RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Cnga1P29974 684 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Liat1Q810M6 228 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Ipo9Q91YE6 1041 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Usp47Q8BY87 1376 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Chrna2Q91X60 512 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Q7TT23 1179 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Nlrp6Q91WS2 869 aa12.37□□□□□ -0.43
Usp28-203ENSMUST00000213874 Atad2bE9Q166 1460 aaKnown RBP12.36□□□□□ -0.43
Usp28-203ENSMUST00000213874 L3mbtl2P59178 703 aa12.36□□□□□ -0.43
Usp28-203ENSMUST00000213874 Dnttip2Q8R2M2 758 aaKnown RBP12.36□□□□□ -0.43
Usp28-203ENSMUST00000213874 Mia2Q91ZV0 1396 aa12.35□□□□□ -0.43
Usp28-203ENSMUST00000213874 Arhgef5E9Q7D5 1581 aa12.35□□□□□ -0.43
Usp28-203ENSMUST00000213874 Egfem1Q8C088 590 aa12.35□□□□□ -0.43
Usp28-203ENSMUST00000213874 Ercc6F8VPZ5 1481 aa12.34□□□□□ -0.43
Usp28-203ENSMUST00000213874 DmtnQ9WV69 405 aa12.34□□□□□ -0.43
Usp28-203ENSMUST00000213874 Pdcl3Q8BVF2 240 aa12.33□□□□□ -0.44
Usp28-203ENSMUST00000213874 Rpgrip1lQ8CG73 1264 aa12.33□□□□□ -0.44
Usp28-203ENSMUST00000213874 Rrp7aQ9D1C9 280 aaKnown RBP12.33□□□□□ -0.44
Usp28-203ENSMUST00000213874 3425401B19RikD3Z1D3 1412 aa12.33□□□□□ -0.44
Usp28-203ENSMUST00000213874 Iqgap2Q3UQ44 1575 aa12.32□□□□□ -0.44
Usp28-203ENSMUST00000213874 Fyco1Q8VDC1 1437 aa12.32□□□□□ -0.44
Usp28-203ENSMUST00000213874 Znf316Q6PGE4 1016 aa12.32□□□□□ -0.44
Usp28-203ENSMUST00000213874 Kif27Q7M6Z4 1394 aa12.32□□□□□ -0.44
Usp28-203ENSMUST00000213874 Cux2P70298 1426 aa12.32□□□□□ -0.44
Usp28-203ENSMUST00000213874 Gm13695A2AK44 830 aa12.31□□□□□ -0.44
Usp28-203ENSMUST00000213874 Tcerg1Q8CGF7 1100 aaKnown RBP12.31□□□□□ -0.44
Usp28-203ENSMUST00000213874 Esx1O88933 382 aa12.31□□□□□ -0.44
Usp28-203ENSMUST00000213874 Vgll3P85442 326 aa12.3□□□□□ -0.44
Usp28-203ENSMUST00000213874 Rbm10Q99KG3 930 aaKnown RBP12.3□□□□□ -0.44
Usp28-203ENSMUST00000213874 CntlnA2AM05 1397 aa12.3□□□□□ -0.44
Usp28-203ENSMUST00000213874 Iqcf3Q9D498 203 aa12.3□□□□□ -0.44
Usp28-203ENSMUST00000213874 Rad54l2Q99NG0 1466 aa12.29□□□□□ -0.44
Usp28-203ENSMUST00000213874 CatipB9EKE5 520 aa12.29□□□□□ -0.44
Usp28-203ENSMUST00000213874 Washc2Q6PGL7 1334 aa12.29□□□□□ -0.44
Usp28-203ENSMUST00000213874 Scaf1Q5U4C3 1256 aaKnown RBP12.27□□□□□ -0.44
Usp28-203ENSMUST00000213874 Ifit1bl1D3Z6F0 470 aa12.27□□□□□ -0.45
Usp28-203ENSMUST00000213874 Dhx9O70133 1380 aaKnown RBP12.26□□□□□ -0.45
Usp28-203ENSMUST00000213874 Inpp5dQ9ES52 1191 aa12.26□□□□□ -0.45
Usp28-203ENSMUST00000213874 Atp1b4Q99ME6 356 aa12.25□□□□□ -0.45
Usp28-203ENSMUST00000213874 Mtus2Q3UHD3 1353 aa12.25□□□□□ -0.45
Usp28-203ENSMUST00000213874 Map4P27546 1125 aaKnown RBP12.24□□□□□ -0.45
Usp28-203ENSMUST00000213874 Shroom4Q1W617 1475 aa12.24□□□□□ -0.45
Usp28-203ENSMUST00000213874 Sart3Q9JLI8 962 aaKnown RBP12.24□□□□□ -0.45
Usp28-203ENSMUST00000213874 Slx4Q6P1D7 1565 aa12.24□□□□□ -0.45
Usp28-203ENSMUST00000213874 TimelessQ9R1X4 1197 aa12.23□□□□□ -0.45
Usp28-203ENSMUST00000213874 Hsp90ab1P11499 724 aaKnown RBP12.23□□□□□ -0.45
Usp28-203ENSMUST00000213874 Thoc2B1AZI6 1594 aaKnown RBP12.23□□□□□ -0.45
Usp28-203ENSMUST00000213874 Tiam1Q60610 1591 aa12.23□□□□□ -0.45
Usp28-203ENSMUST00000213874 Chmp5Q9D7S9 219 aa12.22□□□□□ -0.45
Usp28-203ENSMUST00000213874 PnisrA2AJT4 805 aaKnown RBP12.22□□□□□ -0.45
Usp28-203ENSMUST00000213874 Gtf2a1Q99PM3 378 aa12.22□□□□□ -0.45
Usp28-203ENSMUST00000213874 Pank3Q8R2W9 370 aa12.22□□□□□ -0.45
Usp28-203ENSMUST00000213874 Speer4f1Q9D5Q6 258 aa12.21□□□□□ -0.45
Usp28-203ENSMUST00000213874 Carmil1Q6EDY6 1374 aa12.21□□□□□ -0.45
Usp28-203ENSMUST00000213874 AU015836B2RUM3 263 aa12.21□□□□□ -0.45
Usp28-203ENSMUST00000213874 Zscan21Q07231 555 aa12.21□□□□□ -0.45
Usp28-203ENSMUST00000213874 Zfp444Q3TDV8 331 aaKnown RBP12.21□□□□□ -0.45
Usp28-203ENSMUST00000213874 Mroh3A0A1D5RM54 893 aa12.21□□□□□ -0.46
Usp28-203ENSMUST00000213874 Cluap1Q8R3P7 413 aa12.2□□□□□ -0.46
Usp28-203ENSMUST00000213874 Stk24Q99KH8 431 aa12.2□□□□□ -0.46
Usp28-203ENSMUST00000213874 Gm6268A2A3U9 297 aa12.2□□□□□ -0.46
Usp28-203ENSMUST00000213874 Fhad1A6PWD2 1420 aa12.19□□□□□ -0.46
Usp28-203ENSMUST00000213874 Dapk1Q80YE7 1442 aa12.19□□□□□ -0.46
Usp28-203ENSMUST00000213874 Cux1P53564 1515 aa12.18□□□□□ -0.46
Usp28-203ENSMUST00000213874 Slc4a1apE9PX68 744 aa12.18□□□□□ -0.46
Usp28-203ENSMUST00000213874 Ythdc1E9Q5K9 736 aaKnown RBP12.18□□□□□ -0.46
Usp28-203ENSMUST00000213874 Pcf11G3X9Z4 1553 aa12.18□□□□□ -0.46
Usp28-203ENSMUST00000213874 Ttll13A4Q9F6 804 aa12.18□□□□□ -0.46
Usp28-203ENSMUST00000213874 Eif2s2Q99L45 331 aaKnown RBP12.18□□□□□ -0.46
Usp28-203ENSMUST00000213874 Zfp91Q62511 572 aa12.17□□□□□ -0.46
Usp28-203ENSMUST00000213874 Cwc22Q8C5N3 908 aaKnown RBP12.17□□□□□ -0.46
Usp28-203ENSMUST00000213874 Znf330Q922H9 316 aa12.17□□□□□ -0.46
Usp28-203ENSMUST00000213874 Mak16Q8BGS0 296 aaKnown RBP12.17□□□□□ -0.46
Usp28-203ENSMUST00000213874 Gm7298A0A0N4SVU1 1476 aa12.17□□□□□ -0.46
Usp28-203ENSMUST00000213874 A2mQ6GQT1 1474 aa12.17□□□□□ -0.46
Usp28-203ENSMUST00000213874 LrpprcQ6PB66 1392 aaKnown RBP12.16□□□□□ -0.46
Usp28-203ENSMUST00000213874 Mroh2bQ7M6Y6 1581 aa12.16□□□□□ -0.46
Usp28-203ENSMUST00000213874 Rrp9Q91WM3 475 aaKnown RBP12.15□□□□□ -0.46
Usp28-203ENSMUST00000213874 Ttll5Q8CHB8 1328 aa12.14□□□□□ -0.47
Usp28-203ENSMUST00000213874 UacaQ8CGB3 1411 aa12.14□□□□□ -0.47
Usp28-203ENSMUST00000213874 TchhA0A0B4J1F9 1599 aa12.14□□□□□ -0.47
Usp28-203ENSMUST00000213874 Plin1Q8CGN5 517 aa12.14□□□□□ -0.47
Usp28-203ENSMUST00000213874 NrkQ9R0G8 1455 aa12.14□□□□□ -0.47
Usp28-203ENSMUST00000213874 Naip5Q9R016 1403 aa12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 DekQ7TNV0 380 aaKnown RBP12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 Kdm5bQ80Y84 1544 aa12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 Frmpd1A2AKB4 1549 aa12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 Vps8Q0P5W1 1427 aa12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 Naip2Q9QUK4 1447 aa12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 Q4VA45 678 aa12.13□□□□□ -0.47
Usp28-203ENSMUST00000213874 Phldb1Q6PDH0 1371 aaKnown RBP12.12□□□□□ -0.47
Usp28-203ENSMUST00000213874 Dcaf11Q91VU6 549 aa12.12□□□□□ -0.47
Usp28-203ENSMUST00000213874 Tdrd9Q14BI7 1383 aa12.12□□□□□ -0.47
Usp28-203ENSMUST00000213874 WrnO09053 1401 aa12.11□□□□□ -0.47
Usp28-203ENSMUST00000213874 Dnai1Q8C0M8 701 aa12.11□□□□□ -0.47
Usp28-203ENSMUST00000213874 Grin2bQ01097 1482 aa12.11□□□□□ -0.47
Usp28-203ENSMUST00000213874 Rwdd1Q9CQK7 243 aa12.1□□□□□ -0.47
Usp28-203ENSMUST00000213874 Ankrd36D3Z4K0 1415 aa12.1□□□□□ -0.47
Usp28-203ENSMUST00000213874 Gm20521D3Z5F7 333 aa12.09□□□□□ -0.47
Usp28-203ENSMUST00000213874 Stard8Q8K031 1019 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 112.2 ms