RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 ANKRD30AQ9BXX3 1397 aa17.42■□□□□ 0.38
LAMB1-201ENST00000222399 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
LAMB1-201ENST00000222399 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
LAMB1-201ENST00000222399 TPRNQ4KMQ1 711 aa17.4■□□□□ 0.38
LAMB1-201ENST00000222399 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
LAMB1-201ENST00000222399 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
LAMB1-201ENST00000222399 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
LAMB1-201ENST00000222399 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
LAMB1-201ENST00000222399 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.38
LAMB1-201ENST00000222399 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
LAMB1-201ENST00000222399 MPHOSPH9Q99550 1183 aa17.38■□□□□ 0.37
LAMB1-201ENST00000222399 DNTTIP2Q5QJE6 756 aaKnown RBP17.38■□□□□ 0.37
LAMB1-201ENST00000222399 NUP155O75694 1391 aa17.38■□□□□ 0.37
LAMB1-201ENST00000222399 GOLGA2Q08379 1002 aa17.38■□□□□ 0.37
LAMB1-201ENST00000222399 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
LAMB1-201ENST00000222399 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
LAMB1-201ENST00000222399 SOX12O15370 315 aa17.37■□□□□ 0.37
LAMB1-201ENST00000222399 RALBP1Q15311 655 aa17.37■□□□□ 0.37
LAMB1-201ENST00000222399 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
LAMB1-201ENST00000222399 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
LAMB1-201ENST00000222399 MCCP23508 829 aa17.36■□□□□ 0.37
LAMB1-201ENST00000222399 STK26Q9P289 416 aa17.36■□□□□ 0.37
LAMB1-201ENST00000222399 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
LAMB1-201ENST00000222399 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
LAMB1-201ENST00000222399 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
LAMB1-201ENST00000222399 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
LAMB1-201ENST00000222399 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
LAMB1-201ENST00000222399 FOXD1Q16676 465 aa17.35■□□□□ 0.37
LAMB1-201ENST00000222399 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
LAMB1-201ENST00000222399 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
LAMB1-201ENST00000222399 PLCB2Q00722 1185 aa17.3■□□□□ 0.36
LAMB1-201ENST00000222399 GOLGA6L4A6NEF3 574 aa17.29■□□□□ 0.36
LAMB1-201ENST00000222399 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
LAMB1-201ENST00000222399 TAOK2Q9UL54 1235 aa17.29■□□□□ 0.36
LAMB1-201ENST00000222399 NRDCO43847 1150 aa17.28■□□□□ 0.36
LAMB1-201ENST00000222399 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
LAMB1-201ENST00000222399 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.368e-7■□□□□ 9.4
LAMB1-201ENST00000222399 CCDC18Q5T9S5 1454 aa17.28■□□□□ 0.36
LAMB1-201ENST00000222399 RCAN3Q9UKA8 241 aa17.26■□□□□ 0.35
LAMB1-201ENST00000222399 TULP1O00294 542 aaPredicted RBP17.26■□□□□ 0.35
LAMB1-201ENST00000222399 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
LAMB1-201ENST00000222399 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
LAMB1-201ENST00000222399 WIZO95785 1651 aa17.25■□□□□ 0.35
LAMB1-201ENST00000222399 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
LAMB1-201ENST00000222399 KIF3BO15066 747 aa17.24■□□□□ 0.35
LAMB1-201ENST00000222399 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
LAMB1-201ENST00000222399 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
LAMB1-201ENST00000222399 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
LAMB1-201ENST00000222399 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.351e-6■■□□□ 13.5
LAMB1-201ENST00000222399 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
LAMB1-201ENST00000222399 NAP1L5Q96NT1 182 aaPredicted RBP17.21■□□□□ 0.35
LAMB1-201ENST00000222399 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
LAMB1-201ENST00000222399 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
LAMB1-201ENST00000222399 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
LAMB1-201ENST00000222399 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
LAMB1-201ENST00000222399 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
LAMB1-201ENST00000222399 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
LAMB1-201ENST00000222399 PTMSP20962 102 aa17.18■□□□□ 0.34
LAMB1-201ENST00000222399 APBB1O00213 710 aa17.17■□□□□ 0.34
LAMB1-201ENST00000222399 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
LAMB1-201ENST00000222399 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
LAMB1-201ENST00000222399 EID1Q9Y6B2 187 aa17.17■□□□□ 0.34
LAMB1-201ENST00000222399 WASHC2CQ9Y4E1 1318 aa17.16■□□□□ 0.34
LAMB1-201ENST00000222399 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
LAMB1-201ENST00000222399 NLRP13Q86W25 1043 aa17.15■□□□□ 0.34
LAMB1-201ENST00000222399 HDAC5Q9UQL6 1122 aa17.15■□□□□ 0.34
LAMB1-201ENST00000222399 PHLDB1Q86UU1 1377 aa17.15■□□□□ 0.34
LAMB1-201ENST00000222399 CHAF1AQ13111 956 aaPredicted RBP17.14■□□□□ 0.33
LAMB1-201ENST00000222399 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
LAMB1-201ENST00000222399 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
LAMB1-201ENST00000222399 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
LAMB1-201ENST00000222399 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
LAMB1-201ENST00000222399 GBP4Q96PP9 640 aa17.13■□□□□ 0.33
LAMB1-201ENST00000222399 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
LAMB1-201ENST00000222399 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
LAMB1-201ENST00000222399 MSNP26038 577 aaKnown RBP17.12■□□□□ 0.33
LAMB1-201ENST00000222399 HMMRO75330 724 aa17.11■□□□□ 0.33
LAMB1-201ENST00000222399 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
LAMB1-201ENST00000222399 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
LAMB1-201ENST00000222399 GPATCH3Q96I76 525 aa17.1■□□□□ 0.33
LAMB1-201ENST00000222399 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
LAMB1-201ENST00000222399 DRC7Q8IY82 874 aa17.1■□□□□ 0.33
LAMB1-201ENST00000222399 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
LAMB1-201ENST00000222399 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
LAMB1-201ENST00000222399 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
LAMB1-201ENST00000222399 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.33
LAMB1-201ENST00000222399 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.33
LAMB1-201ENST00000222399 ISY1Q9ULR0 285 aaKnown RBP17.08■□□□□ 0.32
LAMB1-201ENST00000222399 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
LAMB1-201ENST00000222399 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
LAMB1-201ENST00000222399 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
LAMB1-201ENST00000222399 NUTM2DQ5VT03 806 aaPredicted RBP17.06■□□□□ 0.32
LAMB1-201ENST00000222399 AMPHP49418 695 aa17.05■□□□□ 0.32
LAMB1-201ENST00000222399 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
LAMB1-201ENST00000222399 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
LAMB1-201ENST00000222399 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
LAMB1-201ENST00000222399 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
LAMB1-201ENST00000222399 SYAP1Q96A49 352 aaPredicted RBP17.03■□□□□ 0.32
LAMB1-201ENST00000222399 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
LAMB1-201ENST00000222399 TMX4Q9H1E5 349 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms