RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
TGFBR3-201ENST00000212355 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
TGFBR3-201ENST00000212355 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
TGFBR3-201ENST00000212355 FOXD4L5Q5VV16 416 aaPredicted RBP17.4■□□□□ 0.38
TGFBR3-201ENST00000212355 FOXD4L4Q8WXT5 416 aaPredicted RBP17.4■□□□□ 0.38
TGFBR3-201ENST00000212355 ITPRIPQ8IWB1 547 aa17.39■□□□□ 0.37
TGFBR3-201ENST00000212355 GOLGA6L4A6NEF3 574 aa17.39■□□□□ 0.37
TGFBR3-201ENST00000212355 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
TGFBR3-201ENST00000212355 GGT6Q6P531 493 aa17.39■□□□□ 0.37
TGFBR3-201ENST00000212355 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
TGFBR3-201ENST00000212355 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
TGFBR3-201ENST00000212355 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
TGFBR3-201ENST00000212355 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
TGFBR3-201ENST00000212355 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
TGFBR3-201ENST00000212355 ANO8Q9HCE9 1232 aaPredicted RBP17.37■□□□□ 0.37
TGFBR3-201ENST00000212355 MSNP26038 577 aaKnown RBP17.37■□□□□ 0.37
TGFBR3-201ENST00000212355 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
TGFBR3-201ENST00000212355 PKD2Q13563 968 aa17.36■□□□□ 0.37
TGFBR3-201ENST00000212355 TSHZ2Q9NRE2 1034 aa17.36■□□□□ 0.37
TGFBR3-201ENST00000212355 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
TGFBR3-201ENST00000212355 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.37
TGFBR3-201ENST00000212355 PDE4CQ08493 712 aa17.32■□□□□ 0.36
TGFBR3-201ENST00000212355 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
TGFBR3-201ENST00000212355 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
TGFBR3-201ENST00000212355 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
TGFBR3-201ENST00000212355 EEA1Q15075 1411 aa17.31■□□□□ 0.36
TGFBR3-201ENST00000212355 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-201ENST00000212355 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
TGFBR3-201ENST00000212355 PLIN1O60240 522 aa17.29■□□□□ 0.36
TGFBR3-201ENST00000212355 ERCC6Q03468 1493 aa17.29■□□□□ 0.36
TGFBR3-201ENST00000212355 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
TGFBR3-201ENST00000212355 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
TGFBR3-201ENST00000212355 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
TGFBR3-201ENST00000212355 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
TGFBR3-201ENST00000212355 GOLGA6L6A8MZA4 724 aa17.28■□□□□ 0.36
TGFBR3-201ENST00000212355 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
TGFBR3-201ENST00000212355 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
TGFBR3-201ENST00000212355 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
TGFBR3-201ENST00000212355 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
TGFBR3-201ENST00000212355 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
TGFBR3-201ENST00000212355 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
TGFBR3-201ENST00000212355 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
TGFBR3-201ENST00000212355 CUX2O14529 1486 aa17.25■□□□□ 0.35
TGFBR3-201ENST00000212355 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
TGFBR3-201ENST00000212355 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
TGFBR3-201ENST00000212355 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
TGFBR3-201ENST00000212355 TRIM6-TRIM34B2RNG4 842 aa17.24■□□□□ 0.35
TGFBR3-201ENST00000212355 MCCP23508 829 aa17.24■□□□□ 0.35
TGFBR3-201ENST00000212355 CHAF1AQ13111 956 aaPredicted RBP17.23■□□□□ 0.35
TGFBR3-201ENST00000212355 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
TGFBR3-201ENST00000212355 CREBRFQ8IUR6 639 aa17.22■□□□□ 0.35
TGFBR3-201ENST00000212355 LTV1Q96GA3 475 aaPredicted RBP17.22■□□□□ 0.35
TGFBR3-201ENST00000212355 L1TD1Q5T7N2 865 aaKnown RBP17.22■□□□□ 0.35
TGFBR3-201ENST00000212355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.352e-8■■□□□ 11.6
TGFBR3-201ENST00000212355 CCER2I3L3R5 266 aa17.21■□□□□ 0.35
TGFBR3-201ENST00000212355 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
TGFBR3-201ENST00000212355 MS4A1P11836 297 aa17.2■□□□□ 0.34
TGFBR3-201ENST00000212355 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
TGFBR3-201ENST00000212355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
TGFBR3-201ENST00000212355 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
TGFBR3-201ENST00000212355 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
TGFBR3-201ENST00000212355 HNRNPMP52272 730 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■□□ 17.2
TGFBR3-201ENST00000212355 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
TGFBR3-201ENST00000212355 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
TGFBR3-201ENST00000212355 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
TGFBR3-201ENST00000212355 KANK1Q14678 1352 aa17.17■□□□□ 0.34
TGFBR3-201ENST00000212355 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
TGFBR3-201ENST00000212355 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
TGFBR3-201ENST00000212355 NUP155O75694 1391 aa17.14■□□□□ 0.33
TGFBR3-201ENST00000212355 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
TGFBR3-201ENST00000212355 L3MBTL2Q969R5 705 aa17.14■□□□□ 0.33
TGFBR3-201ENST00000212355 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
TGFBR3-201ENST00000212355 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
TGFBR3-201ENST00000212355 RWDD1Q9H446 243 aaPredicted RBP17.13■□□□□ 0.33
TGFBR3-201ENST00000212355 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
TGFBR3-201ENST00000212355 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
TGFBR3-201ENST00000212355 NRDCO43847 1150 aa17.11■□□□□ 0.33
TGFBR3-201ENST00000212355 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
TGFBR3-201ENST00000212355 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
TGFBR3-201ENST00000212355 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
TGFBR3-201ENST00000212355 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
TGFBR3-201ENST00000212355 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
TGFBR3-201ENST00000212355 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
TGFBR3-201ENST00000212355 GORABQ5T7V8 394 aa17.08■□□□□ 0.32
TGFBR3-201ENST00000212355 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
TGFBR3-201ENST00000212355 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
TGFBR3-201ENST00000212355 KIF3BO15066 747 aa17.05■□□□□ 0.32
TGFBR3-201ENST00000212355 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
TGFBR3-201ENST00000212355 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
TGFBR3-201ENST00000212355 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
TGFBR3-201ENST00000212355 TDRD9Q8NDG6 1382 aaKnown RBP17.05■□□□□ 0.32
TGFBR3-201ENST00000212355 NOC3LQ8WTT2 800 aaKnown RBP17.04■□□□□ 0.32
TGFBR3-201ENST00000212355 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
TGFBR3-201ENST00000212355 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
TGFBR3-201ENST00000212355 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
TGFBR3-201ENST00000212355 RALBP1Q15311 655 aa17.03■□□□□ 0.32
TGFBR3-201ENST00000212355 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
TGFBR3-201ENST00000212355 PANK3Q9H999 370 aa17.03■□□□□ 0.32
TGFBR3-201ENST00000212355 FHOD3Q2V2M9 1422 aa17.02■□□□□ 0.31
TGFBR3-201ENST00000212355 ANKRD45Q5TZF3 282 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms