RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 KDM6BO15054 1643 aa17.01■□□□□ 0.31
PITRM1-201ENST00000224949 DENND4BO75064 1496 aaPredicted RBP17■□□□□ 0.31
PITRM1-201ENST00000224949 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
PITRM1-201ENST00000224949 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
PITRM1-201ENST00000224949 NESP48681 1621 aa16.99■□□□□ 0.31
PITRM1-201ENST00000224949 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
PITRM1-201ENST00000224949 ZNF644Q9H582 1327 aaPredicted RBP16.99■□□□□ 0.31
PITRM1-201ENST00000224949 ZNF777Q9ULD5 760 aaPredicted RBP16.98■□□□□ 0.31
PITRM1-201ENST00000224949 CTTNBP2Q8WZ74 1663 aa16.98■□□□□ 0.31
PITRM1-201ENST00000224949 EHBP1L1Q8N3D4 1523 aa16.97■□□□□ 0.31
PITRM1-201ENST00000224949 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
PITRM1-201ENST00000224949 GRIN2BQ13224 1484 aa16.96■□□□□ 0.3
PITRM1-201ENST00000224949 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
PITRM1-201ENST00000224949 MAGI3Q5TCQ9 1506 aa16.94■□□□□ 0.3
PITRM1-201ENST00000224949 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
PITRM1-201ENST00000224949 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
PITRM1-201ENST00000224949 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
PITRM1-201ENST00000224949 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
PITRM1-201ENST00000224949 ANKRD30BQ9BXX2 1392 aa16.92■□□□□ 0.3
PITRM1-201ENST00000224949 CUL7Q14999 1698 aa16.92■□□□□ 0.3
PITRM1-201ENST00000224949 USP47Q96K76 1375 aa16.92■□□□□ 0.3
PITRM1-201ENST00000224949 NEFMP07197 916 aa16.91■□□□□ 0.3
PITRM1-201ENST00000224949 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
PITRM1-201ENST00000224949 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
PITRM1-201ENST00000224949 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
PITRM1-201ENST00000224949 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
PITRM1-201ENST00000224949 HECW1Q76N89 1606 aa16.9■□□□□ 0.3
PITRM1-201ENST00000224949 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
PITRM1-201ENST00000224949 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
PITRM1-201ENST00000224949 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
PITRM1-201ENST00000224949 PNISRQ8TF01 805 aaKnown RBP16.88■□□□□ 0.29
PITRM1-201ENST00000224949 PKD2Q13563 968 aa16.87■□□□□ 0.29
PITRM1-201ENST00000224949 SKAP1Q86WV1 359 aa16.87■□□□□ 0.29
PITRM1-201ENST00000224949 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
PITRM1-201ENST00000224949 RRP1P56182 461 aaKnown RBP16.85■□□□□ 0.29
PITRM1-201ENST00000224949 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
PITRM1-201ENST00000224949 PLIN1O60240 522 aa16.84■□□□□ 0.29
PITRM1-201ENST00000224949 PDE4AP27815 886 aa16.84■□□□□ 0.29
PITRM1-201ENST00000224949 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
PITRM1-201ENST00000224949 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
PITRM1-201ENST00000224949 GCC2Q8IWJ2 1684 aa16.84■□□□□ 0.29
PITRM1-201ENST00000224949 SAMD9Q5K651 1589 aa16.83■□□□□ 0.29
PITRM1-201ENST00000224949 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.29
PITRM1-201ENST00000224949 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
PITRM1-201ENST00000224949 DAPK1P53355 1430 aa16.82■□□□□ 0.28
PITRM1-201ENST00000224949 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
PITRM1-201ENST00000224949 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
PITRM1-201ENST00000224949 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
PITRM1-201ENST00000224949 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.8■□□□□ 0.28
PITRM1-201ENST00000224949 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
PITRM1-201ENST00000224949 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
PITRM1-201ENST00000224949 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
PITRM1-201ENST00000224949 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
PITRM1-201ENST00000224949 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
PITRM1-201ENST00000224949 ABCC5O15440 1437 aa16.79■□□□□ 0.28
PITRM1-201ENST00000224949 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
PITRM1-201ENST00000224949 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
PITRM1-201ENST00000224949 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
PITRM1-201ENST00000224949 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
PITRM1-201ENST00000224949 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
PITRM1-201ENST00000224949 CC2D1BQ5T0F9 858 aaKnown RBP16.76■□□□□ 0.27
PITRM1-201ENST00000224949 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
PITRM1-201ENST00000224949 KIF15Q9NS87 1388 aa16.75■□□□□ 0.27
PITRM1-201ENST00000224949 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
PITRM1-201ENST00000224949 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
PITRM1-201ENST00000224949 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
PITRM1-201ENST00000224949 ROCK1Q13464 1354 aa16.72■□□□□ 0.27
PITRM1-201ENST00000224949 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
PITRM1-201ENST00000224949 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
PITRM1-201ENST00000224949 RALBP1Q15311 655 aa16.7■□□□□ 0.26
PITRM1-201ENST00000224949 NUP155O75694 1391 aa16.7■□□□□ 0.26
PITRM1-201ENST00000224949 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
PITRM1-201ENST00000224949 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
PITRM1-201ENST00000224949 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
PITRM1-201ENST00000224949 PZPP20742 1482 aa16.68■□□□□ 0.26
PITRM1-201ENST00000224949 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
PITRM1-201ENST00000224949 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
PITRM1-201ENST00000224949 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
PITRM1-201ENST00000224949 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
PITRM1-201ENST00000224949 BRPF3Q9ULD4 1205 aa16.67■□□□□ 0.26
PITRM1-201ENST00000224949 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
PITRM1-201ENST00000224949 FBLN2P98095 1184 aa16.66■□□□□ 0.26
PITRM1-201ENST00000224949 KTN1Q86UP2 1357 aaKnown RBP16.66■□□□□ 0.26
PITRM1-201ENST00000224949 PRG4Q92954 1404 aaPredicted RBP16.66■□□□□ 0.26
PITRM1-201ENST00000224949 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
PITRM1-201ENST00000224949 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
PITRM1-201ENST00000224949 RGS3P49796 1198 aa16.64■□□□□ 0.25
PITRM1-201ENST00000224949 MS4A1P11836 297 aa16.64■□□□□ 0.25
PITRM1-201ENST00000224949 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
PITRM1-201ENST00000224949 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
PITRM1-201ENST00000224949 EIF5BO60841 1220 aaKnown RBP16.63■□□□□ 0.25
PITRM1-201ENST00000224949 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
PITRM1-201ENST00000224949 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
PITRM1-201ENST00000224949 WDR62O43379 1518 aa16.63■□□□□ 0.25
PITRM1-201ENST00000224949 ANKRD30AQ9BXX3 1397 aa16.62■□□□□ 0.25
PITRM1-201ENST00000224949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.256e-6■■■□□ 19.2
PITRM1-201ENST00000224949 DNMT1P26358 1616 aaKnown RBP16.62■□□□□ 0.25
PITRM1-201ENST00000224949 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
PITRM1-201ENST00000224949 TSPY4P0CV99 314 aa16.61■□□□□ 0.25
PITRM1-201ENST00000224949 TSPY10P0CW01 314 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms