RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Kif27Q7M6Z4 1394 aa11.91□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Cabp1Q9JLK7 227 aa11.9□□□□□ -0.5
Scn8a-213ENSMUST00000201549 Tcerg1Q8CGF7 1100 aaKnown RBP11.89□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Ripply1Q2WG77 201 aa11.88□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Isy1Q69ZQ2 285 aaKnown RBP11.88□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Cnga1P29974 684 aa11.88□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Srpk2O54781 681 aaKnown RBP11.88□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Stk24Q99KH8 431 aa11.87□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Mical1Q8VDP3 1048 aa11.87□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Rpap1Q80TE0 1409 aa11.86□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Plcb2A3KGF7 1181 aa11.86□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Trak1Q6PD31 939 aa11.86□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Smg6P61406 1418 aaKnown RBP11.86□□□□□ -0.51
Scn8a-213ENSMUST00000201549 CntlnA2AM05 1397 aa11.86□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Ppm1gQ61074 542 aa11.85□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Ipo9Q91YE6 1041 aa11.85□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Smarca4Q3TKT4 1613 aaKnown RBP11.85□□□□□ -0.51
Scn8a-213ENSMUST00000201549 1700019A02RikA0A087WPV9 146 aa11.84□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Ppm1fQ8CGA0 452 aa11.84□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Rwdd1Q9CQK7 243 aa11.84□□□□□ -0.51
Scn8a-213ENSMUST00000201549 Map4P27546 1125 aaKnown RBP11.83□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Htatsf1Q8BGC0 757 aa11.82□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Ifit1bl1D3Z6F0 470 aa11.82□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Irx3P81067 507 aa11.82□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Exosc9Q9JHI7 438 aaKnown RBP11.82□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Pds5bQ4VA53 1446 aaKnown RBP11.82□□□□□ -0.52
Scn8a-213ENSMUST00000201549 ChgaP26339 463 aaKnown RBP11.81□□□□□ -0.52
Scn8a-213ENSMUST00000201549 IqubQ8CDK3 788 aa11.81□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Speer4f1Q9D5Q6 258 aa11.81□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Senp3Q9EP97 568 aaKnown RBP11.81□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Gm6268A2A3U9 297 aa11.8□□□□□ -0.52
Scn8a-213ENSMUST00000201549 PnnO35691 725 aaKnown RBP11.8□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Zscan21Q07231 555 aa11.79□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Stag3O70576 1240 aa11.79□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Chmp5Q9D7S9 219 aa11.79□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Ccnb3Q810T2 1396 aa11.77□□□□□ -0.52
Scn8a-213ENSMUST00000201549 CrbnQ8C7D2 445 aa11.77□□□□□ -0.52
Scn8a-213ENSMUST00000201549 Mak16Q8BGS0 296 aaKnown RBP11.77□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Usp47Q8BY87 1376 aa11.76□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Znf526Q8BI66 675 aa11.76□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Plin1Q8CGN5 517 aa11.76□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Mapk8ip3Q9ESN9 1337 aa11.76□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Dnai1Q8C0M8 701 aa11.76□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Arid4aF8VPQ2 1261 aaKnown RBP11.75□□□□□ -0.53
Scn8a-213ENSMUST00000201549 EspnQ9ET47 871 aa11.75□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Mbd3Q9Z2D8 285 aaKnown RBP11.75□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Fhad1A6PWD2 1420 aa11.75□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Tmf1B9EKI3 1091 aa11.74□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Znf710Q3U288 666 aa11.74□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Pes1Q9EQ61 584 aaKnown RBP11.74□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Top2aQ01320 1528 aaKnown RBP11.74□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Cux2P70298 1426 aa11.74□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Ncapd3Q6ZQK0 1506 aa11.73□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Mex3cQ05A36 652 aaKnown RBP11.73□□□□□ -0.53
Scn8a-213ENSMUST00000201549 MlecQ6ZQI3 291 aaKnown RBP11.73□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Plekhh2Q8C115 1491 aa11.72□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Sh3bp5Q9Z131 463 aa11.72□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Dnttip2Q8R2M2 758 aaKnown RBP11.71□□□□□ -0.53
Scn8a-213ENSMUST00000201549 Carmil1Q6EDY6 1374 aa11.71□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Ppp1r18Q8BQ30 594 aa11.71□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Iqgap2Q3UQ44 1575 aa11.7□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Map7O88735 730 aa11.7□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Nup155Q99P88 1391 aaKnown RBP11.7□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Dcaf11Q91VU6 549 aa11.69□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Rock2P70336 1388 aa11.69□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Samd1D3YXK1 519 aa11.69□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Pcmtd1P59913 357 aa11.69□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Cluap1Q8R3P7 413 aa11.69□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Anapc15P60007 132 aa11.69□□□□□ -0.54
Scn8a-213ENSMUST00000201549 AcrbpQ3V140 540 aa11.68□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Golga2Q921M4 999 aa11.67□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Znf330Q922H9 316 aa11.67□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Gtf2e1Q9D0D5 440 aa11.67□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Ipo8Q7TMY7 1010 aa11.67□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Stk26Q99JT2 416 aa11.66□□□□□ -0.54
Scn8a-213ENSMUST00000201549 UacaQ8CGB3 1411 aa11.66□□□□□ -0.54
Scn8a-213ENSMUST00000201549 Pank3Q8R2W9 370 aa11.66□□□□□ -0.54
Scn8a-213ENSMUST00000201549 AknaQ80VW7 1404 aa11.65□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Arap1Q4LDD4 1452 aa11.64□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Mfap1aC0HKD8 439 aaKnown RBP11.64□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Mfap1bC0HKD9 439 aaKnown RBP11.64□□□□□ -0.55
Scn8a-213ENSMUST00000201549 U2af1Q9D883 239 aaKnown RBP11.63□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Tmco5bQ80X59 307 aa11.63□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Fnbp4Q6ZQ03 1031 aa11.63□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Dapk1Q80YE7 1442 aa11.63□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Pak3Q61036 559 aa11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Eif4g2Q62448 906 aaKnown RBP11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Vps53Q8CCB4 832 aa11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Atad2bE9Q166 1460 aaKnown RBP11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Inpp5dQ9ES52 1191 aa11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 AU015836B2RUM3 263 aa11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 U2surpQ6NV83 1029 aaKnown RBP11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Srcin1Q9QWI6 1250 aa11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Rassf8Q8CJ96 419 aa11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 KnstrnQ9D9Z1 312 aaKnown RBP11.62□□□□□ -0.55
Scn8a-213ENSMUST00000201549 NudcO35685 332 aaKnown RBP11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Ankrd36D3Z4K0 1415 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Erich6bQ9D4S6 220 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Top2bQ64511 1612 aa11.61□□□□□ -0.55
Scn8a-213ENSMUST00000201549 Tnnt1O88346 262 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 170.1 ms