RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Fhad1A6PWD2 1420 aa11.04□□□□□ -0.64
Usp40-204ENSMUST00000187758 NclP09405 707 aaKnown RBP11.03□□□□□ -0.64
Usp40-204ENSMUST00000187758 Arhgef40Q3UPH7 1517 aa11.03□□□□□ -0.64
Usp40-204ENSMUST00000187758 Mlh3A0A1Y7VMP7 1443 aa11.03□□□□□ -0.64
Usp40-204ENSMUST00000187758 PtprtQ99M80 1454 aa11.03□□□□□ -0.64
Usp40-204ENSMUST00000187758 Tdrd9Q14BI7 1383 aa11.03□□□□□ -0.64
Usp40-204ENSMUST00000187758 Cep170Q6A065 1588 aa11.03□□□□□ -0.64
Usp40-204ENSMUST00000187758 NhsB1AV60 1647 aa11.02□□□□□ -0.64
Usp40-204ENSMUST00000187758 Vps8Q0P5W1 1427 aa11.02□□□□□ -0.65
Usp40-204ENSMUST00000187758 Atp10dQ8K2X1 1416 aa11.02□□□□□ -0.65
Usp40-204ENSMUST00000187758 Cabp1Q9JLK7 227 aa11.01□□□□□ -0.65
Usp40-204ENSMUST00000187758 Caskin1Q6P9K8 1431 aa11.01□□□□□ -0.65
Usp40-204ENSMUST00000187758 Ccer2J3QPU5 274 aa11.01□□□□□ -0.65
Usp40-204ENSMUST00000187758 Cul7Q8VE73 1689 aa11.01□□□□□ -0.65
Usp40-204ENSMUST00000187758 Wdr7Q920I9 1489 aa11.01□□□□□ -0.65
Usp40-204ENSMUST00000187758 Abcc5Q9R1X5 1436 aa11.01□□□□□ -0.65
Usp40-204ENSMUST00000187758 Kiaa1210E9Q0C6 1637 aa11□□□□□ -0.65
Usp40-204ENSMUST00000187758 Arhgap5P97393 1501 aa11□□□□□ -0.65
Usp40-204ENSMUST00000187758 AI481877A2ALV5 1481 aa11□□□□□ -0.65
Usp40-204ENSMUST00000187758 Arid3cA6PWV5 409 aa10.99□□□□□ -0.65
Usp40-204ENSMUST00000187758 Fam208aQ69ZR9 1610 aaKnown RBP10.99□□□□□ -0.65
Usp40-204ENSMUST00000187758 Kdm6bQ5NCY0 1641 aa10.98□□□□□ -0.65
Usp40-204ENSMUST00000187758 Gm156Q58A37 223 aa10.97□□□□□ -0.65
Usp40-204ENSMUST00000187758 Las1lA2BE28 776 aaKnown RBP10.97□□□□□ -0.65
Usp40-204ENSMUST00000187758 Eid3Q3V124 375 aa10.96□□□□□ -0.65
Usp40-204ENSMUST00000187758 Rfx7F8VPJ6 1459 aa10.96□□□□□ -0.65
Usp40-204ENSMUST00000187758 Znf608Q56A10 1511 aa10.95□□□□□ -0.66
Usp40-204ENSMUST00000187758 Il16O54824 1322 aa10.95□□□□□ -0.66
Usp40-204ENSMUST00000187758 Abca8bQ8K440 1620 aa10.95□□□□□ -0.66
Usp40-204ENSMUST00000187758 TonslQ6NZL6 1363 aa10.95□□□□□ -0.66
Usp40-204ENSMUST00000187758 Rnf17Q99MV7 1640 aa10.95□□□□□ -0.66
Usp40-204ENSMUST00000187758 Lrrc9Q8CDN9 1456 aa10.94□□□□□ -0.66
Usp40-204ENSMUST00000187758 Adgrl3Q80TS3 1537 aa10.94□□□□□ -0.66
Usp40-204ENSMUST00000187758 Cfap74Q3UY96 1578 aa10.92□□□□□ -0.66
Usp40-204ENSMUST00000187758 Sart1Q9Z315 806 aaKnown RBP10.92□□□□□ -0.66
Usp40-204ENSMUST00000187758 Kdm3bQ6ZPY7 1562 aa10.91□□□□□ -0.66
Usp40-204ENSMUST00000187758 Trappc8E9PWG2 1437 aa10.9□□□□□ -0.66
Usp40-204ENSMUST00000187758 Ttbk1Q6PCN3 1308 aa10.89□□□□□ -0.67
Usp40-204ENSMUST00000187758 Rrp7aQ9D1C9 280 aaKnown RBP10.89□□□□□ -0.67
Usp40-204ENSMUST00000187758 Gm32742A0A1B0GT42 1604 aa10.89□□□□□ -0.67
Usp40-204ENSMUST00000187758 SphkapQ6NSW3 1687 aa10.88□□□□□ -0.67
Usp40-204ENSMUST00000187758 Adgrb2Q8CGM1 1561 aa10.88□□□□□ -0.67
Usp40-204ENSMUST00000187758 Ankrd36D3Z4K0 1415 aa10.88□□□□□ -0.67
Usp40-204ENSMUST00000187758 Col17a1Q07563 1470 aa10.87□□□□□ -0.67
Usp40-204ENSMUST00000187758 Dennd4bQ3U1Y4 1499 aa10.87□□□□□ -0.67
Usp40-204ENSMUST00000187758 Fmn2Q9JL04 1578 aa10.86□□□□□ -0.67
Usp40-204ENSMUST00000187758 Ak9G3UYQ4 1894 aa10.86□□□□□ -0.67
Usp40-204ENSMUST00000187758 Mphosph9A6H5Y1 991 aa10.86□□□□□ -0.67
Usp40-204ENSMUST00000187758 Ppp1r18Q8BQ30 594 aa10.85□□□□□ -0.67
Usp40-204ENSMUST00000187758 Lemd3Q9WU40 921 aa10.85□□□□□ -0.67
Usp40-204ENSMUST00000187758 Zfyve16Q80U44 1528 aa10.85□□□□□ -0.67
Usp40-204ENSMUST00000187758 Zfp644E9QA22 1323 aa10.85□□□□□ -0.67
Usp40-204ENSMUST00000187758 Setbp1Q9Z180 1582 aa10.84□□□□□ -0.67
Usp40-204ENSMUST00000187758 Abcc3B2RX12 1523 aa10.84□□□□□ -0.67
Usp40-204ENSMUST00000187758 Pcgf6Q99NA9 353 aa10.84□□□□□ -0.67
Usp40-204ENSMUST00000187758 Pdcd11Q6NS46 1862 aaKnown RBP10.84□□□□□ -0.67
Usp40-204ENSMUST00000187758 Adgrl2Q8JZZ7 1487 aa10.84□□□□□ -0.67
Usp40-204ENSMUST00000187758 Zbtb7cQ8VCZ7 619 aa10.84□□□□□ -0.67
Usp40-204ENSMUST00000187758 Clstn2Q9ER65 966 aa10.83□□□□□ -0.68
Usp40-204ENSMUST00000187758 Hecw1Q8K4P8 1604 aa10.83□□□□□ -0.68
Usp40-204ENSMUST00000187758 Nup155Q99P88 1391 aaKnown RBP10.83□□□□□ -0.68
Usp40-204ENSMUST00000187758 Prdm16A2A935 1275 aa10.83□□□□□ -0.68
Usp40-204ENSMUST00000187758 Fhod3Q76LL6 1578 aa10.82□□□□□ -0.68
Usp40-204ENSMUST00000187758 Mast1Q9R1L5 1570 aa10.81□□□□□ -0.68
Usp40-204ENSMUST00000187758 Map4P27546 1125 aaKnown RBP10.81□□□□□ -0.68
Usp40-204ENSMUST00000187758 AlkP97793 1621 aa10.8□□□□□ -0.68
Usp40-204ENSMUST00000187758 Hspa5P20029 655 aaKnown RBP10.8□□□□□ -0.68
Usp40-204ENSMUST00000187758 Map3k5O35099 1380 aa10.8□□□□□ -0.68
Usp40-204ENSMUST00000187758 Neurl4Q5NCX5 1563 aa10.8□□□□□ -0.68
Usp40-204ENSMUST00000187758 Kidins220E9Q9B7 1793 aa10.79□□□□□ -0.68
Usp40-204ENSMUST00000187758 Pkd2O35245 966 aa10.79□□□□□ -0.68
Usp40-204ENSMUST00000187758 Abca9Q8K449 1623 aa10.79□□□□□ -0.68
Usp40-204ENSMUST00000187758 Spag9Q58A65 1321 aaKnown RBP10.78□□□□□ -0.68
Usp40-204ENSMUST00000187758 Wdr66E9Q743 1299 aa10.78□□□□□ -0.68
Usp40-204ENSMUST00000187758 Hnrnpul2Q00PI9 745 aaKnown RBP10.78□□□□□ -0.68
Usp40-204ENSMUST00000187758 Ssh2Q5SW75 1423 aa10.78□□□□□ -0.68
Usp40-204ENSMUST00000187758 Cdc42bpbQ7TT50 1713 aa10.78□□□□□ -0.68
Usp40-204ENSMUST00000187758 Pprc1Q6NZN1 1644 aa10.78□□□□□ -0.68
Usp40-204ENSMUST00000187758 OvosQ3UU35 1456 aa10.77□□□□□ -0.68
Usp40-204ENSMUST00000187758 Clasp1Q80TV8 1535 aaKnown RBP10.77□□□□□ -0.69
Usp40-204ENSMUST00000187758 Ttll5Q8CHB8 1328 aa10.77□□□□□ -0.69
Usp40-204ENSMUST00000187758 Depdc5P61460 1591 aa10.77□□□□□ -0.69
Usp40-204ENSMUST00000187758 Trak1Q6PD31 939 aa10.76□□□□□ -0.69
Usp40-204ENSMUST00000187758 Lamc1P02468 1607 aaKnown RBP10.75□□□□□ -0.69
Usp40-204ENSMUST00000187758 AglF8VPN4 1532 aa10.73□□□□□ -0.69
Usp40-204ENSMUST00000187758 Trpm2Q91YD4 1506 aa10.73□□□□□ -0.69
Usp40-204ENSMUST00000187758 Kif3bQ61771 747 aa10.72□□□□□ -0.69
Usp40-204ENSMUST00000187758 Usp47Q8BY87 1376 aa10.71□□□□□ -0.69
Usp40-204ENSMUST00000187758 Ttc37F8VPK0 1563 aa10.71□□□□□ -0.7
Usp40-204ENSMUST00000187758 Pde4cQ3UEI1 686 aa10.71□□□□□ -0.7
Usp40-204ENSMUST00000187758 Supt6hQ62383 1726 aaKnown RBP10.7□□□□□ -0.7
Usp40-204ENSMUST00000187758 Dhx9O70133 1380 aaKnown RBP10.7□□□□□ -0.7
Usp40-204ENSMUST00000187758 Kif21bQ9QXL1 1668 aa10.69□□□□□ -0.7
Usp40-204ENSMUST00000187758 Neurod1Q60867 357 aa10.69□□□□□ -0.7
Usp40-204ENSMUST00000187758 Nos1Q9Z0J4 1429 aa10.69□□□□□ -0.7
Usp40-204ENSMUST00000187758 Cd109Q8R422 1442 aa10.69□□□□□ -0.7
Usp40-204ENSMUST00000187758 Aebp2Q9Z248 504 aaKnown RBP10.69□□□□□ -0.7
Usp40-204ENSMUST00000187758 Rprd2Q6NXI6 1469 aaKnown RBP10.68□□□□□ -0.7
Usp40-204ENSMUST00000187758 Supt5hO55201 1082 aaKnown RBP10.68□□□□□ -0.7
Usp40-204ENSMUST00000187758 Usp54Q8BL06 1588 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms