RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Mrc2Q64449 1479 aa29.5■■■□□ 2.31
Trim9-208ENSMUST00000221370 Lamc1P02468 1607 aaKnown RBP29.49■■■□□ 2.31
Trim9-208ENSMUST00000221370 Pkd2O35245 966 aa29.47■■■□□ 2.31
Trim9-208ENSMUST00000221370 Pik3c2gO70167 1506 aa29.45■■■□□ 2.3
Trim9-208ENSMUST00000221370 Gm13695A2AK44 830 aa29.45■■■□□ 2.3
Trim9-208ENSMUST00000221370 Plb1Q3TTY0 1478 aa29.43■■■□□ 2.3
Trim9-208ENSMUST00000221370 Washc2Q6PGL7 1334 aa29.43■■■□□ 2.3
Trim9-208ENSMUST00000221370 PxdnQ3UQ28 1475 aa29.43■■■□□ 2.3
Trim9-208ENSMUST00000221370 Ncoa3O09000 1398 aa29.42■■■□□ 2.3
Trim9-208ENSMUST00000221370 Rapgef6Q5NCJ1 1609 aa29.41■■■□□ 2.3
Trim9-208ENSMUST00000221370 Il16O54824 1322 aa29.4■■■□□ 2.3
Trim9-208ENSMUST00000221370 Arhgef40Q3UPH7 1517 aa29.39■■■□□ 2.3
Trim9-208ENSMUST00000221370 Kif21bQ9QXL1 1668 aa29.38■■■□□ 2.29
Trim9-208ENSMUST00000221370 WrnO09053 1401 aa29.38■■■□□ 2.29
Trim9-208ENSMUST00000221370 Kdm3bQ6ZPY7 1562 aa29.36■■■□□ 2.29
Trim9-208ENSMUST00000221370 Abca16E9PWJ7 1678 aa29.35■■■□□ 2.29
Trim9-208ENSMUST00000221370 Mtus2Q3UHD3 1353 aa29.35■■■□□ 2.29
Trim9-208ENSMUST00000221370 Zfp644E9QA22 1323 aa29.34■■■□□ 2.29
Trim9-208ENSMUST00000221370 Slc24a1Q91WD8 1130 aa29.33■■■□□ 2.29
Trim9-208ENSMUST00000221370 Mrs2Q5NCE8 434 aa29.32■■■□□ 2.28
Trim9-208ENSMUST00000221370 SphkapQ6NSW3 1687 aa29.32■■■□□ 2.28
Trim9-208ENSMUST00000221370 Nolc1E9Q5C9 702 aaKnown RBP29.31■■■□□ 2.28
Trim9-208ENSMUST00000221370 Arhgef12Q8R4H2 1543 aaKnown RBP29.3■■■□□ 2.28
Trim9-208ENSMUST00000221370 Pbrm1Q8BSQ9 1634 aaKnown RBP29.3■■■□□ 2.28
Trim9-208ENSMUST00000221370 Rtl5Q5DTT4 599 aa29.3■■■□□ 2.28
Trim9-208ENSMUST00000221370 Kdm6bQ5NCY0 1641 aa29.3■■■□□ 2.28
Trim9-208ENSMUST00000221370 Arhgef11Q68FM7 1552 aa29.29■■■□□ 2.28
Trim9-208ENSMUST00000221370 Slc4a2P13808 1237 aaKnown RBP29.28■■■□□ 2.28
Trim9-208ENSMUST00000221370 Kiaa1551Q5DTW7 1521 aa29.28■■■□□ 2.28
Trim9-208ENSMUST00000221370 Adcy10Q8C0T9 1614 aa29.27■■■□□ 2.28
Trim9-208ENSMUST00000221370 Cdc42bpaQ3UU96 1719 aa29.27■■■□□ 2.28
Trim9-208ENSMUST00000221370 Nup160Q9Z0W3 1402 aaKnown RBP29.27■■■□□ 2.28
Trim9-208ENSMUST00000221370 Setd1bQ8CFT2 1985 aa29.27■■■□□ 2.28
Trim9-208ENSMUST00000221370 AlkP97793 1621 aa29.27■■■□□ 2.28
Trim9-208ENSMUST00000221370 Cwc22Q8C5N3 908 aaKnown RBP29.25■■■□□ 2.27
Trim9-208ENSMUST00000221370 Mbd5B1AYB6 1498 aa29.24■■■□□ 2.27
Trim9-208ENSMUST00000221370 Plekhg5Q66T02 1073 aa29.24■■■□□ 2.27
Trim9-208ENSMUST00000221370 PnisrA2AJT4 805 aaKnown RBP29.22■■■□□ 2.27
Trim9-208ENSMUST00000221370 NrdcQ8BHG1 1161 aa29.21■■■□□ 2.27
Trim9-208ENSMUST00000221370 Exoc6Q8R313 802 aa29.2■■■□□ 2.26
Trim9-208ENSMUST00000221370 DroshaQ5HZJ0 1373 aaKnown RBP29.19■■■□□ 2.26
Trim9-208ENSMUST00000221370 Dhx57Q6P5D3 1388 aaKnown RBP29.19■■■□□ 2.26
Trim9-208ENSMUST00000221370 Adgrb2Q8CGM1 1561 aa29.18■■■□□ 2.26
Trim9-208ENSMUST00000221370 Wwc2Q6NXJ0 1187 aa29.18■■■□□ 2.26
Trim9-208ENSMUST00000221370 Shroom2A2ALU4 1481 aa29.17■■■□□ 2.26
Trim9-208ENSMUST00000221370 Map3k4O08648 1597 aa29.16■■■□□ 2.26
Trim9-208ENSMUST00000221370 Wdr43Q6ZQL4 677 aaKnown RBP29.15■■■□□ 2.26
Trim9-208ENSMUST00000221370 Dapk1Q80YE7 1442 aa29.13■■■□□ 2.25
Trim9-208ENSMUST00000221370 Cc2d2bA0A286YDU8 1405 aa29.12■■■□□ 2.25
Trim9-208ENSMUST00000221370 Abcc2Q8VI47 1543 aa29.12■■■□□ 2.25
Trim9-208ENSMUST00000221370 Supt16hQ920B9 1047 aa29.12■■■□□ 2.25
Trim9-208ENSMUST00000221370 Kif14L0N7N1 1674 aaKnown RBP29.1■■■□□ 2.25
Trim9-208ENSMUST00000221370 Mapkbp1Q6NS57 1503 aa29.1■■■□□ 2.25
Trim9-208ENSMUST00000221370 Naip6Q9JIB6 1403 aa29.09■■■□□ 2.25
Trim9-208ENSMUST00000221370 Fam163aQ8CAA5 168 aa29.09■■■□□ 2.25
Trim9-208ENSMUST00000221370 Eif5bQ05D44 1216 aaKnown RBP29.09■■■□□ 2.25
Trim9-208ENSMUST00000221370 Trpm2Q91YD4 1506 aa29.08■■■□□ 2.25
Trim9-208ENSMUST00000221370 Dhx9O70133 1380 aaKnown RBP29.07■■■□□ 2.24
Trim9-208ENSMUST00000221370 Arhgap27A2AB59 869 aa29.07■■■□□ 2.24
Trim9-208ENSMUST00000221370 Pelp1Q9DBD5 1123 aaKnown RBP29.07■■■□□ 2.24
Trim9-208ENSMUST00000221370 Arhgap31A6X8Z5 1425 aa29.06■■■□□ 2.24
Trim9-208ENSMUST00000221370 Mug2P28666 1451 aa29.06■■■□□ 2.24
Trim9-208ENSMUST00000221370 Magi1Q6RHR9 1471 aa29.06■■■□□ 2.24
Trim9-208ENSMUST00000221370 Ppp4r2Q0VGB7 417 aa29.05■■■□□ 2.24
Trim9-208ENSMUST00000221370 Mlh3A0A1Y7VMP7 1443 aa29.04■■■□□ 2.24
Trim9-208ENSMUST00000221370 Ttll5Q8CHB8 1328 aa29.04■■■□□ 2.24
Trim9-208ENSMUST00000221370 Supt6hQ62383 1726 aaKnown RBP29.03■■■□□ 2.24
Trim9-208ENSMUST00000221370 Myom3A2ABU4 1439 aa29.02■■■□□ 2.24
Trim9-208ENSMUST00000221370 Rgl3Q3UYI5 709 aa28.99■■■□□ 2.23
Trim9-208ENSMUST00000221370 Wdr7Q920I9 1489 aa28.99■■■□□ 2.23
Trim9-208ENSMUST00000221370 Caskin1Q6P9K8 1431 aa28.99■■■□□ 2.23
Trim9-208ENSMUST00000221370 Rundc1Q0VDN7 615 aa28.99■■■□□ 2.23
Trim9-208ENSMUST00000221370 Ccdc141E9Q8Q6 1531 aa28.95■■■□□ 2.22
Trim9-208ENSMUST00000221370 Rock2P70336 1388 aa28.95■■■□□ 2.22
Trim9-208ENSMUST00000221370 Trak1Q6PD31 939 aa28.95■■■□□ 2.22
Trim9-208ENSMUST00000221370 Card11Q8CIS0 1159 aa28.94■■■□□ 2.22
Trim9-208ENSMUST00000221370 Cpsf1Q9EPU4 1441 aaKnown RBP28.94■■■□□ 2.22
Trim9-208ENSMUST00000221370 RalgapbQ8BQZ4 1484 aa28.94■■■□□ 2.22
Trim9-208ENSMUST00000221370 Nup155Q99P88 1391 aaKnown RBP28.93■■■□□ 2.22
Trim9-208ENSMUST00000221370 Mroh2aD3Z750 1679 aa28.92■■■□□ 2.22
Trim9-208ENSMUST00000221370 Prex2Q3LAC4 1598 aa28.9■■■□□ 2.22
Trim9-208ENSMUST00000221370 Tdrd9Q14BI7 1383 aa28.88■■■□□ 2.21
Trim9-208ENSMUST00000221370 Ofd1Q80Z25 1017 aa28.86■■■□□ 2.21
Trim9-208ENSMUST00000221370 P3h3Q8CG70 732 aa28.86■■■□□ 2.21
Trim9-208ENSMUST00000221370 Fmn2Q9JL04 1578 aa28.86■■■□□ 2.21
Trim9-208ENSMUST00000221370 Cdk13Q69ZA1 1511 aaKnown RBP28.84■■■□□ 2.21
Trim9-208ENSMUST00000221370 Polr3aB2RXC6 1390 aa28.84■■■□□ 2.21
Trim9-208ENSMUST00000221370 Rock1P70335 1354 aa28.81■■■□□ 2.2
Trim9-208ENSMUST00000221370 Adgrl2Q8JZZ7 1487 aa28.8■■■□□ 2.2
Trim9-208ENSMUST00000221370 Asxl1P59598 1514 aa28.8■■■□□ 2.2
Trim9-208ENSMUST00000221370 PtprgQ05909 1442 aa28.79■■■□□ 2.2
Trim9-208ENSMUST00000221370 Iqgap1Q9JKF1 1657 aaKnown RBP28.79■■■□□ 2.2
Trim9-208ENSMUST00000221370 Map4P27546 1125 aaKnown RBP28.79■■■□□ 2.2
Trim9-208ENSMUST00000221370 Liat1Q810M6 228 aa28.79■■■□□ 2.2
Trim9-208ENSMUST00000221370 Dot1lQ6XZL8 1540 aa28.77■■■□□ 2.2
Trim9-208ENSMUST00000221370 Gapvd1Q6PAR5 1458 aa28.76■■■□□ 2.19
Trim9-208ENSMUST00000221370 Zcchc11B2RX14 1644 aaKnown RBP28.75■■■□□ 2.19
Trim9-208ENSMUST00000221370 Lrrc9Q8CDN9 1456 aa28.74■■■□□ 2.19
Trim9-208ENSMUST00000221370 Grwd1Q810D6 446 aaKnown RBP28.72■■■□□ 2.19
Trim9-208ENSMUST00000221370 L3mbtl2P59178 703 aa28.71■■■□□ 2.19
Retrieved 100 of 22,080 RNA–protein pairs in 127.5 ms