4Q5VZL5 1548 aa19.76■□□□□ 0.75
TRAF4-202ENST00000262396 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
TRAF4-202ENST00000262396 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
TRAF4-202ENST00000262396 RIMS1Q86UR5 1692 aaKnown RBP19.74■□□□□ 0.75
TRAF4-202ENST00000262396 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
TRAF4-202ENST00000262396 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
TRAF4-202ENST00000262396 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
TRAF4-202ENST00000262396 ATP10AO60312 1499 aa19.73■□□□□ 0.75
TRAF4-202ENST00000262396 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
TRAF4-202ENST00000262396 C9orf84Q5VXU9 1444 aa19.71■□□□□ 0.75
TRAF4-202ENST00000262396 PCF11O94913 1555 aaKnown RBP19.7■□□□□ 0.74
TRAF4-202ENST00000262396 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
TRAF4-202ENST00000262396 HSPA2P54652 639 aa19.66■□□□□ 0.74
TRAF4-202ENST00000262396 LMTK3Q96Q04 1460 aa19.62■□□□□ 0.73
TRAF4-202ENST00000262396 LRRIQ1Q96JM4 1722 aa19.62■□□□□ 0.73
TRAF4-202ENST00000262396 MTUS2Q5JR59 1369 aa19.61■□□□□ 0.73
TRAF4-202ENST00000262396 FER1L4A9Z1Z3 1794 aa19.61■□□□□ 0.73
TRAF4-202ENST00000262396 CEBPAP49715 358 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-202ENST00000262396 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-202ENST00000262396 PREX2Q70Z35 1606 aa19.58■□□□□ 0.73
TRAF4-202ENST00000262396 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.73
TRAF4-202ENST00000262396 FBXO41Q8TF61 875 aa19.58■□□□□ 0.72
TRAF4-202ENST00000262396 TRAPPC8Q9Y2L5 1435 aa19.58■□□□□ 0.72
TRAF4-202ENST00000262396 CDC42BPBQ9Y5S2 1711 aa19.57■□□□□ 0.72
TRAF4-202ENST00000262396 KDM5CP41229 1560 aa19.57■□□□□ 0.72
TRAF4-202ENST00000262396 SIGLEC1Q9BZZ2 1709 aa19.56■□□□□ 0.72
TRAF4-202ENST00000262396 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
TRAF4-202ENST00000262396 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
TRAF4-202ENST00000262396 MLH3Q9UHC1 1453 aa19.56■□□□□ 0.72
TRAF4-202ENST00000262396 HNRNPMP52272 730 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAF4-202ENST00000262396 ABCC1P33527 1531 aa19.56■□□□□ 0.72
TRAF4-202ENST00000262396 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
TRAF4-202ENST00000262396 ITSN2Q9NZM3 1697 aa19.51■□□□□ 0.71
TRAF4-202ENST00000262396 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
TRAF4-202ENST00000262396 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
TRAF4-202ENST00000262396 PLEKHH2Q8IVE3 1493 aa19.5■□□□□ 0.71
TRAF4-202ENST00000262396 CDC42BPAQ5VT25 1732 aa19.5■□□□□ 0.71
TRAF4-202ENST00000262396 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
TRAF4-202ENST00000262396 ABCA6Q8N139 1617 aa19.49■□□□□ 0.71
TRAF4-202ENST00000262396 SYCP2Q9BX26 1530 aa19.48■□□□□ 0.71
TRAF4-202ENST00000262396 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
TRAF4-202ENST00000262396 REREQ9P2R6 1566 aa19.47■□□□□ 0.71
TRAF4-202ENST00000262396 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
TRAF4-202ENST00000262396 AGLP35573 1532 aa19.45■□□□□ 0.7
TRAF4-202ENST00000262396 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
TRAF4-202ENST00000262396 PREX1Q8TCU6 1659 aa19.44■□□□□ 0.7
TRAF4-202ENST00000262396 GGT6Q6P531 493 aa19.44■□□□□ 0.7
TRAF4-202ENST00000262396 KIAA1107Q9UPP5 1409 aa19.43■□□□□ 0.7
TRAF4-202ENST00000262396 EHBP1L1Q8N3D4 1523 aa19.42■□□□□ 0.7
TRAF4-202ENST00000262396 KIDINS220Q9ULH0 1771 aa19.42■□□□□ 0.7
TRAF4-202ENST00000262396 CERKQ8TCT0 537 aa19.41■□□□□ 0.7
TRAF4-202ENST00000262396 ATP7AQ04656 1500 aa19.4■□□□□ 0.7
TRAF4-202ENST00000262396 ZNF644Q9H582 1327 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-202ENST00000262396 A2MP01023 1474 aa19.38■□□□□ 0.69
TRAF4-202ENST00000262396 ZMYM3Q14202 1370 aa19.36■□□□□ 0.69
TRAF4-202ENST00000262396 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
TRAF4-202ENST00000262396 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
TRAF4-202ENST00000262396 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
TRAF4-202ENST00000262396 C3P01024 1663 aa19.35■□□□□ 0.69
TRAF4-202ENST00000262396 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
TRAF4-202ENST00000262396 TSPY4P0CV99 314 aa19.33■□□□□ 0.68
TRAF4-202ENST00000262396 TSPY10P0CW01 314 aa19.33■□□□□ 0.68
TRAF4-202ENST00000262396 RSPH4AQ5TD94 716 aa19.33■□□□□ 0.68
TRAF4-202ENST00000262396 APLP2Q06481 763 aa19.32■□□□□ 0.68
TRAF4-202ENST00000262396 NCOA2Q15596 1464 aa19.3■□□□□ 0.68
TRAF4-202ENST00000262396 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
TRAF4-202ENST00000262396 INO80Q9ULG1 1556 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-202ENST00000262396 NPATQ14207 1427 aa19.29■□□□□ 0.68
TRAF4-202ENST00000262396 KIF3BO15066 747 aa19.29■□□□□ 0.68
TRAF4-202ENST00000262396 RTEL1-TNFRSF6BF6WH68 1400 aa19.27■□□□□ 0.68
TRAF4-202ENST00000262396 VPS8Q8N3P4 1428 aa19.27■□□□□ 0.68
TRAF4-202ENST00000262396 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.67
TRAF4-202ENST00000262396 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
TRAF4-202ENST00000262396 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
TRAF4-202ENST00000262396 MBD5Q9P267 1494 aa19.26■□□□□ 0.67
TRAF4-202ENST00000262396 ADGBQ8N7X0 1667 aa19.26■□□□□ 0.67
TRAF4-202ENST00000262396 PTPRTO14522 1441 aa19.25■□□□□ 0.67
TRAF4-202ENST00000262396 MROH2AA6NES4 1674 aa19.25■□□□□ 0.67
TRAF4-202ENST00000262396 CLTCQ00610 1675 aaKnown RBP19.25■□□□□ 0.67
TRAF4-202ENST00000262396 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
TRAF4-202ENST00000262396 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
TRAF4-202ENST00000262396 NCKAP5LQ9HCH0 1330 aa19.23■□□□□ 0.67
TRAF4-202ENST00000262396 STRCQ7RTU9 1775 aa19.22■□□□□ 0.67
TRAF4-202ENST00000262396 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
TRAF4-202ENST00000262396 CAMSAP1Q5T5Y3 1602 aa19.21■□□□□ 0.67
TRAF4-202ENST00000262396 LRRC9Q6ZRR7 1453 aa19.21■□□□□ 0.67
TRAF4-202ENST00000262396 PKD2Q13563 968 aa19.2■□□□□ 0.66
TRAF4-202ENST00000262396 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
TRAF4-202ENST00000262396 KANK4Q5T7N3 995 aaPredicted RBP19.16■□□□□ 0.66
TRAF4-202ENST00000262396 TNRQ92752 1358 aa19.15■□□□□ 0.66
TRAF4-202ENST00000262396 FBXO31Q5XUX0 539 aaPredicted RBP19.14■□□□□ 0.65
TRAF4-202ENST00000262396 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms