RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
TNFAIP3-201ENST00000237289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.229e-8■■□□□ 12.2
TNFAIP3-201ENST00000237289 MIA2Q96PC5 1412 aa16.39■□□□□ 0.21
TNFAIP3-201ENST00000237289 AFAP1Q8N556 730 aa16.39■□□□□ 0.21
TNFAIP3-201ENST00000237289 PLCH2O75038 1416 aa16.38■□□□□ 0.21
TNFAIP3-201ENST00000237289 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
TNFAIP3-201ENST00000237289 TEX14Q8IWB6 1497 aa16.38■□□□□ 0.21
TNFAIP3-201ENST00000237289 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
TNFAIP3-201ENST00000237289 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
TNFAIP3-201ENST00000237289 FANCAO15360 1455 aa16.37■□□□□ 0.21
TNFAIP3-201ENST00000237289 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
TNFAIP3-201ENST00000237289 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
TNFAIP3-201ENST00000237289 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
TNFAIP3-201ENST00000237289 ABCC10Q5T3U5 1492 aa16.34■□□□□ 0.21
TNFAIP3-201ENST00000237289 AKNAQ7Z591 1439 aa16.33■□□□□ 0.21
TNFAIP3-201ENST00000237289 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
TNFAIP3-201ENST00000237289 MLECQ14165 292 aa16.33■□□□□ 0.2
TNFAIP3-201ENST00000237289 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
TNFAIP3-201ENST00000237289 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
TNFAIP3-201ENST00000237289 MAGI3Q5TCQ9 1506 aa16.3■□□□□ 0.2
TNFAIP3-201ENST00000237289 GGT6Q6P531 493 aa16.29■□□□□ 0.2
TNFAIP3-201ENST00000237289 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
TNFAIP3-201ENST00000237289 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
TNFAIP3-201ENST00000237289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.28■□□□□ 0.2
TNFAIP3-201ENST00000237289 KIF3BO15066 747 aa16.28■□□□□ 0.2
TNFAIP3-201ENST00000237289 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.19
TNFAIP3-201ENST00000237289 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
TNFAIP3-201ENST00000237289 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
TNFAIP3-201ENST00000237289 KANK1Q14678 1352 aa16.23■□□□□ 0.19
TNFAIP3-201ENST00000237289 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
TNFAIP3-201ENST00000237289 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
TNFAIP3-201ENST00000237289 NEO1Q92859 1461 aa16.22■□□□□ 0.19
TNFAIP3-201ENST00000237289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.22■□□□□ 0.19
TNFAIP3-201ENST00000237289 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
TNFAIP3-201ENST00000237289 C9orf84Q5VXU9 1444 aa16.22■□□□□ 0.19
TNFAIP3-201ENST00000237289 KIAA1107Q9UPP5 1409 aa16.22■□□□□ 0.19
TNFAIP3-201ENST00000237289 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
TNFAIP3-201ENST00000237289 DAPK1P53355 1430 aa16.21■□□□□ 0.18
TNFAIP3-201ENST00000237289 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
TNFAIP3-201ENST00000237289 SETD5Q9C0A6 1442 aa16.2■□□□□ 0.18
TNFAIP3-201ENST00000237289 TSPOAP1O95153 1857 aa16.18■□□□□ 0.18
TNFAIP3-201ENST00000237289 ZNF518AQ6AHZ1 1483 aa16.18■□□□□ 0.18
TNFAIP3-201ENST00000237289 MYO5CQ9NQX4 1742 aa16.18■□□□□ 0.18
TNFAIP3-201ENST00000237289 STAG3Q9UJ98 1225 aa16.17■□□□□ 0.18
TNFAIP3-201ENST00000237289 SYCP2Q9BX26 1530 aa16.17■□□□□ 0.18
TNFAIP3-201ENST00000237289 ABCC5O15440 1437 aa16.17■□□□□ 0.18
TNFAIP3-201ENST00000237289 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
TNFAIP3-201ENST00000237289 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
TNFAIP3-201ENST00000237289 NUP155O75694 1391 aa16.15■□□□□ 0.18
TNFAIP3-201ENST00000237289 ABCA9Q8IUA7 1624 aa16.15■□□□□ 0.18
TNFAIP3-201ENST00000237289 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
TNFAIP3-201ENST00000237289 CHGAP10645 457 aaKnown RBP16.14■□□□□ 0.17
TNFAIP3-201ENST00000237289 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
TNFAIP3-201ENST00000237289 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
TNFAIP3-201ENST00000237289 CFAP74Q9C0B2 1584 aa16.14■□□□□ 0.17
TNFAIP3-201ENST00000237289 GLI2P10070 1586 aa16.13■□□□□ 0.17
TNFAIP3-201ENST00000237289 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
TNFAIP3-201ENST00000237289 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
TNFAIP3-201ENST00000237289 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
TNFAIP3-201ENST00000237289 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
TNFAIP3-201ENST00000237289 PREX2Q70Z35 1606 aa16.1■□□□□ 0.17
TNFAIP3-201ENST00000237289 POGZQ7Z3K3 1410 aa16.1■□□□□ 0.17
TNFAIP3-201ENST00000237289 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
TNFAIP3-201ENST00000237289 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
TNFAIP3-201ENST00000237289 NCOA1Q15788 1441 aa16.07■□□□□ 0.16
TNFAIP3-201ENST00000237289 PKD2Q13563 968 aa16.06■□□□□ 0.16
TNFAIP3-201ENST00000237289 RTEL1-TNFRSF6BF6WH68 1400 aa16.05■□□□□ 0.16
TNFAIP3-201ENST00000237289 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
TNFAIP3-201ENST00000237289 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
TNFAIP3-201ENST00000237289 CDC42BPAQ5VT25 1732 aa16.05■□□□□ 0.16
TNFAIP3-201ENST00000237289 SAMD9LQ8IVG5 1584 aa16.05■□□□□ 0.16
TNFAIP3-201ENST00000237289 BCANQ96GW7 911 aa16.05■□□□□ 0.16
TNFAIP3-201ENST00000237289 HRCP23327 699 aa16.04■□□□□ 0.16
TNFAIP3-201ENST00000237289 ABCC1P33527 1531 aa16.04■□□□□ 0.16
TNFAIP3-201ENST00000237289 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
TNFAIP3-201ENST00000237289 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
TNFAIP3-201ENST00000237289 KDM6BO15054 1643 aa16.02■□□□□ 0.16
TNFAIP3-201ENST00000237289 A2MP01023 1474 aa16.02■□□□□ 0.15
TNFAIP3-201ENST00000237289 ZNF326Q5BKZ1 582 aaKnown RBP16.01■□□□□ 0.15
TNFAIP3-201ENST00000237289 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
TNFAIP3-201ENST00000237289 PTPRKQ15262 1439 aa16.01■□□□□ 0.15
TNFAIP3-201ENST00000237289 CDC42BPBQ9Y5S2 1711 aa16■□□□□ 0.15
TNFAIP3-201ENST00000237289 ATP10AO60312 1499 aa16■□□□□ 0.15
TNFAIP3-201ENST00000237289 ATP7AQ04656 1500 aa15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 ARHGEF5Q12774 1597 aa15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 NAIPQ13075 1403 aa15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 FOXD1Q16676 465 aa15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
TNFAIP3-201ENST00000237289 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
TNFAIP3-201ENST00000237289 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
TNFAIP3-201ENST00000237289 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
TNFAIP3-201ENST00000237289 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
TNFAIP3-201ENST00000237289 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
TNFAIP3-201ENST00000237289 DUOX2Q9NRD8 1548 aa15.96■□□□□ 0.15
TNFAIP3-201ENST00000237289 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
TNFAIP3-201ENST00000237289 TONSLQ96HA7 1378 aa15.95■□□□□ 0.14
TNFAIP3-201ENST00000237289 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
TNFAIP3-201ENST00000237289 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms