RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RAB3GAP2Q9H2M9 1393 aa27.78■■■□□ 2.04
TNFSF9-201ENST00000245817 PTPRKQ15262 1439 aa27.77■■■□□ 2.04
TNFSF9-201ENST00000245817 CAMSAP2Q08AD1 1489 aa27.77■■■□□ 2.04
TNFSF9-201ENST00000245817 CDC42BPAQ5VT25 1732 aa27.75■■■□□ 2.03
TNFSF9-201ENST00000245817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.75■■■□□ 2.035e-7■■■□□ 15.1
TNFSF9-201ENST00000245817 CHIC2Q9UKJ5 165 aa27.74■■■□□ 2.03
TNFSF9-201ENST00000245817 TRHP20396 242 aaPredicted RBP27.73■■■□□ 2.03
TNFSF9-201ENST00000245817 DAPK1P53355 1430 aa27.73■■■□□ 2.03
TNFSF9-201ENST00000245817 FAM69CQ0P6D2 419 aa27.72■■■□□ 2.03
TNFSF9-201ENST00000245817 HFM1A2PYH4 1435 aa27.71■■■□□ 2.03
TNFSF9-201ENST00000245817 ABCC5O15440 1437 aa27.69■■■□□ 2.02
TNFSF9-201ENST00000245817 TTC37Q6PGP7 1564 aa27.69■■■□□ 2.02
TNFSF9-201ENST00000245817 DNMT1P26358 1616 aaKnown RBP27.68■■■□□ 2.02
TNFSF9-201ENST00000245817 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
TNFSF9-201ENST00000245817 ARHGAP5Q13017 1502 aa27.66■■■□□ 2.02
TNFSF9-201ENST00000245817 RRP7BPQ9NSQ0 103 aa27.66■■■□□ 2.02
TNFSF9-201ENST00000245817 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
TNFSF9-201ENST00000245817 DIP2BQ9P265 1576 aa27.64■■■□□ 2.02
TNFSF9-201ENST00000245817 AKNAQ7Z591 1439 aa27.64■■■□□ 2.01
TNFSF9-201ENST00000245817 PLCH2O75038 1416 aa27.63■■■□□ 2.01
TNFSF9-201ENST00000245817 NAIPQ13075 1403 aa27.63■■■□□ 2.01
TNFSF9-201ENST00000245817 ROCK1Q13464 1354 aa27.63■■■□□ 2.01
TNFSF9-201ENST00000245817 MYO5CQ9NQX4 1742 aa27.62■■■□□ 2.01
TNFSF9-201ENST00000245817 RSPH4AQ5TD94 716 aa27.62■■■□□ 2.01
TNFSF9-201ENST00000245817 EFCAB2Q5VUJ9 269 aa27.62■■■□□ 2.01
TNFSF9-201ENST00000245817 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
TNFSF9-201ENST00000245817 CDC42BPBQ9Y5S2 1711 aa27.61■■■□□ 2.01
TNFSF9-201ENST00000245817 TSPY4P0CV99 314 aa27.61■■■□□ 2.01
TNFSF9-201ENST00000245817 TSPY10P0CW01 314 aa27.61■■■□□ 2.01
TNFSF9-201ENST00000245817 GLI2P10070 1586 aa27.61■■■□□ 2.01
TNFSF9-201ENST00000245817 KIF13AQ9H1H9 1805 aa27.6■■■□□ 2.01
TNFSF9-201ENST00000245817 HNRNPMP52272 730 aaKnown RBP eCLIP27.59■■■□□ 2.01
TNFSF9-201ENST00000245817 PLEKHH2Q8IVE3 1493 aa27.58■■■□□ 2.01
TNFSF9-201ENST00000245817 SAMD9LQ8IVG5 1584 aa27.56■■■□□ 2
TNFSF9-201ENST00000245817 ABCA9Q8IUA7 1624 aa27.54■■■□□ 2
TNFSF9-201ENST00000245817 ANKRD30AQ9BXX3 1397 aa27.53■■■□□ 2
TNFSF9-201ENST00000245817 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
TNFSF9-201ENST00000245817 CD109Q6YHK3 1445 aa27.53■■■□□ 2
TNFSF9-201ENST00000245817 ARHGEF5Q12774 1597 aa27.53■■■□□ 2
TNFSF9-201ENST00000245817 KIAA1107Q9UPP5 1409 aa27.52■■■□□ 2
TNFSF9-201ENST00000245817 ARAP3Q8WWN8 1544 aa27.51■■□□□ 1.99
TNFSF9-201ENST00000245817 GCC2Q8IWJ2 1684 aa27.51■■□□□ 1.99
TNFSF9-201ENST00000245817 MBD5Q9P267 1494 aa27.51■■□□□ 1.99
TNFSF9-201ENST00000245817 SHANK2Q9UPX8 1470 aa27.51■■□□□ 1.99
TNFSF9-201ENST00000245817 CCDC141Q6ZP82 1450 aa27.5■■□□□ 1.99
TNFSF9-201ENST00000245817 MAP3K4Q9Y6R4 1608 aa27.49■■□□□ 1.99
TNFSF9-201ENST00000245817 C9orf84Q5VXU9 1444 aa27.49■■□□□ 1.99
TNFSF9-201ENST00000245817 CROCC2H7BZ55 1655 aa27.49■■□□□ 1.99
TNFSF9-201ENST00000245817 ADGRL2O95490 1459 aa27.48■■□□□ 1.99
TNFSF9-201ENST00000245817 NCOA1Q15788 1441 aa27.48■■□□□ 1.99
TNFSF9-201ENST00000245817 TSPOAP1O95153 1857 aa27.47■■□□□ 1.99
TNFSF9-201ENST00000245817 SYCP2Q9BX26 1530 aa27.47■■□□□ 1.99
TNFSF9-201ENST00000245817 ADGBQ8N7X0 1667 aa27.46■■□□□ 1.99
TNFSF9-201ENST00000245817 TRIM52Q96A61 297 aa27.45■■□□□ 1.98
TNFSF9-201ENST00000245817 FANCAO15360 1455 aa27.42■■□□□ 1.98
TNFSF9-201ENST00000245817 ABCC1P33527 1531 aa27.38■■□□□ 1.97
TNFSF9-201ENST00000245817 TEX14Q8IWB6 1497 aa27.37■■□□□ 1.97
TNFSF9-201ENST00000245817 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
TNFSF9-201ENST00000245817 PPRC1Q5VV67 1664 aaKnown RBP27.35■■□□□ 1.97
TNFSF9-201ENST00000245817 KIF15Q9NS87 1388 aa27.34■■□□□ 1.97
TNFSF9-201ENST00000245817 KDM6BO15054 1643 aa27.34■■□□□ 1.97
TNFSF9-201ENST00000245817 ANKRD50Q9ULJ7 1429 aa27.34■■□□□ 1.97
TNFSF9-201ENST00000245817 MAST1Q9Y2H9 1570 aa27.32■■□□□ 1.96
TNFSF9-201ENST00000245817 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
TNFSF9-201ENST00000245817 TRAPPC8Q9Y2L5 1435 aa27.3■■□□□ 1.96
TNFSF9-201ENST00000245817 SCAPERQ9BY12 1400 aa27.29■■□□□ 1.96
TNFSF9-201ENST00000245817 SPAG9O60271 1321 aaKnown RBP27.28■■□□□ 1.96
TNFSF9-201ENST00000245817 NEO1Q92859 1461 aa27.28■■□□□ 1.96
TNFSF9-201ENST00000245817 MPHOSPH9Q99550 1183 aa27.27■■□□□ 1.96
TNFSF9-201ENST00000245817 CFAP74Q9C0B2 1584 aa27.27■■□□□ 1.96
TNFSF9-201ENST00000245817 AFAP1Q8N556 730 aa27.27■■□□□ 1.96
TNFSF9-201ENST00000245817 MYT1LQ9UL68 1186 aa27.24■■□□□ 1.95
TNFSF9-201ENST00000245817 RTEL1-TNFRSF6BF6WH68 1400 aa27.23■■□□□ 1.95
TNFSF9-201ENST00000245817 SLC4A1APQ9BWU0 796 aaKnown RBP27.22■■□□□ 1.95
TNFSF9-201ENST00000245817 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
TNFSF9-201ENST00000245817 PLXNC1O60486 1568 aa27.21■■□□□ 1.95
TNFSF9-201ENST00000245817 SIN3AQ96ST3 1273 aa27.19■■□□□ 1.94
TNFSF9-201ENST00000245817 DUOX2Q9NRD8 1548 aa27.17■■□□□ 1.94
TNFSF9-201ENST00000245817 ZNF518AQ6AHZ1 1483 aa27.15■■□□□ 1.94
TNFSF9-201ENST00000245817 NUP155O75694 1391 aa27.15■■□□□ 1.94
TNFSF9-201ENST00000245817 TIMELESSQ9UNS1 1208 aa27.15■■□□□ 1.94
TNFSF9-201ENST00000245817 ERBINQ96RT1 1412 aa27.12■■□□□ 1.93
TNFSF9-201ENST00000245817 ZFYVE16Q7Z3T8 1539 aa27.12■■□□□ 1.93
TNFSF9-201ENST00000245817 DENND4BO75064 1496 aaPredicted RBP27.12■■□□□ 1.93
TNFSF9-201ENST00000245817 RAPGEF3O95398 923 aa27.11■■□□□ 1.93
TNFSF9-201ENST00000245817 ATP7AQ04656 1500 aa27.1■■□□□ 1.93
TNFSF9-201ENST00000245817 COL17A1Q9UMD9 1497 aaPredicted RBP27.1■■□□□ 1.93
TNFSF9-201ENST00000245817 PZPP20742 1482 aa27.1■■□□□ 1.93
TNFSF9-201ENST00000245817 POGZQ7Z3K3 1410 aa27.09■■□□□ 1.93
TNFSF9-201ENST00000245817 FOXD1Q16676 465 aa27.07■■□□□ 1.92
TNFSF9-201ENST00000245817 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
TNFSF9-201ENST00000245817 PKD2Q13563 968 aa27.05■■□□□ 1.92
TNFSF9-201ENST00000245817 TONSLQ96HA7 1378 aa27.05■■□□□ 1.92
TNFSF9-201ENST00000245817 KDM5DQ9BY66 1539 aa27.05■■□□□ 1.92
TNFSF9-201ENST00000245817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.05■■□□□ 1.92
TNFSF9-201ENST00000245817 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.91
TNFSF9-201ENST00000245817 RICTORQ6R327 1708 aa27.01■■□□□ 1.91
TNFSF9-201ENST00000245817 KDM5CP41229 1560 aa27■■□□□ 1.91
TNFSF9-201ENST00000245817 DHX29Q7Z478 1369 aaKnown RBP27■■□□□ 1.91
TNFSF9-201ENST00000245817 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms