RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 PHLDB1Q86UU1 1377 aa34.19■■■■□ 3.06
SLC25A39-201ENST00000225308 ARHGAP5Q13017 1502 aa34.17■■■■□ 3.06
SLC25A39-201ENST00000225308 GPATCH8Q9UKJ3 1502 aaKnown RBP34.16■■■■□ 3.06
SLC25A39-201ENST00000225308 NCOA2Q15596 1464 aa34.16■■■■□ 3.06
SLC25A39-201ENST00000225308 AKNAQ7Z591 1439 aa34.14■■■■□ 3.06
SLC25A39-201ENST00000225308 CCNB3Q8WWL7 1395 aa34.11■■■■□ 3.05
SLC25A39-201ENST00000225308 EFCAB2Q5VUJ9 269 aa34.11■■■■□ 3.05
SLC25A39-201ENST00000225308 ITSN2Q9NZM3 1697 aa34.1■■■■□ 3.05
SLC25A39-201ENST00000225308 ADGRL1O94910 1474 aa34.07■■■■□ 3.04
SLC25A39-201ENST00000225308 FRMPD1Q5SYB0 1578 aa34.04■■■■□ 3.04
SLC25A39-201ENST00000225308 RICTORQ6R327 1708 aa34.03■■■■□ 3.04
SLC25A39-201ENST00000225308 SAMD9LQ8IVG5 1584 aa34.01■■■■□ 3.03
SLC25A39-201ENST00000225308 DENND4BO75064 1496 aaPredicted RBP34■■■■□ 3.03
SLC25A39-201ENST00000225308 SCAPERQ9BY12 1400 aa33.99■■■■□ 3.03
SLC25A39-201ENST00000225308 RAPGEF3O95398 923 aa33.99■■■■□ 3.03
SLC25A39-201ENST00000225308 CFDP1Q9UEE9 299 aaPredicted RBP33.99■■■■□ 3.03
SLC25A39-201ENST00000225308 ABCC1P33527 1531 aa33.99■■■■□ 3.03
SLC25A39-201ENST00000225308 POGZQ7Z3K3 1410 aa33.94■■■■□ 3.02
SLC25A39-201ENST00000225308 ARHGEF12Q9NZN5 1544 aa33.93■■■■□ 3.02
SLC25A39-201ENST00000225308 ZNF777Q9ULD5 760 aaPredicted RBP33.92■■■■□ 3.02
SLC25A39-201ENST00000225308 MYOM3Q5VTT5 1437 aa33.91■■■■□ 3.02
SLC25A39-201ENST00000225308 SYCP2Q9BX26 1530 aa33.9■■■■□ 3.02
SLC25A39-201ENST00000225308 ZMYM4Q5VZL5 1548 aa33.89■■■■□ 3.02
SLC25A39-201ENST00000225308 ZNF518AQ6AHZ1 1483 aa33.86■■■■□ 3.01
SLC25A39-201ENST00000225308 ZNF644Q9H582 1327 aaPredicted RBP33.86■■■■□ 3.01
SLC25A39-201ENST00000225308 PLEKHH2Q8IVE3 1493 aa33.86■■■■□ 3.01
SLC25A39-201ENST00000225308 KDM5CP41229 1560 aa33.85■■■■□ 3.01
SLC25A39-201ENST00000225308 KIAA1107Q9UPP5 1409 aa33.84■■■■□ 3.01
SLC25A39-201ENST00000225308 TRAPPC8Q9Y2L5 1435 aa33.84■■■■□ 3.01
SLC25A39-201ENST00000225308 CAMSAP2Q08AD1 1489 aa33.84■■■■□ 3.01
SLC25A39-201ENST00000225308 MIA2Q96PC5 1412 aa33.82■■■■□ 3
SLC25A39-201ENST00000225308 AFAP1Q8N556 730 aa33.8■■■■□ 3
SLC25A39-201ENST00000225308 HNRNPMP52272 730 aaKnown RBP eCLIP33.78■■■■□ 32e-7■■■□□ 14.8
SLC25A39-201ENST00000225308 PPARGC1BQ86YN6 1023 aaKnown RBP33.78■■■■□ 3
SLC25A39-201ENST00000225308 MBD5Q9P267 1494 aa33.78■■■■□ 3
SLC25A39-201ENST00000225308 ARHGEF40Q8TER5 1519 aa33.76■■■■□ 3
SLC25A39-201ENST00000225308 MAGI2Q86UL8 1455 aa33.76■■■□□ 2.99
SLC25A39-201ENST00000225308 FGD6Q6ZV73 1430 aa33.75■■■□□ 2.99
SLC25A39-201ENST00000225308 HECW2Q9P2P5 1572 aa33.75■■■□□ 2.99
SLC25A39-201ENST00000225308 ZFYVE16Q7Z3T8 1539 aa33.72■■■□□ 2.99
SLC25A39-201ENST00000225308 PTPN23Q9H3S7 1636 aa33.72■■■□□ 2.99
SLC25A39-201ENST00000225308 YEATS2Q9ULM3 1422 aa33.72■■■□□ 2.99
SLC25A39-201ENST00000225308 MLH3Q9UHC1 1453 aa33.69■■■□□ 2.98
SLC25A39-201ENST00000225308 ARHGEF5Q12774 1597 aa33.68■■■□□ 2.98
SLC25A39-201ENST00000225308 KIDINS220Q9ULH0 1771 aa33.68■■■□□ 2.98
SLC25A39-201ENST00000225308 TCOF1Q13428 1488 aaKnown RBP33.65■■■□□ 2.98
SLC25A39-201ENST00000225308 CCDC141Q6ZP82 1450 aa33.65■■■□□ 2.98
SLC25A39-201ENST00000225308 INO80Q9ULG1 1556 aaPredicted RBP33.64■■■□□ 2.98
SLC25A39-201ENST00000225308 ABCA6Q8N139 1617 aa33.63■■■□□ 2.97
SLC25A39-201ENST00000225308 DIP2CQ9Y2E4 1556 aa33.62■■■□□ 2.97
SLC25A39-201ENST00000225308 ATP7AQ04656 1500 aa33.61■■■□□ 2.97
SLC25A39-201ENST00000225308 SPAG9O60271 1321 aaKnown RBP33.61■■■□□ 2.97
SLC25A39-201ENST00000225308 SIGLEC1Q9BZZ2 1709 aa33.58■■■□□ 2.97
SLC25A39-201ENST00000225308 RSPH4AQ5TD94 716 aa33.58■■■□□ 2.97
SLC25A39-201ENST00000225308 ATP10AO60312 1499 aa33.56■■■□□ 2.96
SLC25A39-201ENST00000225308 MYT1LQ9UL68 1186 aa33.56■■■□□ 2.96
SLC25A39-201ENST00000225308 DNMT1P26358 1616 aaKnown RBP33.53■■■□□ 2.96
SLC25A39-201ENST00000225308 CROCC2H7BZ55 1655 aa33.53■■■□□ 2.96
SLC25A39-201ENST00000225308 C9orf84Q5VXU9 1444 aa33.52■■■□□ 2.96
SLC25A39-201ENST00000225308 RTEL1-TNFRSF6BF6WH68 1400 aa33.51■■■□□ 2.96
SLC25A39-201ENST00000225308 REREQ9P2R6 1566 aa33.5■■■□□ 2.95
SLC25A39-201ENST00000225308 MAST1Q9Y2H9 1570 aa33.49■■■□□ 2.95
SLC25A39-201ENST00000225308 ABCC5O15440 1437 aa33.49■■■□□ 2.95
SLC25A39-201ENST00000225308 DAPK1P53355 1430 aa33.47■■■□□ 2.95
SLC25A39-201ENST00000225308 FAM50AQ14320 339 aaKnown RBP33.46■■■□□ 2.95
SLC25A39-201ENST00000225308 ADGBQ8N7X0 1667 aa33.45■■■□□ 2.95
SLC25A39-201ENST00000225308 SHANK2Q9UPX8 1470 aa33.45■■■□□ 2.95
SLC25A39-201ENST00000225308 TSPY4P0CV99 314 aa33.45■■■□□ 2.95
SLC25A39-201ENST00000225308 TSPY10P0CW01 314 aa33.45■■■□□ 2.95
SLC25A39-201ENST00000225308 RRBP1Q9P2E9 1410 aaKnown RBP33.42■■■□□ 2.94
SLC25A39-201ENST00000225308 BCORL1Q5H9F3 1711 aa33.41■■■□□ 2.94
SLC25A39-201ENST00000225308 PLXNC1O60486 1568 aa33.41■■■□□ 2.94
SLC25A39-201ENST00000225308 ARID4BQ4LE39 1312 aaPredicted RBP33.39■■■□□ 2.94
SLC25A39-201ENST00000225308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.38■■■□□ 2.939e-7■■■□□ 14.9
SLC25A39-201ENST00000225308 A2MP01023 1474 aa33.38■■■□□ 2.93
SLC25A39-201ENST00000225308 AGLP35573 1532 aa33.37■■■□□ 2.93
SLC25A39-201ENST00000225308 KDM4FA0A1W2PPD8 638 aa33.36■■■□□ 2.93
SLC25A39-201ENST00000225308 ADAMTSL3P82987 1691 aa33.34■■■□□ 2.93
SLC25A39-201ENST00000225308 PTPRKQ15262 1439 aa33.3■■■□□ 2.92
SLC25A39-201ENST00000225308 DHX29Q7Z478 1369 aaKnown RBP33.29■■■□□ 2.92
SLC25A39-201ENST00000225308 MADDQ8WXG6 1647 aa33.26■■■□□ 2.92
SLC25A39-201ENST00000225308 ADGRL2O95490 1459 aa33.26■■■□□ 2.91
SLC25A39-201ENST00000225308 CHIC2Q9UKJ5 165 aa33.26■■■□□ 2.91
SLC25A39-201ENST00000225308 NCOA1Q15788 1441 aa33.24■■■□□ 2.91
SLC25A39-201ENST00000225308 MLECQ14165 292 aa33.24■■■□□ 2.91
SLC25A39-201ENST00000225308 KIF15Q9NS87 1388 aa33.23■■■□□ 2.91
SLC25A39-201ENST00000225308 ANKRD30AQ9BXX3 1397 aa33.22■■■□□ 2.91
SLC25A39-201ENST00000225308 DUOX2Q9NRD8 1548 aa33.22■■■□□ 2.91
SLC25A39-201ENST00000225308 FER1L4A9Z1Z3 1794 aa33.22■■■□□ 2.91
SLC25A39-201ENST00000225308 RRP7BPQ9NSQ0 103 aa33.19■■■□□ 2.9
SLC25A39-201ENST00000225308 ITGAEP38570 1179 aa33.17■■■□□ 2.9
SLC25A39-201ENST00000225308 EIF2AK4Q9P2K8 1649 aaKnown RBP33.17■■■□□ 2.9
SLC25A39-201ENST00000225308 RIMS1Q86UR5 1692 aaKnown RBP33.17■■■□□ 2.9
SLC25A39-201ENST00000225308 ROCK1Q13464 1354 aa33.13■■■□□ 2.89
SLC25A39-201ENST00000225308 ERBINQ96RT1 1412 aa33.13■■■□□ 2.89
SLC25A39-201ENST00000225308 KIF3BO15066 747 aa33.12■■■□□ 2.89
SLC25A39-201ENST00000225308 RNF17Q9BXT8 1623 aaKnown RBP33.11■■■□□ 2.89
SLC25A39-201ENST00000225308 PTPRMP28827 1452 aa33.09■■■□□ 2.89
SLC25A39-201ENST00000225308 GGT6Q6P531 493 aa33.08■■■□□ 2.89
SLC25A39-201ENST00000225308 MROH1Q8NDA8 1641 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms