RNA–Protein interactions for RNA: ENST00000256682.8

ARF3-201, Transcript of ADP ribosylation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF3, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-201ENST00000256682 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
ARF3-201ENST00000256682 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
ARF3-201ENST00000256682 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
ARF3-201ENST00000256682 PBRM1Q86U86 1689 aa17.02■□□□□ 0.31
ARF3-201ENST00000256682 PTPRGP23470 1445 aa17.02■□□□□ 0.31
ARF3-201ENST00000256682 ADAMTS12P58397 1594 aa17.01■□□□□ 0.31
ARF3-201ENST00000256682 KIAA0586Q9BVV6 1533 aa17.01■□□□□ 0.31
ARF3-201ENST00000256682 RGS3P49796 1198 aa17.01■□□□□ 0.31
ARF3-201ENST00000256682 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
ARF3-201ENST00000256682 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
ARF3-201ENST00000256682 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
ARF3-201ENST00000256682 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
ARF3-201ENST00000256682 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
ARF3-201ENST00000256682 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
ARF3-201ENST00000256682 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
ARF3-201ENST00000256682 WDR97A6NE52 1622 aa16.96■□□□□ 0.31
ARF3-201ENST00000256682 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
ARF3-201ENST00000256682 PPP1R15AO75807 674 aaPredicted RBP16.95■□□□□ 0.3
ARF3-201ENST00000256682 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
ARF3-201ENST00000256682 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
ARF3-201ENST00000256682 IQGAP2Q13576 1575 aa16.94■□□□□ 0.3
ARF3-201ENST00000256682 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
ARF3-201ENST00000256682 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
ARF3-201ENST00000256682 PKD2Q13563 968 aa16.93■□□□□ 0.3
ARF3-201ENST00000256682 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
ARF3-201ENST00000256682 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
ARF3-201ENST00000256682 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
ARF3-201ENST00000256682 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
ARF3-201ENST00000256682 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
ARF3-201ENST00000256682 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
ARF3-201ENST00000256682 NUP160Q12769 1436 aa16.88■□□□□ 0.29
ARF3-201ENST00000256682 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
ARF3-201ENST00000256682 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
ARF3-201ENST00000256682 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
ARF3-201ENST00000256682 CHD1O14646 1710 aa16.83■□□□□ 0.28
ARF3-201ENST00000256682 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
ARF3-201ENST00000256682 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
ARF3-201ENST00000256682 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
ARF3-201ENST00000256682 C14orf37Q86TY3 774 aa16.79■□□□□ 0.28
ARF3-201ENST00000256682 SOX12O15370 315 aa16.78■□□□□ 0.28
ARF3-201ENST00000256682 NOP58Q9Y2X3 529 aaKnown RBP16.78■□□□□ 0.28
ARF3-201ENST00000256682 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
ARF3-201ENST00000256682 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
ARF3-201ENST00000256682 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
ARF3-201ENST00000256682 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.278e-6■■□□□ 11.4
ARF3-201ENST00000256682 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
ARF3-201ENST00000256682 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
ARF3-201ENST00000256682 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
ARF3-201ENST00000256682 NUP155O75694 1391 aa16.72■□□□□ 0.27
ARF3-201ENST00000256682 GGT6Q6P531 493 aa16.72■□□□□ 0.27
ARF3-201ENST00000256682 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
ARF3-201ENST00000256682 NUTM2DQ5VT03 806 aaPredicted RBP16.72■□□□□ 0.27
ARF3-201ENST00000256682 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
ARF3-201ENST00000256682 MLECQ14165 292 aa16.72■□□□□ 0.27
ARF3-201ENST00000256682 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
ARF3-201ENST00000256682 STK26Q9P289 416 aa16.71■□□□□ 0.27
ARF3-201ENST00000256682 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
ARF3-201ENST00000256682 ERCC6L2Q5T890 1561 aa16.69■□□□□ 0.26
ARF3-201ENST00000256682 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
ARF3-201ENST00000256682 DEKP35659 375 aaKnown RBP16.68■□□□□ 0.26
ARF3-201ENST00000256682 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
ARF3-201ENST00000256682 PLIN1O60240 522 aa16.68■□□□□ 0.26
ARF3-201ENST00000256682 TMF1P82094 1093 aa16.68■□□□□ 0.26
ARF3-201ENST00000256682 A0A0G2JS52 829 aa16.67■□□□□ 0.26
ARF3-201ENST00000256682 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
ARF3-201ENST00000256682 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
ARF3-201ENST00000256682 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
ARF3-201ENST00000256682 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
ARF3-201ENST00000256682 ANP32BQ92688 251 aaKnown RBP16.66■□□□□ 0.26
ARF3-201ENST00000256682 POGKQ9P215 609 aa16.66■□□□□ 0.26
ARF3-201ENST00000256682 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
ARF3-201ENST00000256682 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
ARF3-201ENST00000256682 PCF11O94913 1555 aaKnown RBP16.64■□□□□ 0.25
ARF3-201ENST00000256682 NCLP19338 710 aaKnown RBP16.64■□□□□ 0.25
ARF3-201ENST00000256682 CLUAP1Q96AJ1 413 aa16.64■□□□□ 0.25
ARF3-201ENST00000256682 FYCO1Q9BQS8 1478 aa16.63■□□□□ 0.25
ARF3-201ENST00000256682 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
ARF3-201ENST00000256682 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
ARF3-201ENST00000256682 EPRSP07814 1512 aaKnown RBP16.62■□□□□ 0.25
ARF3-201ENST00000256682 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
ARF3-201ENST00000256682 MYH16Q9H6N6 1097 aa16.61■□□□□ 0.25
ARF3-201ENST00000256682 APBB1O00213 710 aa16.6■□□□□ 0.25
ARF3-201ENST00000256682 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
ARF3-201ENST00000256682 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
ARF3-201ENST00000256682 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
ARF3-201ENST00000256682 ROCK2O75116 1388 aaKnown RBP16.6■□□□□ 0.25
ARF3-201ENST00000256682 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
ARF3-201ENST00000256682 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
ARF3-201ENST00000256682 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
ARF3-201ENST00000256682 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
ARF3-201ENST00000256682 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
ARF3-201ENST00000256682 BECN1Q14457 450 aa16.59■□□□□ 0.25
ARF3-201ENST00000256682 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
ARF3-201ENST00000256682 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.25
ARF3-201ENST00000256682 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
ARF3-201ENST00000256682 RRP7AQ9Y3A4 280 aaKnown RBP16.57■□□□□ 0.24
ARF3-201ENST00000256682 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
ARF3-201ENST00000256682 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
ARF3-201ENST00000256682 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
ARF3-201ENST00000256682 EFCAB2Q5VUJ9 269 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms