RNA–Protein interactions for RNA: ENST00000261173.6

ATP2B1-201, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B1, Length 6,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-201ENST00000261173 SLC4A3P48751 1232 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 ZFP91Q96JP5 570 aaPredicted RBP3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 BACH2Q9BYV9 841 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 PRDM10Q9NQV6 1147 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 UPF2Q9HAU5 1272 aaKnown RBP3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 NACADO15069 1562 aa3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 KIF20AO95235 890 aa3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 ZNF771Q7L3S4 317 aaPredicted RBP3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 DMTNQ08495 405 aa3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 PTMAP06454 111 aaKnown RBP3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 TNNT3P45378 269 aaPredicted RBP3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 CSPP1Q1MSJ5 1256 aa3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 NUDCQ9Y266 331 aa3.97□□□□□ -1.77
ATP2B1-201ENST00000261173 VGLL3A8MV65 326 aa3.96□□□□□ -1.77
ATP2B1-201ENST00000261173 DNAJC2Q99543 621 aaKnown RBP3.96□□□□□ -1.77
ATP2B1-201ENST00000261173 HIRIP3Q9BW71 556 aaPredicted RBP3.96□□□□□ -1.77
ATP2B1-201ENST00000261173 GZF1Q9H116 711 aaPredicted RBP3.96□□□□□ -1.77
ATP2B1-201ENST00000261173 PATL2C9JE40 543 aaKnown RBP3.96□□□□□ -1.78
ATP2B1-201ENST00000261173 AXDND1Q5T1B0 1012 aaPredicted RBP3.96□□□□□ -1.78
ATP2B1-201ENST00000261173 SIN3AQ96ST3 1273 aa3.96□□□□□ -1.78
ATP2B1-201ENST00000261173 R3HCC1Q9Y3T6 440 aaKnown RBP3.96□□□□□ -1.78
ATP2B1-201ENST00000261173 CLGNO14967 610 aa3.96□□□□□ -1.78
ATP2B1-201ENST00000261173 ISY1Q9ULR0 285 aaKnown RBP3.96□□□□□ -1.78
ATP2B1-201ENST00000261173 UQCRHLA0A096LP55 91 aa3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 UQCRHP07919 91 aa3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 CCDC66A2RUB6 948 aa3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 TERF1P54274 439 aa3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 POGKQ9P215 609 aa3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 WWC1Q8IX03 1113 aa3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 SECISBP2LQ93073 1101 aaKnown RBP3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 CCDC94Q9BW85 323 aaPredicted RBP3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 MAPK8IP2Q13387 824 aaPredicted RBP3.95□□□□□ -1.78
ATP2B1-201ENST00000261173 TONSLQ96HA7 1378 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 BAZ1BQ9UIG0 1483 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 DYNC1I1O14576 645 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 TSPYL1Q9H0U9 437 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 DDX11L8A8MPP1 907 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 CCDC173Q0VFZ6 552 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 FAM161AQ3B820 660 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 GRPEL1Q9HAV7 217 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 E9PSI1 815 aa3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 XRCC6P12956 609 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 SMG6Q86US8 1419 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 CGNQ9P2M7 1197 aaKnown RBP3.94□□□□□ -1.78
ATP2B1-201ENST00000261173 SLKQ9H2G2 1235 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 EIF4G1Q04637 1599 aaKnown RBP3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 AEBP1Q8IUX7 1158 aa3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 GOLGA3Q08378 1498 aa3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 VGFO15240 615 aaPredicted RBP3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 GOLGA6L22H0YM25 854 aa3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 CC2D1BQ5T0F9 858 aaKnown RBP3.93□□□□□ -1.78
ATP2B1-201ENST00000261173 CLIP1P30622 1438 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 RB1CC1Q8TDY2 1594 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 OFD1O75665 1012 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 ZSCAN30Q86W11 494 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 CNPY4Q8N129 248 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 SAMD1Q6SPF0 538 aaPredicted RBP3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 ZNF622Q969S3 477 aaKnown RBP eCLIP3.92□□□□□ -1.782e-6■■■□□ 15.4
ATP2B1-201ENST00000261173 HDAC5Q9UQL6 1122 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 FAM193AP78312 1265 aa3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 CHAF1AQ13111 956 aaPredicted RBP3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 ZNF830Q96NB3 372 aaPredicted RBP3.92□□□□□ -1.78
ATP2B1-201ENST00000261173 CBX1P83916 185 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 SKOR2Q2VWA4 1001 aaPredicted RBP3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 AKNAQ7Z591 1439 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 RRP1P56182 461 aaKnown RBP3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 SASS6Q6UVJ0 657 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 TMEM51Q9NW97 253 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 TRAK2O60296 914 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 EXOC6Q8TAG9 804 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 GBP4Q96PP9 640 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 CEP164Q9UPV0 1460 aa3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 KTN1Q86UP2 1357 aaKnown RBP3.91□□□□□ -1.78
ATP2B1-201ENST00000261173 KCNJ4P48050 445 aa3.9□□□□□ -1.78
ATP2B1-201ENST00000261173 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.9□□□□□ -1.78
ATP2B1-201ENST00000261173 PANK2Q9BZ23 570 aa3.9□□□□□ -1.78
ATP2B1-201ENST00000261173 KIF3AQ9Y496 699 aa3.9□□□□□ -1.78
ATP2B1-201ENST00000261173 RCAN3Q9UKA8 241 aa3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 CCDC9Q9Y3X0 531 aaKnown RBP3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 TMC1Q8TDI8 760 aa3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 TIGD1Q96MW7 591 aa3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 RSF1Q96T23 1441 aaPredicted RBP3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 NBPF1Q3BBV0 1214 aa3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 CNKSR2Q8WXI2 1034 aa3.9□□□□□ -1.79
ATP2B1-201ENST00000261173 NASPP49321 788 aaPredicted RBP3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 CENPQQ7L2Z9 268 aaPredicted RBP3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 VPS8Q8N3P4 1428 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 CALRP27797 417 aaKnown RBP3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 CALCOCO1Q9P1Z2 691 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 HMGN5P82970 282 aaKnown RBP3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 NCAPD3P42695 1498 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 WDR97A6NE52 1622 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 PLPPR3Q6T4P5 718 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 GOLGA6L6A8MZA4 724 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 EIF4G2P78344 907 aaKnown RBP eCLIP3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 KIAA2012Q0VF49 1180 aa3.89□□□□□ -1.79
ATP2B1-201ENST00000261173 CCDC39Q9UFE4 941 aa3.88□□□□□ -1.79
ATP2B1-201ENST00000261173 CHMP5Q9NZZ3 219 aa3.88□□□□□ -1.79
ATP2B1-201ENST00000261173 FBXO3Q9UK99 471 aa3.88□□□□□ -1.79
ATP2B1-201ENST00000261173 ABCC9O60706 1549 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms