RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
HDAC5-201ENST00000225983 SOX12O15370 315 aa20.8■□□□□ 0.92
HDAC5-201ENST00000225983 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
HDAC5-201ENST00000225983 MLECQ14165 292 aa20.8■□□□□ 0.92
HDAC5-201ENST00000225983 MS4A1P11836 297 aa20.79■□□□□ 0.92
HDAC5-201ENST00000225983 STK26Q9P289 416 aa20.78■□□□□ 0.92
HDAC5-201ENST00000225983 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.92
HDAC5-201ENST00000225983 HSP90AB1P08238 724 aaKnown RBP20.77■□□□□ 0.91
HDAC5-201ENST00000225983 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
HDAC5-201ENST00000225983 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
HDAC5-201ENST00000225983 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
HDAC5-201ENST00000225983 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
HDAC5-201ENST00000225983 ANKRD30AQ9BXX3 1397 aa20.75■□□□□ 0.91
HDAC5-201ENST00000225983 CHMP4BQ9H444 224 aaKnown RBP20.74■□□□□ 0.91
HDAC5-201ENST00000225983 DHX57Q6P158 1386 aaKnown RBP20.73■□□□□ 0.91
HDAC5-201ENST00000225983 SPRYD3Q8NCJ5 442 aa20.73■□□□□ 0.91
HDAC5-201ENST00000225983 RALBP1Q15311 655 aa20.73■□□□□ 0.91
HDAC5-201ENST00000225983 HNRNPMP52272 730 aaKnown RBP eCLIP20.72■□□□□ 0.915e-16■■■■■ 28.8
HDAC5-201ENST00000225983 OS9Q13438 667 aaPredicted RBP20.71■□□□□ 0.91
HDAC5-201ENST00000225983 TSHZ2Q9NRE2 1034 aa20.7■□□□□ 0.9
HDAC5-201ENST00000225983 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
HDAC5-201ENST00000225983 ERICH6BQ5W0A0 696 aa20.68■□□□□ 0.9
HDAC5-201ENST00000225983 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
HDAC5-201ENST00000225983 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
HDAC5-201ENST00000225983 HSCBQ8IWL3 235 aa20.67■□□□□ 0.9
HDAC5-201ENST00000225983 TAOK2Q9UL54 1235 aa20.67■□□□□ 0.9
HDAC5-201ENST00000225983 DEKP35659 375 aaKnown RBP20.66■□□□□ 0.9
HDAC5-201ENST00000225983 ZRSR1Q15695 479 aaKnown RBP20.65■□□□□ 0.9
HDAC5-201ENST00000225983 DNTTIP2Q5QJE6 756 aaKnown RBP20.65■□□□□ 0.9
HDAC5-201ENST00000225983 EFCAB2Q5VUJ9 269 aa20.65■□□□□ 0.9
HDAC5-201ENST00000225983 ATAD2BQ9ULI0 1458 aa20.65■□□□□ 0.9
HDAC5-201ENST00000225983 PLCB2Q00722 1185 aa20.64■□□□□ 0.9
HDAC5-201ENST00000225983 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
HDAC5-201ENST00000225983 NAP1L5Q96NT1 182 aaPredicted RBP20.62■□□□□ 0.89
HDAC5-201ENST00000225983 APBB1O00213 710 aa20.62■□□□□ 0.89
HDAC5-201ENST00000225983 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
HDAC5-201ENST00000225983 KIF3BO15066 747 aa20.61■□□□□ 0.89
HDAC5-201ENST00000225983 KCNJ4P48050 445 aa20.61■□□□□ 0.89
HDAC5-201ENST00000225983 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
HDAC5-201ENST00000225983 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
HDAC5-201ENST00000225983 ITPRIPQ8IWB1 547 aa20.58■□□□□ 0.89
HDAC5-201ENST00000225983 HDGFP51858 240 aaKnown RBP20.58■□□□□ 0.89
HDAC5-201ENST00000225983 FGD1P98174 961 aa20.57■□□□□ 0.88
HDAC5-201ENST00000225983 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
HDAC5-201ENST00000225983 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
HDAC5-201ENST00000225983 NLRP13Q86W25 1043 aa20.56■□□□□ 0.88
HDAC5-201ENST00000225983 RTF1Q92541 710 aaKnown RBP20.56■□□□□ 0.88
HDAC5-201ENST00000225983 IPO8O15397 1037 aaKnown RBP20.55■□□□□ 0.88
HDAC5-201ENST00000225983 NAP1L2Q9ULW6 460 aaPredicted RBP20.55■□□□□ 0.88
HDAC5-201ENST00000225983 ST20-MTHFSA0A0A6YYL1 179 aa20.54■□□□□ 0.88
HDAC5-201ENST00000225983 CDK11BP21127 795 aaKnown RBP20.54■□□□□ 0.88
HDAC5-201ENST00000225983 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
HDAC5-201ENST00000225983 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
HDAC5-201ENST00000225983 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
HDAC5-201ENST00000225983 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
HDAC5-201ENST00000225983 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
HDAC5-201ENST00000225983 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
HDAC5-201ENST00000225983 SPAG9O60271 1321 aaKnown RBP20.5■□□□□ 0.87
HDAC5-201ENST00000225983 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
HDAC5-201ENST00000225983 MCCP23508 829 aa20.48■□□□□ 0.87
HDAC5-201ENST00000225983 KIF15Q9NS87 1388 aa20.48■□□□□ 0.87
HDAC5-201ENST00000225983 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
HDAC5-201ENST00000225983 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
HDAC5-201ENST00000225983 PANK3Q9H999 370 aa20.47■□□□□ 0.87
HDAC5-201ENST00000225983 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
HDAC5-201ENST00000225983 TRHP20396 242 aaPredicted RBP20.46■□□□□ 0.87
HDAC5-201ENST00000225983 RSPH4AQ5TD94 716 aa20.45■□□□□ 0.86
HDAC5-201ENST00000225983 IPO9Q96P70 1041 aaKnown RBP20.45■□□□□ 0.86
HDAC5-201ENST00000225983 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
HDAC5-201ENST00000225983 L1TD1Q5T7N2 865 aaKnown RBP20.45■□□□□ 0.86
HDAC5-201ENST00000225983 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
HDAC5-201ENST00000225983 GZF1Q9H116 711 aaPredicted RBP20.45■□□□□ 0.86
HDAC5-201ENST00000225983 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
HDAC5-201ENST00000225983 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
HDAC5-201ENST00000225983 CALD1Q05682 793 aaKnown RBP20.44■□□□□ 0.86
HDAC5-201ENST00000225983 GOLGA6L4A6NEF3 574 aa20.44■□□□□ 0.86
HDAC5-201ENST00000225983 PMFBP1Q8TBY8 1022 aa20.44■□□□□ 0.86
HDAC5-201ENST00000225983 CENPJQ9HC77 1338 aaPredicted RBP20.43■□□□□ 0.86
HDAC5-201ENST00000225983 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
HDAC5-201ENST00000225983 CCDC144AA2RUR9 1427 aa20.43■□□□□ 0.86
HDAC5-201ENST00000225983 WASHC2CQ9Y4E1 1318 aa20.42■□□□□ 0.86
HDAC5-201ENST00000225983 NPHP1O15259 732 aa20.42■□□□□ 0.86
HDAC5-201ENST00000225983 PLIN1O60240 522 aa20.41■□□□□ 0.86
HDAC5-201ENST00000225983 TERF2IPQ9NYB0 399 aa20.41■□□□□ 0.86
HDAC5-201ENST00000225983 USP47Q96K76 1375 aa20.4■□□□□ 0.86
HDAC5-201ENST00000225983 TULP1O00294 542 aaPredicted RBP20.39■□□□□ 0.85
HDAC5-201ENST00000225983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.38■□□□□ 0.852e-6■■□□□ 11.5
HDAC5-201ENST00000225983 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
HDAC5-201ENST00000225983 IGF1RP08069 1367 aa20.38■□□□□ 0.85
HDAC5-201ENST00000225983 PHLDB1Q86UU1 1377 aa20.38■□□□□ 0.85
HDAC5-201ENST00000225983 EXOC6Q8TAG9 804 aa20.36■□□□□ 0.85
HDAC5-201ENST00000225983 MSNP26038 577 aaKnown RBP20.35■□□□□ 0.85
HDAC5-201ENST00000225983 GBP4Q96PP9 640 aa20.35■□□□□ 0.85
HDAC5-201ENST00000225983 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
HDAC5-201ENST00000225983 ZBED9Q6R2W3 1325 aa20.35■□□□□ 0.85
HDAC5-201ENST00000225983 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
HDAC5-201ENST00000225983 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
HDAC5-201ENST00000225983 NUTM2FA1L443 756 aa20.34■□□□□ 0.85
HDAC5-201ENST00000225983 GOLGA6L6A8MZA4 724 aa20.33■□□□□ 0.85
HDAC5-201ENST00000225983 STK31Q9BXU1 1019 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms