RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 CSB-PGBD3P0DP91 1061 aa14.41□□□□□ -0.1
SCO1-201ENST00000255390 PLEKHD1A6NEE1 506 aa14.4□□□□□ -0.1
SCO1-201ENST00000255390 WWC1Q8IX03 1113 aa14.4□□□□□ -0.1
SCO1-201ENST00000255390 SPRYD3Q8NCJ5 442 aa14.4□□□□□ -0.1
SCO1-201ENST00000255390 PAK3O75914 559 aaPredicted RBP14.4□□□□□ -0.1
SCO1-201ENST00000255390 CFAP44Q96MT7 982 aa14.4□□□□□ -0.1
SCO1-201ENST00000255390 MARCH6O60337 910 aa14.39□□□□□ -0.11
SCO1-201ENST00000255390 SETQ01105 290 aaPredicted RBP14.39□□□□□ -0.11
SCO1-201ENST00000255390 TCEAL9Q9UHQ7 104 aa14.38□□□□□ -0.11
SCO1-201ENST00000255390 CARD11Q9BXL7 1154 aa14.37□□□□□ -0.11
SCO1-201ENST00000255390 APBB1O00213 710 aa14.37□□□□□ -0.11
SCO1-201ENST00000255390 ARID3AQ99856 593 aa14.36□□□□□ -0.11
SCO1-201ENST00000255390 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
SCO1-201ENST00000255390 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
SCO1-201ENST00000255390 MLECQ14165 292 aa14.36□□□□□ -0.11
SCO1-201ENST00000255390 SRPK2P78362 688 aaKnown RBP14.36□□□□□ -0.11
SCO1-201ENST00000255390 FRAT2O75474 233 aaPredicted RBP14.35□□□□□ -0.11
SCO1-201ENST00000255390 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
SCO1-201ENST00000255390 NOP58Q9Y2X3 529 aaKnown RBP14.33□□□□□ -0.12
SCO1-201ENST00000255390 TPM3P06753 285 aa14.32□□□□□ -0.12
SCO1-201ENST00000255390 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
SCO1-201ENST00000255390 SYAP1Q96A49 352 aaPredicted RBP14.31□□□□□ -0.12
SCO1-201ENST00000255390 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
SCO1-201ENST00000255390 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
SCO1-201ENST00000255390 KANK1Q14678 1352 aa14.3□□□□□ -0.12
SCO1-201ENST00000255390 CTDP1Q9Y5B0 961 aaPredicted RBP14.3□□□□□ -0.12
SCO1-201ENST00000255390 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
SCO1-201ENST00000255390 PTMSP20962 102 aa14.3□□□□□ -0.12
SCO1-201ENST00000255390 CWC22Q9HCG8 908 aaKnown RBP14.29□□□□□ -0.12
SCO1-201ENST00000255390 PATL2C9JE40 543 aaKnown RBP14.29□□□□□ -0.12
SCO1-201ENST00000255390 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
SCO1-201ENST00000255390 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.12
SCO1-201ENST00000255390 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
SCO1-201ENST00000255390 TSR1Q2NL82 804 aaKnown RBP14.27□□□□□ -0.12
SCO1-201ENST00000255390 TOMM22Q9NS69 142 aa14.27□□□□□ -0.12
SCO1-201ENST00000255390 CFDP1Q9UEE9 299 aaPredicted RBP14.27□□□□□ -0.13
SCO1-201ENST00000255390 GBP4Q96PP9 640 aa14.26□□□□□ -0.13
SCO1-201ENST00000255390 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
SCO1-201ENST00000255390 MSH5O43196 834 aa14.24□□□□□ -0.13
SCO1-201ENST00000255390 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
SCO1-201ENST00000255390 IPO8O15397 1037 aaKnown RBP14.24□□□□□ -0.13
SCO1-201ENST00000255390 MORC1Q86VD1 984 aa14.24□□□□□ -0.13
SCO1-201ENST00000255390 TPM2P07951 284 aa14.23□□□□□ -0.13
SCO1-201ENST00000255390 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■■■■ 96.1
SCO1-201ENST00000255390 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
SCO1-201ENST00000255390 RAD21O60216 631 aa14.23□□□□□ -0.13
SCO1-201ENST00000255390 SPAG9O60271 1321 aaKnown RBP14.23□□□□□ -0.13
SCO1-201ENST00000255390 CALD1Q05682 793 aaKnown RBP14.22□□□□□ -0.13
SCO1-201ENST00000255390 RRP12Q5JTH9 1297 aaKnown RBP14.22□□□□□ -0.13
SCO1-201ENST00000255390 MIER1Q8N108 512 aa14.21□□□□□ -0.13
SCO1-201ENST00000255390 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
SCO1-201ENST00000255390 STK26Q9P289 416 aa14.21□□□□□ -0.14
SCO1-201ENST00000255390 HDGFL2Q7Z4V5 671 aaPredicted RBP14.21□□□□□ -0.14
SCO1-201ENST00000255390 CHMP4AQ9BY43 222 aa14.21□□□□□ -0.14
SCO1-201ENST00000255390 TMF1P82094 1093 aa14.2□□□□□ -0.14
SCO1-201ENST00000255390 CCDC70Q6NSX1 233 aa14.2□□□□□ -0.14
SCO1-201ENST00000255390 GZF1Q9H116 711 aaPredicted RBP14.19□□□□□ -0.14
SCO1-201ENST00000255390 B4GALNT3Q6L9W6 998 aa14.19□□□□□ -0.14
SCO1-201ENST00000255390 SF3A1Q15459 793 aaKnown RBP14.19□□□□□ -0.14
SCO1-201ENST00000255390 STK31Q9BXU1 1019 aa14.18□□□□□ -0.14
SCO1-201ENST00000255390 AKAP17AQ02040 695 aaKnown RBP14.18□□□□□ -0.14
SCO1-201ENST00000255390 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
SCO1-201ENST00000255390 NOL10Q9BSC4 688 aaKnown RBP14.18□□□□□ -0.14
SCO1-201ENST00000255390 ITPRIPQ8IWB1 547 aa14.17□□□□□ -0.14
SCO1-201ENST00000255390 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
SCO1-201ENST00000255390 PPP4R2Q9NY27 417 aa14.17□□□□□ -0.14
SCO1-201ENST00000255390 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
SCO1-201ENST00000255390 CCAR2Q8N163 923 aaKnown RBP14.16□□□□□ -0.14
SCO1-201ENST00000255390 PHF14O94880 888 aa14.16□□□□□ -0.14
SCO1-201ENST00000255390 TPM1P09493 284 aa14.16□□□□□ -0.14
SCO1-201ENST00000255390 KAT6BQ8WYB5 2073 aa14.16□□□□□ -0.14
SCO1-201ENST00000255390 KIF3AQ9Y496 699 aa14.16□□□□□ -0.14
SCO1-201ENST00000255390 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
SCO1-201ENST00000255390 CCDC43Q96MW1 224 aaKnown RBP14.15□□□□□ -0.14
SCO1-201ENST00000255390 KIF16BQ96L93 1317 aa14.15□□□□□ -0.15
SCO1-201ENST00000255390 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
SCO1-201ENST00000255390 MEX3CQ5U5Q3 659 aaKnown RBP14.14□□□□□ -0.15
SCO1-201ENST00000255390 H3BQV1 296 aa14.13□□□□□ -0.15
SCO1-201ENST00000255390 IFFO2Q5TF58 517 aa14.13□□□□□ -0.15
SCO1-201ENST00000255390 PCMTD1Q96MG8 357 aaPredicted RBP14.13□□□□□ -0.15
SCO1-201ENST00000255390 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
SCO1-201ENST00000255390 FBXW7Q969H0 707 aa14.12□□□□□ -0.15
SCO1-201ENST00000255390 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
SCO1-201ENST00000255390 NOL8Q76FK4 1167 aaKnown RBP14.12□□□□□ -0.15
SCO1-201ENST00000255390 GPS2Q13227 327 aa14.11□□□□□ -0.15
SCO1-201ENST00000255390 HMMRO75330 724 aa14.11□□□□□ -0.15
SCO1-201ENST00000255390 SLC4A10Q6U841 1118 aa14.1□□□□□ -0.15
SCO1-201ENST00000255390 DEKP35659 375 aaKnown RBP14.1□□□□□ -0.15
SCO1-201ENST00000255390 PAF1Q8N7H5 531 aa14.1□□□□□ -0.15
SCO1-201ENST00000255390 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
SCO1-201ENST00000255390 EVA1CP58658 441 aa14.09□□□□□ -0.15
SCO1-201ENST00000255390 R3HCC1Q9Y3T6 440 aaKnown RBP14.09□□□□□ -0.15
SCO1-201ENST00000255390 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
SCO1-201ENST00000255390 CT47A1Q5JQC4 288 aaPredicted RBP14.09□□□□□ -0.15
SCO1-201ENST00000255390 CLIP1P30622 1438 aa14.08□□□□□ -0.15
SCO1-201ENST00000255390 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
SCO1-201ENST00000255390 GOLGA6L19H0YKK7 550 aa14.07□□□□□ -0.16
SCO1-201ENST00000255390 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
SCO1-201ENST00000255390 VPS37DQ86XT2 251 aa14.07□□□□□ -0.16
SCO1-201ENST00000255390 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms