RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Jph4Q80WT0 628 aa13.65□□□□□ -0.22
Usp47-206ENSMUST00000215510 Psme1P97371 249 aa13.64□□□□□ -0.23
Usp47-206ENSMUST00000215510 Armcx1Q9CX83 456 aa13.63□□□□□ -0.23
Usp47-206ENSMUST00000215510 Fan1Q69ZT1 1020 aa13.63□□□□□ -0.23
Usp47-206ENSMUST00000215510 Srcin1Q9QWI6 1250 aa13.63□□□□□ -0.23
Usp47-206ENSMUST00000215510 Dhx57Q6P5D3 1388 aaKnown RBP13.62□□□□□ -0.23
Usp47-206ENSMUST00000215510 Birc3O08863 600 aa13.62□□□□□ -0.23
Usp47-206ENSMUST00000215510 Dbr1Q923B1 550 aa13.62□□□□□ -0.23
Usp47-206ENSMUST00000215510 Tdrd9Q14BI7 1383 aa13.62□□□□□ -0.23
Usp47-206ENSMUST00000215510 Dcaf11Q91VU6 549 aa13.62□□□□□ -0.23
Usp47-206ENSMUST00000215510 Plekhh2Q8C115 1491 aa13.62□□□□□ -0.23
Usp47-206ENSMUST00000215510 Vsig10D3YX43 558 aa13.61□□□□□ -0.23
Usp47-206ENSMUST00000215510 SafbD3YXK2 937 aaKnown RBP13.61□□□□□ -0.23
Usp47-206ENSMUST00000215510 Senp3Q9EP97 568 aaKnown RBP13.61□□□□□ -0.23
Usp47-206ENSMUST00000215510 Rad54l2Q99NG0 1466 aa13.61□□□□□ -0.23
Usp47-206ENSMUST00000215510 4930567H17RikQ3V0K5 233 aa13.6□□□□□ -0.23
Usp47-206ENSMUST00000215510 Soga1E1U8D0 1418 aa13.6□□□□□ -0.23
Usp47-206ENSMUST00000215510 Slc4a3P16283 1227 aa13.59□□□□□ -0.23
Usp47-206ENSMUST00000215510 Fhad1A6PWD2 1420 aa13.57□□□□□ -0.24
Usp47-206ENSMUST00000215510 Speer4f1Q9D5Q6 258 aa13.57□□□□□ -0.24
Usp47-206ENSMUST00000215510 U2af1Q9D883 239 aaKnown RBP13.57□□□□□ -0.24
Usp47-206ENSMUST00000215510 CanxP35564 591 aaKnown RBP13.57□□□□□ -0.24
Usp47-206ENSMUST00000215510 Slc4a1apE9PX68 744 aa13.57□□□□□ -0.24
Usp47-206ENSMUST00000215510 Utp14aQ640M1 767 aaKnown RBP13.57□□□□□ -0.24
Usp47-206ENSMUST00000215510 Tmf1B9EKI3 1091 aa13.56□□□□□ -0.24
Usp47-206ENSMUST00000215510 U2surpQ6NV83 1029 aaKnown RBP13.56□□□□□ -0.24
Usp47-206ENSMUST00000215510 Iqcf3Q9D498 203 aa13.56□□□□□ -0.24
Usp47-206ENSMUST00000215510 1700123L14RikQ3V2K7 440 aa13.55□□□□□ -0.24
Usp47-206ENSMUST00000215510 Hsp90ab1P11499 724 aaKnown RBP13.55□□□□□ -0.24
Usp47-206ENSMUST00000215510 B4galnt3Q6L8S8 986 aa13.55□□□□□ -0.24
Usp47-206ENSMUST00000215510 Zscan21Q07231 555 aa13.54□□□□□ -0.24
Usp47-206ENSMUST00000215510 Urb2E9Q7L1 1524 aaKnown RBP13.54□□□□□ -0.24
Usp47-206ENSMUST00000215510 Spag9Q58A65 1321 aaKnown RBP13.53□□□□□ -0.24
Usp47-206ENSMUST00000215510 Rock2P70336 1388 aa13.53□□□□□ -0.24
Usp47-206ENSMUST00000215510 DekQ7TNV0 380 aaKnown RBP13.53□□□□□ -0.24
Usp47-206ENSMUST00000215510 Efcab5A0JP43 1406 aa13.53□□□□□ -0.24
Usp47-206ENSMUST00000215510 Usp47Q8BY87 1376 aa13.52□□□□□ -0.25
Usp47-206ENSMUST00000215510 Ggt6Q6PDE7 497 aa13.52□□□□□ -0.25
Usp47-206ENSMUST00000215510 Cc2d2bA0A286YDU8 1405 aa13.52□□□□□ -0.25
Usp47-206ENSMUST00000215510 Tmco5bQ80X59 307 aa13.5□□□□□ -0.25
Usp47-206ENSMUST00000215510 Zfp644E9QA22 1323 aa13.5□□□□□ -0.25
Usp47-206ENSMUST00000215510 Ythdc1E9Q5K9 736 aaKnown RBP13.5□□□□□ -0.25
Usp47-206ENSMUST00000215510 NudcO35685 332 aaKnown RBP13.49□□□□□ -0.25
Usp47-206ENSMUST00000215510 Fam71e1A1L3C1 212 aa13.48□□□□□ -0.25
Usp47-206ENSMUST00000215510 Rwdd1Q9CQK7 243 aa13.48□□□□□ -0.25
Usp47-206ENSMUST00000215510 UacaQ8CGB3 1411 aa13.47□□□□□ -0.25
Usp47-206ENSMUST00000215510 Duox2A2AQ99 1517 aa13.47□□□□□ -0.25
Usp47-206ENSMUST00000215510 Tnnt1O88346 262 aa13.47□□□□□ -0.25
Usp47-206ENSMUST00000215510 Shroom4Q1W617 1475 aa13.47□□□□□ -0.25
Usp47-206ENSMUST00000215510 Shq1Q7TMX5 569 aa13.46□□□□□ -0.25
Usp47-206ENSMUST00000215510 CrbnQ8C7D2 445 aa13.46□□□□□ -0.25
Usp47-206ENSMUST00000215510 Golga2Q921M4 999 aa13.46□□□□□ -0.25
Usp47-206ENSMUST00000215510 Rtf1A2AQ19 715 aaKnown RBP13.46□□□□□ -0.25
Usp47-206ENSMUST00000215510 Pibf1E9Q6K3 756 aa13.46□□□□□ -0.25
Usp47-206ENSMUST00000215510 Mak16Q8BGS0 296 aaKnown RBP13.46□□□□□ -0.25
Usp47-206ENSMUST00000215510 Pank3Q8R2W9 370 aa13.46□□□□□ -0.26
Usp47-206ENSMUST00000215510 Znf330Q922H9 316 aa13.45□□□□□ -0.26
Usp47-206ENSMUST00000215510 Inpp5dQ9ES52 1191 aa13.44□□□□□ -0.26
Usp47-206ENSMUST00000215510 Usp40Q8BWR4 1235 aa13.43□□□□□ -0.26
Usp47-206ENSMUST00000215510 Mink1Q9JM52 1308 aa13.43□□□□□ -0.26
Usp47-206ENSMUST00000215510 Frmpd1A2AKB4 1549 aa13.42□□□□□ -0.26
Usp47-206ENSMUST00000215510 Zfp777B9EKF4 885 aa13.42□□□□□ -0.26
Usp47-206ENSMUST00000215510 Dnajc5bQ9CQ94 199 aa13.42□□□□□ -0.26
Usp47-206ENSMUST00000215510 Cc2d2aQ8CFW7 1633 aa13.42□□□□□ -0.26
Usp47-206ENSMUST00000215510 Map3k5O35099 1380 aa13.41□□□□□ -0.26
Usp47-206ENSMUST00000215510 PtprkP35822 1457 aa13.4□□□□□ -0.26
Usp47-206ENSMUST00000215510 Cluap1Q8R3P7 413 aa13.4□□□□□ -0.26
Usp47-206ENSMUST00000215510 Q8BT18 775 aa13.39□□□□□ -0.27
Usp47-206ENSMUST00000215510 Q3TQI7 289 aaKnown RBP13.39□□□□□ -0.27
Usp47-206ENSMUST00000215510 Top2aQ01320 1528 aaKnown RBP13.39□□□□□ -0.27
Usp47-206ENSMUST00000215510 Pde4cQ3UEI1 686 aa13.39□□□□□ -0.27
Usp47-206ENSMUST00000215510 Tcerg1Q8CGF7 1100 aaKnown RBP13.39□□□□□ -0.27
Usp47-206ENSMUST00000215510 Chmp5Q9D7S9 219 aa13.38□□□□□ -0.27
Usp47-206ENSMUST00000215510 Arhgap31A6X8Z5 1425 aa13.38□□□□□ -0.27
Usp47-206ENSMUST00000215510 Ksr2Q3UVC0 959 aa13.37□□□□□ -0.27
Usp47-206ENSMUST00000215510 Rsph4aQ8BYM7 716 aa13.37□□□□□ -0.27
Usp47-206ENSMUST00000215510 Cabp4Q8VHC5 271 aa13.37□□□□□ -0.27
Usp47-206ENSMUST00000215510 Clstn1Q9EPL2 979 aa13.37□□□□□ -0.27
Usp47-206ENSMUST00000215510 PogzQ8BZH4 1409 aaKnown RBP13.37□□□□□ -0.27
Usp47-206ENSMUST00000215510 Hsp90b1P08113 802 aaKnown RBP13.36□□□□□ -0.27
Usp47-206ENSMUST00000215510 Supt16hQ920B9 1047 aa13.36□□□□□ -0.27
Usp47-206ENSMUST00000215510 CenpjQ569L8 1344 aa13.36□□□□□ -0.27
Usp47-206ENSMUST00000215510 Ap3b2Q9JME5 1082 aa13.36□□□□□ -0.27
Usp47-206ENSMUST00000215510 Naip1Q9QWK5 1403 aa13.36□□□□□ -0.27
Usp47-206ENSMUST00000215510 Tsen2Q6P7W5 460 aa13.36□□□□□ -0.27
Usp47-206ENSMUST00000215510 Mrc2Q64449 1479 aa13.35□□□□□ -0.27
Usp47-206ENSMUST00000215510 Chmp4bQ9D8B3 224 aaKnown RBP13.33□□□□□ -0.27
Usp47-206ENSMUST00000215510 BicraF8VPZ9 1578 aa13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 Ncoa2Q61026 1462 aa13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 Fam184bQ0KK56 942 aa13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 Dapk1Q80YE7 1442 aa13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 Plcb2A3KGF7 1181 aa13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 Hsp90aa1P07901 733 aaKnown RBP13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 Stard8Q8K031 1019 aa13.33□□□□□ -0.28
Usp47-206ENSMUST00000215510 HdgfP51859 237 aaKnown RBP13.32□□□□□ -0.28
Usp47-206ENSMUST00000215510 Fgd6Q69ZL1 1399 aa13.32□□□□□ -0.28
Usp47-206ENSMUST00000215510 Grin2bQ01097 1482 aa13.32□□□□□ -0.28
Usp47-206ENSMUST00000215510 Q9D9H8 365 aa13.32□□□□□ -0.28
Usp47-206ENSMUST00000215510 Plb1Q3TTY0 1478 aa13.32□□□□□ -0.28
Usp47-206ENSMUST00000215510 NrkQ9R0G8 1455 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms