RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 ITGAEP38570 1179 aa14.46□□□□□ -0.09
CHERP-201ENST00000198939 FAM69CQ0P6D2 419 aa14.46□□□□□ -0.09
CHERP-201ENST00000198939 SUPT6HQ7KZ85 1726 aaKnown RBP14.45□□□□□ -0.1
CHERP-201ENST00000198939 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
CHERP-201ENST00000198939 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
CHERP-201ENST00000198939 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
CHERP-201ENST00000198939 LRRIQ1Q96JM4 1722 aa14.43□□□□□ -0.1
CHERP-201ENST00000198939 NCOA2Q15596 1464 aa14.42□□□□□ -0.1
CHERP-201ENST00000198939 GLI2P10070 1586 aa14.42□□□□□ -0.1
CHERP-201ENST00000198939 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
CHERP-201ENST00000198939 CFDP1Q9UEE9 299 aaPredicted RBP14.41□□□□□ -0.1
CHERP-201ENST00000198939 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
CHERP-201ENST00000198939 MAGI3Q5TCQ9 1506 aa14.4□□□□□ -0.1
CHERP-201ENST00000198939 PHLDB1Q86UU1 1377 aa14.39□□□□□ -0.11
CHERP-201ENST00000198939 MIA2Q96PC5 1412 aa14.38□□□□□ -0.11
CHERP-201ENST00000198939 PLCH2O75038 1416 aa14.38□□□□□ -0.11
CHERP-201ENST00000198939 MYOM3Q5VTT5 1437 aa14.37□□□□□ -0.11
CHERP-201ENST00000198939 TEX14Q8IWB6 1497 aa14.37□□□□□ -0.11
CHERP-201ENST00000198939 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
CHERP-201ENST00000198939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.113e-6■■■□□ 18.9
CHERP-201ENST00000198939 ARAP3Q8WWN8 1544 aa14.36□□□□□ -0.11
CHERP-201ENST00000198939 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
CHERP-201ENST00000198939 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
CHERP-201ENST00000198939 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
CHERP-201ENST00000198939 PLEKHH2Q8IVE3 1493 aa14.35□□□□□ -0.11
CHERP-201ENST00000198939 ITSN2Q9NZM3 1697 aa14.34□□□□□ -0.11
CHERP-201ENST00000198939 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
CHERP-201ENST00000198939 GPATCH8Q9UKJ3 1502 aaKnown RBP14.34□□□□□ -0.11
CHERP-201ENST00000198939 TRIM52Q96A61 297 aa14.33□□□□□ -0.11
CHERP-201ENST00000198939 ZNF777Q9ULD5 760 aaPredicted RBP14.33□□□□□ -0.11
CHERP-201ENST00000198939 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
CHERP-201ENST00000198939 DDX10Q13206 875 aaKnown RBP14.33□□□□□ -0.12
CHERP-201ENST00000198939 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
CHERP-201ENST00000198939 MSH5O43196 834 aa14.31□□□□□ -0.12
CHERP-201ENST00000198939 MYO5CQ9NQX4 1742 aa14.31□□□□□ -0.12
CHERP-201ENST00000198939 NEO1Q92859 1461 aa14.31□□□□□ -0.12
CHERP-201ENST00000198939 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
CHERP-201ENST00000198939 FGD6Q6ZV73 1430 aa14.31□□□□□ -0.12
CHERP-201ENST00000198939 FAM50AQ14320 339 aaKnown RBP14.3□□□□□ -0.12
CHERP-201ENST00000198939 TTC37Q6PGP7 1564 aa14.3□□□□□ -0.12
CHERP-201ENST00000198939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHERP-201ENST00000198939 FANCAO15360 1455 aa14.3□□□□□ -0.12
CHERP-201ENST00000198939 MAP3K4Q9Y6R4 1608 aa14.29□□□□□ -0.12
CHERP-201ENST00000198939 EIF5BO60841 1220 aaKnown RBP14.29□□□□□ -0.12
CHERP-201ENST00000198939 PREX2Q70Z35 1606 aa14.28□□□□□ -0.12
CHERP-201ENST00000198939 KIAA1107Q9UPP5 1409 aa14.27□□□□□ -0.12
CHERP-201ENST00000198939 AKNAQ7Z591 1439 aa14.27□□□□□ -0.13
CHERP-201ENST00000198939 TSPY4P0CV99 314 aa14.27□□□□□ -0.13
CHERP-201ENST00000198939 TSPY10P0CW01 314 aa14.27□□□□□ -0.13
CHERP-201ENST00000198939 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.13
CHERP-201ENST00000198939 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
CHERP-201ENST00000198939 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
CHERP-201ENST00000198939 ANP32CO43423 234 aa14.25□□□□□ -0.13
CHERP-201ENST00000198939 CDC42BPAQ5VT25 1732 aa14.25□□□□□ -0.13
CHERP-201ENST00000198939 TCOF1Q13428 1488 aaKnown RBP14.24□□□□□ -0.13
CHERP-201ENST00000198939 ADGRL1O94910 1474 aa14.23□□□□□ -0.13
CHERP-201ENST00000198939 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
CHERP-201ENST00000198939 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
CHERP-201ENST00000198939 CAMSAP2Q08AD1 1489 aa14.23□□□□□ -0.13
CHERP-201ENST00000198939 SCAPERQ9BY12 1400 aa14.22□□□□□ -0.13
CHERP-201ENST00000198939 NBR1Q14596 966 aa14.22□□□□□ -0.13
CHERP-201ENST00000198939 DENND4BO75064 1496 aaPredicted RBP14.22□□□□□ -0.13
CHERP-201ENST00000198939 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.13
CHERP-201ENST00000198939 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHERP-201ENST00000198939 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
CHERP-201ENST00000198939 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
CHERP-201ENST00000198939 ZNF518AQ6AHZ1 1483 aa14.18□□□□□ -0.14
CHERP-201ENST00000198939 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
CHERP-201ENST00000198939 TSPOAP1O95153 1857 aa14.18□□□□□ -0.14
CHERP-201ENST00000198939 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
CHERP-201ENST00000198939 ABCC1P33527 1531 aa14.17□□□□□ -0.14
CHERP-201ENST00000198939 ARHGEF5Q12774 1597 aa14.17□□□□□ -0.14
CHERP-201ENST00000198939 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
CHERP-201ENST00000198939 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
CHERP-201ENST00000198939 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
CHERP-201ENST00000198939 DAPK1P53355 1430 aa14.15□□□□□ -0.14
CHERP-201ENST00000198939 ANKRD30AQ9BXX3 1397 aa14.14□□□□□ -0.15
CHERP-201ENST00000198939 RTEL1-TNFRSF6BF6WH68 1400 aa14.14□□□□□ -0.15
CHERP-201ENST00000198939 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
CHERP-201ENST00000198939 SHANK2Q9UPX8 1470 aa14.14□□□□□ -0.15
CHERP-201ENST00000198939 CCER2I3L3R5 266 aa14.13□□□□□ -0.15
CHERP-201ENST00000198939 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
CHERP-201ENST00000198939 PPRC1Q5VV67 1664 aaKnown RBP14.13□□□□□ -0.15
CHERP-201ENST00000198939 AFAP1Q8N556 730 aa14.13□□□□□ -0.15
CHERP-201ENST00000198939 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
CHERP-201ENST00000198939 ABCC5O15440 1437 aa14.13□□□□□ -0.15
CHERP-201ENST00000198939 RTN4Q9NQC3 1192 aaKnown RBP14.12□□□□□ -0.15
CHERP-201ENST00000198939 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
CHERP-201ENST00000198939 HNRNPUQ00839 825 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHERP-201ENST00000198939 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
CHERP-201ENST00000198939 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
CHERP-201ENST00000198939 TRAPPC8Q9Y2L5 1435 aa14.11□□□□□ -0.15
CHERP-201ENST00000198939 ROCK1Q13464 1354 aa14.11□□□□□ -0.15
CHERP-201ENST00000198939 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
CHERP-201ENST00000198939 MLH3Q9UHC1 1453 aa14.1□□□□□ -0.15
CHERP-201ENST00000198939 KDM6BO15054 1643 aa14.09□□□□□ -0.15
CHERP-201ENST00000198939 CHIC2Q9UKJ5 165 aa14.09□□□□□ -0.15
CHERP-201ENST00000198939 ARHGEF12Q9NZN5 1544 aa14.09□□□□□ -0.15
CHERP-201ENST00000198939 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
CHERP-201ENST00000198939 NOP58Q9Y2X3 529 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms