RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
TSPAN9-201ENST00000011898 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
TSPAN9-201ENST00000011898 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
TSPAN9-201ENST00000011898 NUP153P49790 1475 aaKnown RBP16.45■□□□□ 0.22
TSPAN9-201ENST00000011898 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
TSPAN9-201ENST00000011898 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
TSPAN9-201ENST00000011898 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
TSPAN9-201ENST00000011898 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
TSPAN9-201ENST00000011898 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
TSPAN9-201ENST00000011898 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
TSPAN9-201ENST00000011898 ABCA8O94911 1581 aa16.43■□□□□ 0.22
TSPAN9-201ENST00000011898 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
TSPAN9-201ENST00000011898 ABCC2Q92887 1545 aa16.42■□□□□ 0.22
TSPAN9-201ENST00000011898 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
TSPAN9-201ENST00000011898 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
TSPAN9-201ENST00000011898 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
TSPAN9-201ENST00000011898 TROQ12816 1431 aaPredicted RBP16.4■□□□□ 0.22
TSPAN9-201ENST00000011898 ARXQ96QS3 562 aa16.39■□□□□ 0.21
TSPAN9-201ENST00000011898 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
TSPAN9-201ENST00000011898 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
TSPAN9-201ENST00000011898 ARHGEF11O15085 1522 aa16.38■□□□□ 0.21
TSPAN9-201ENST00000011898 UHRF1BP1LA0JNW5 1464 aa16.38■□□□□ 0.21
TSPAN9-201ENST00000011898 ATP10BO94823 1461 aa16.38■□□□□ 0.21
TSPAN9-201ENST00000011898 NCOA2Q15596 1464 aa16.37■□□□□ 0.21
TSPAN9-201ENST00000011898 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
TSPAN9-201ENST00000011898 RBM19Q9Y4C8 960 aaKnown RBP16.37■□□□□ 0.21
TSPAN9-201ENST00000011898 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
TSPAN9-201ENST00000011898 MRS2Q9HD23 443 aa16.35■□□□□ 0.21
TSPAN9-201ENST00000011898 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
TSPAN9-201ENST00000011898 NEFMP07197 916 aa16.33■□□□□ 0.2
TSPAN9-201ENST00000011898 MYOM3Q5VTT5 1437 aa16.32■□□□□ 0.2
TSPAN9-201ENST00000011898 KIF14Q15058 1648 aa16.31■□□□□ 0.2
TSPAN9-201ENST00000011898 PHLDB1Q86UU1 1377 aa16.31■□□□□ 0.2
TSPAN9-201ENST00000011898 ESF1Q9H501 851 aaKnown RBP16.3■□□□□ 0.2
TSPAN9-201ENST00000011898 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
TSPAN9-201ENST00000011898 KDM5BQ9UGL1 1544 aa16.28■□□□□ 0.2
TSPAN9-201ENST00000011898 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
TSPAN9-201ENST00000011898 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.19
TSPAN9-201ENST00000011898 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.19
TSPAN9-201ENST00000011898 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.19
TSPAN9-201ENST00000011898 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.19
TSPAN9-201ENST00000011898 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.19
TSPAN9-201ENST00000011898 MIA2Q96PC5 1412 aa16.25■□□□□ 0.19
TSPAN9-201ENST00000011898 ZCCHC11Q5TAX3 1644 aaKnown RBP16.24■□□□□ 0.19
TSPAN9-201ENST00000011898 LRRIQ1Q96JM4 1722 aa16.24■□□□□ 0.19
TSPAN9-201ENST00000011898 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
TSPAN9-201ENST00000011898 WDR7Q9Y4E6 1490 aa16.23■□□□□ 0.19
TSPAN9-201ENST00000011898 EFCAB2Q5VUJ9 269 aa16.23■□□□□ 0.19
TSPAN9-201ENST00000011898 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
TSPAN9-201ENST00000011898 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
TSPAN9-201ENST00000011898 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
TSPAN9-201ENST00000011898 ASXL2Q76L83 1435 aa16.22■□□□□ 0.19
TSPAN9-201ENST00000011898 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
TSPAN9-201ENST00000011898 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
TSPAN9-201ENST00000011898 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
TSPAN9-201ENST00000011898 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
TSPAN9-201ENST00000011898 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
TSPAN9-201ENST00000011898 NAP1L5Q96NT1 182 aaPredicted RBP16.19■□□□□ 0.18
TSPAN9-201ENST00000011898 ANO8Q9HCE9 1232 aaPredicted RBP16.19■□□□□ 0.18
TSPAN9-201ENST00000011898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
TSPAN9-201ENST00000011898 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
TSPAN9-201ENST00000011898 ARHGAP5Q13017 1502 aa16.18■□□□□ 0.18
TSPAN9-201ENST00000011898 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-201ENST00000011898 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
TSPAN9-201ENST00000011898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
TSPAN9-201ENST00000011898 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
TSPAN9-201ENST00000011898 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
TSPAN9-201ENST00000011898 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
TSPAN9-201ENST00000011898 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
TSPAN9-201ENST00000011898 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
TSPAN9-201ENST00000011898 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
TSPAN9-201ENST00000011898 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
TSPAN9-201ENST00000011898 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
TSPAN9-201ENST00000011898 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
TSPAN9-201ENST00000011898 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
TSPAN9-201ENST00000011898 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
TSPAN9-201ENST00000011898 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
TSPAN9-201ENST00000011898 PLCH2O75038 1416 aa16.1■□□□□ 0.17
TSPAN9-201ENST00000011898 HNRNPMP52272 730 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■■■□ 21.5
TSPAN9-201ENST00000011898 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
TSPAN9-201ENST00000011898 TCOF1Q13428 1488 aaKnown RBP16.09■□□□□ 0.17
TSPAN9-201ENST00000011898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
TSPAN9-201ENST00000011898 CCER2I3L3R5 266 aa16.08■□□□□ 0.17
TSPAN9-201ENST00000011898 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
TSPAN9-201ENST00000011898 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
TSPAN9-201ENST00000011898 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
TSPAN9-201ENST00000011898 MYO5CQ9NQX4 1742 aa16.07■□□□□ 0.16
TSPAN9-201ENST00000011898 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
TSPAN9-201ENST00000011898 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
TSPAN9-201ENST00000011898 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
TSPAN9-201ENST00000011898 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
TSPAN9-201ENST00000011898 DAPK1P53355 1430 aa16.05■□□□□ 0.16
TSPAN9-201ENST00000011898 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
TSPAN9-201ENST00000011898 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
TSPAN9-201ENST00000011898 RGL3Q3MIN7 710 aa16.04■□□□□ 0.16
TSPAN9-201ENST00000011898 PREX2Q70Z35 1606 aa16.04■□□□□ 0.16
TSPAN9-201ENST00000011898 FANCAO15360 1455 aa16.04■□□□□ 0.16
TSPAN9-201ENST00000011898 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
TSPAN9-201ENST00000011898 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
TSPAN9-201ENST00000011898 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms