RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 SHROOM2Q13796 1616 aa18.78■□□□□ 0.6
PLOD3-201ENST00000223127 UACAQ9BZF9 1416 aa18.77■□□□□ 0.59
PLOD3-201ENST00000223127 GPATCH8Q9UKJ3 1502 aaKnown RBP18.76■□□□□ 0.59
PLOD3-201ENST00000223127 TRIM52Q96A61 297 aa18.75■□□□□ 0.59
PLOD3-201ENST00000223127 DAPK1P53355 1430 aa18.74■□□□□ 0.59
PLOD3-201ENST00000223127 ABCC5O15440 1437 aa18.73■□□□□ 0.59
PLOD3-201ENST00000223127 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
PLOD3-201ENST00000223127 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
PLOD3-201ENST00000223127 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
PLOD3-201ENST00000223127 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
PLOD3-201ENST00000223127 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
PLOD3-201ENST00000223127 KDM6BO15054 1643 aa18.67■□□□□ 0.58
PLOD3-201ENST00000223127 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
PLOD3-201ENST00000223127 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
PLOD3-201ENST00000223127 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
PLOD3-201ENST00000223127 ABCC2Q92887 1545 aa18.65■□□□□ 0.58
PLOD3-201ENST00000223127 AKNAQ7Z591 1439 aa18.64■□□□□ 0.57
PLOD3-201ENST00000223127 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
PLOD3-201ENST00000223127 HNRNPMP52272 730 aaKnown RBP eCLIP18.63■□□□□ 0.57
PLOD3-201ENST00000223127 ROCK1Q13464 1354 aa18.62■□□□□ 0.57
PLOD3-201ENST00000223127 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
PLOD3-201ENST00000223127 FOXD1Q16676 465 aa18.62■□□□□ 0.57
PLOD3-201ENST00000223127 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
PLOD3-201ENST00000223127 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
PLOD3-201ENST00000223127 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
PLOD3-201ENST00000223127 TONSLQ96HA7 1378 aa18.58■□□□□ 0.56
PLOD3-201ENST00000223127 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
PLOD3-201ENST00000223127 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
PLOD3-201ENST00000223127 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
PLOD3-201ENST00000223127 DENND4BO75064 1496 aaPredicted RBP18.55■□□□□ 0.56
PLOD3-201ENST00000223127 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
PLOD3-201ENST00000223127 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
PLOD3-201ENST00000223127 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
PLOD3-201ENST00000223127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.53■□□□□ 0.564e-6■■■□□ 15.9
PLOD3-201ENST00000223127 PPP1R15AO75807 674 aaPredicted RBP18.53■□□□□ 0.56
PLOD3-201ENST00000223127 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
PLOD3-201ENST00000223127 ZCCHC11Q5TAX3 1644 aaKnown RBP18.52■□□□□ 0.56
PLOD3-201ENST00000223127 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
PLOD3-201ENST00000223127 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.55
PLOD3-201ENST00000223127 UHRF1BP1LA0JNW5 1464 aa18.51■□□□□ 0.55
PLOD3-201ENST00000223127 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
PLOD3-201ENST00000223127 CDC42BPBQ9Y5S2 1711 aa18.5■□□□□ 0.55
PLOD3-201ENST00000223127 SAMD9LQ8IVG5 1584 aa18.49■□□□□ 0.55
PLOD3-201ENST00000223127 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
PLOD3-201ENST00000223127 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
PLOD3-201ENST00000223127 ADGRL2O95490 1459 aa18.48■□□□□ 0.55
PLOD3-201ENST00000223127 MBD5Q9P267 1494 aa18.48■□□□□ 0.55
PLOD3-201ENST00000223127 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
PLOD3-201ENST00000223127 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
PLOD3-201ENST00000223127 ADGBQ8N7X0 1667 aa18.47■□□□□ 0.55
PLOD3-201ENST00000223127 SYCP2Q9BX26 1530 aa18.45■□□□□ 0.54
PLOD3-201ENST00000223127 KIF15Q9NS87 1388 aa18.45■□□□□ 0.54
PLOD3-201ENST00000223127 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
PLOD3-201ENST00000223127 SHANK2Q9UPX8 1470 aa18.43■□□□□ 0.54
PLOD3-201ENST00000223127 BCANQ96GW7 911 aa18.43■□□□□ 0.54
PLOD3-201ENST00000223127 EFCAB2Q5VUJ9 269 aa18.42■□□□□ 0.54
PLOD3-201ENST00000223127 RSPH4AQ5TD94 716 aa18.41■□□□□ 0.54
PLOD3-201ENST00000223127 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
PLOD3-201ENST00000223127 PKD2Q13563 968 aa18.41■□□□□ 0.54
PLOD3-201ENST00000223127 NUP155O75694 1391 aa18.41■□□□□ 0.54
PLOD3-201ENST00000223127 PZPP20742 1482 aa18.41■□□□□ 0.54
PLOD3-201ENST00000223127 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
PLOD3-201ENST00000223127 PLCH2O75038 1416 aa18.4■□□□□ 0.54
PLOD3-201ENST00000223127 ANKRD30BQ9BXX2 1392 aa18.4■□□□□ 0.54
PLOD3-201ENST00000223127 BCL11AQ9H165 835 aa18.39■□□□□ 0.54
PLOD3-201ENST00000223127 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
PLOD3-201ENST00000223127 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
PLOD3-201ENST00000223127 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
PLOD3-201ENST00000223127 FKBP8Q14318 412 aa18.37■□□□□ 0.53
PLOD3-201ENST00000223127 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
PLOD3-201ENST00000223127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
PLOD3-201ENST00000223127 ASXL2Q76L83 1435 aa18.35■□□□□ 0.53
PLOD3-201ENST00000223127 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
PLOD3-201ENST00000223127 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.53
PLOD3-201ENST00000223127 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
PLOD3-201ENST00000223127 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
PLOD3-201ENST00000223127 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
PLOD3-201ENST00000223127 RPRD2Q5VT52 1461 aaKnown RBP18.32■□□□□ 0.52
PLOD3-201ENST00000223127 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
PLOD3-201ENST00000223127 ABCC1P33527 1531 aa18.27■□□□□ 0.52
PLOD3-201ENST00000223127 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.51
PLOD3-201ENST00000223127 FANCAO15360 1455 aa18.27■□□□□ 0.51
PLOD3-201ENST00000223127 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
PLOD3-201ENST00000223127 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
PLOD3-201ENST00000223127 NBPF8Q3BBV2 869 aa18.26■□□□□ 0.51
PLOD3-201ENST00000223127 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
PLOD3-201ENST00000223127 MAST1Q9Y2H9 1570 aa18.24■□□□□ 0.51
PLOD3-201ENST00000223127 TEX14Q8IWB6 1497 aa18.23■□□□□ 0.51
PLOD3-201ENST00000223127 NEFLP07196 543 aa18.22■□□□□ 0.51
PLOD3-201ENST00000223127 HSPA5P11021 654 aaKnown RBP18.22■□□□□ 0.51
PLOD3-201ENST00000223127 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.51
PLOD3-201ENST00000223127 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
PLOD3-201ENST00000223127 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
PLOD3-201ENST00000223127 KDM5DQ9BY66 1539 aa18.2■□□□□ 0.5
PLOD3-201ENST00000223127 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
PLOD3-201ENST00000223127 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
PLOD3-201ENST00000223127 ARAP3Q8WWN8 1544 aa18.19■□□□□ 0.5
PLOD3-201ENST00000223127 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
PLOD3-201ENST00000223127 DUOX2Q9NRD8 1548 aa18.19■□□□□ 0.5
PLOD3-201ENST00000223127 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms