RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 NEUROD1Q13562 356 aa18.35■□□□□ 0.53
DDB2-201ENST00000256996 WDR7Q9Y4E6 1490 aa18.35■□□□□ 0.53
DDB2-201ENST00000256996 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
DDB2-201ENST00000256996 GTF3C3Q9Y5Q9 886 aa18.33■□□□□ 0.53
DDB2-201ENST00000256996 ASXL2Q76L83 1435 aa18.33■□□□□ 0.53
DDB2-201ENST00000256996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.52
DDB2-201ENST00000256996 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.52
DDB2-201ENST00000256996 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
DDB2-201ENST00000256996 PTPRKQ15262 1439 aa18.3■□□□□ 0.52
DDB2-201ENST00000256996 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
DDB2-201ENST00000256996 TTC37Q6PGP7 1564 aa18.29■□□□□ 0.52
DDB2-201ENST00000256996 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
DDB2-201ENST00000256996 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
DDB2-201ENST00000256996 PLCH2O75038 1416 aa18.25■□□□□ 0.51
DDB2-201ENST00000256996 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
DDB2-201ENST00000256996 ABCC5O15440 1437 aa18.24■□□□□ 0.51
DDB2-201ENST00000256996 DAPK1P53355 1430 aa18.23■□□□□ 0.51
DDB2-201ENST00000256996 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
DDB2-201ENST00000256996 ARHGAP5Q13017 1502 aa18.22■□□□□ 0.51
DDB2-201ENST00000256996 CDC42BPBQ9Y5S2 1711 aa18.21■□□□□ 0.51
DDB2-201ENST00000256996 MAPKBP1O60336 1514 aa18.2■□□□□ 0.5
DDB2-201ENST00000256996 HFM1A2PYH4 1435 aa18.2■□□□□ 0.5
DDB2-201ENST00000256996 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
DDB2-201ENST00000256996 EFCAB2Q5VUJ9 269 aa18.2■□□□□ 0.5
DDB2-201ENST00000256996 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
DDB2-201ENST00000256996 DNMT1P26358 1616 aaKnown RBP18.2■□□□□ 0.5
DDB2-201ENST00000256996 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
DDB2-201ENST00000256996 MYO5CQ9NQX4 1742 aa18.18■□□□□ 0.5
DDB2-201ENST00000256996 ARAP3Q8WWN8 1544 aa18.18■□□□□ 0.5
DDB2-201ENST00000256996 MBD5Q9P267 1494 aa18.18■□□□□ 0.5
DDB2-201ENST00000256996 SAMD9LQ8IVG5 1584 aa18.18■□□□□ 0.5
DDB2-201ENST00000256996 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.52e-9■■□□□ 11.6
DDB2-201ENST00000256996 NAIPQ13075 1403 aa18.17■□□□□ 0.5
DDB2-201ENST00000256996 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
DDB2-201ENST00000256996 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
DDB2-201ENST00000256996 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
DDB2-201ENST00000256996 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
DDB2-201ENST00000256996 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
DDB2-201ENST00000256996 RRP7BPQ9NSQ0 103 aa18.15■□□□□ 0.5
DDB2-201ENST00000256996 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
DDB2-201ENST00000256996 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
DDB2-201ENST00000256996 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
DDB2-201ENST00000256996 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
DDB2-201ENST00000256996 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
DDB2-201ENST00000256996 FANCAO15360 1455 aa18.12■□□□□ 0.49
DDB2-201ENST00000256996 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
DDB2-201ENST00000256996 NCOA1Q15788 1441 aa18.11■□□□□ 0.49
DDB2-201ENST00000256996 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
DDB2-201ENST00000256996 CCDC141Q6ZP82 1450 aa18.11■□□□□ 0.49
DDB2-201ENST00000256996 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
DDB2-201ENST00000256996 DHX57Q6P158 1386 aaKnown RBP18.1■□□□□ 0.49
DDB2-201ENST00000256996 ILDR1Q86SU0 546 aaPredicted RBP18.1■□□□□ 0.49
DDB2-201ENST00000256996 ADGRL2O95490 1459 aa18.1■□□□□ 0.49
DDB2-201ENST00000256996 ARHGEF12Q9NZN5 1544 aa18.1■□□□□ 0.49
DDB2-201ENST00000256996 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
DDB2-201ENST00000256996 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
DDB2-201ENST00000256996 ABCC1P33527 1531 aa18.08■□□□□ 0.48
DDB2-201ENST00000256996 CROCC2H7BZ55 1655 aa18.07■□□□□ 0.48
DDB2-201ENST00000256996 GLI2P10070 1586 aa18.04■□□□□ 0.48
DDB2-201ENST00000256996 FAM69CQ0P6D2 419 aa18.04■□□□□ 0.48
DDB2-201ENST00000256996 TRAPPC8Q9Y2L5 1435 aa18.04■□□□□ 0.48
DDB2-201ENST00000256996 GCC2Q8IWJ2 1684 aa18.04■□□□□ 0.48
DDB2-201ENST00000256996 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
DDB2-201ENST00000256996 SCAPERQ9BY12 1400 aa18.02■□□□□ 0.47
DDB2-201ENST00000256996 AFAP1Q8N556 730 aa18.01■□□□□ 0.47
DDB2-201ENST00000256996 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
DDB2-201ENST00000256996 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
DDB2-201ENST00000256996 KIF15Q9NS87 1388 aa18■□□□□ 0.47
DDB2-201ENST00000256996 MAST1Q9Y2H9 1570 aa18■□□□□ 0.47
DDB2-201ENST00000256996 KDM6BO15054 1643 aa18■□□□□ 0.47
DDB2-201ENST00000256996 MAP3K4Q9Y6R4 1608 aa17.99■□□□□ 0.47
DDB2-201ENST00000256996 NEO1Q92859 1461 aa17.99■□□□□ 0.47
DDB2-201ENST00000256996 ANKRD50Q9ULJ7 1429 aa17.98■□□□□ 0.47
DDB2-201ENST00000256996 KIF13AQ9H1H9 1805 aa17.98■□□□□ 0.47
DDB2-201ENST00000256996 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
DDB2-201ENST00000256996 CFAP74Q9C0B2 1584 aa17.97■□□□□ 0.47
DDB2-201ENST00000256996 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
DDB2-201ENST00000256996 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
DDB2-201ENST00000256996 ZNF518AQ6AHZ1 1483 aa17.93■□□□□ 0.46
DDB2-201ENST00000256996 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
DDB2-201ENST00000256996 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
DDB2-201ENST00000256996 MIER1Q8N108 512 aa17.91■□□□□ 0.46
DDB2-201ENST00000256996 ZFYVE16Q7Z3T8 1539 aa17.91■□□□□ 0.46
DDB2-201ENST00000256996 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
DDB2-201ENST00000256996 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
DDB2-201ENST00000256996 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
DDB2-201ENST00000256996 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
DDB2-201ENST00000256996 RAPGEF3O95398 923 aa17.88■□□□□ 0.45
DDB2-201ENST00000256996 TEX14Q8IWB6 1497 aa17.87■□□□□ 0.45
DDB2-201ENST00000256996 ATP7AQ04656 1500 aa17.87■□□□□ 0.45
DDB2-201ENST00000256996 INO80Q9ULG1 1556 aaPredicted RBP17.87■□□□□ 0.45
DDB2-201ENST00000256996 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
DDB2-201ENST00000256996 KDM5CP41229 1560 aa17.86■□□□□ 0.45
DDB2-201ENST00000256996 MLH3Q9UHC1 1453 aa17.85■□□□□ 0.45
DDB2-201ENST00000256996 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
DDB2-201ENST00000256996 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
DDB2-201ENST00000256996 NUP155O75694 1391 aa17.84■□□□□ 0.45
DDB2-201ENST00000256996 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
DDB2-201ENST00000256996 PZPP20742 1482 aa17.83■□□□□ 0.45
DDB2-201ENST00000256996 PPRC1Q5VV67 1664 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms