RNA–Protein interactions for RNA: ENSMUST00000184458.7

Trps1-206, Transcript of Zinc finger transcription factor Trps1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trps1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1-206ENSMUST00000184458 Smarce1O54941 411 aaKnown RBP10.25□□□□□ -0.77
Trps1-206ENSMUST00000184458 1700019A02RikA0A087WPV9 146 aa10.25□□□□□ -0.77
Trps1-206ENSMUST00000184458 Fhad1A6PWD2 1420 aa10.25□□□□□ -0.77
Trps1-206ENSMUST00000184458 Ipo9Q91YE6 1041 aa10.24□□□□□ -0.77
Trps1-206ENSMUST00000184458 Iffo2Q8R2V2 512 aa10.24□□□□□ -0.77
Trps1-206ENSMUST00000184458 Supt16hQ920B9 1047 aa10.24□□□□□ -0.77
Trps1-206ENSMUST00000184458 Rsf1E9PWW9 1441 aaKnown RBP10.24□□□□□ -0.77
Trps1-206ENSMUST00000184458 Rtf1A2AQ19 715 aaKnown RBP10.24□□□□□ -0.77
Trps1-206ENSMUST00000184458 Cspp1B2RX88 1205 aa10.23□□□□□ -0.77
Trps1-206ENSMUST00000184458 Rrp7aQ9D1C9 280 aaKnown RBP10.23□□□□□ -0.77
Trps1-206ENSMUST00000184458 Atp6v1dP57746 247 aa10.22□□□□□ -0.77
Trps1-206ENSMUST00000184458 Ipo8Q7TMY7 1010 aa10.22□□□□□ -0.77
Trps1-206ENSMUST00000184458 Rb1cc1Q9ESK9 1588 aa10.22□□□□□ -0.77
Trps1-206ENSMUST00000184458 Kiaa0754Q69ZZ9 979 aa10.21□□□□□ -0.77
Trps1-206ENSMUST00000184458 Ccdc18Q640L5 1455 aa10.2□□□□□ -0.78
Trps1-206ENSMUST00000184458 Golga3P55937 1487 aa10.2□□□□□ -0.78
Trps1-206ENSMUST00000184458 Tpm3P21107 285 aaKnown RBP10.2□□□□□ -0.78
Trps1-206ENSMUST00000184458 Stk24Q99KH8 431 aa10.2□□□□□ -0.78
Trps1-206ENSMUST00000184458 Becn1O88597 448 aa10.19□□□□□ -0.78
Trps1-206ENSMUST00000184458 CgnP59242 1191 aa10.19□□□□□ -0.78
Trps1-206ENSMUST00000184458 Nol10Q5RJG1 687 aaKnown RBP10.19□□□□□ -0.78
Trps1-206ENSMUST00000184458 NgefQ8CHT1 710 aa10.19□□□□□ -0.78
Trps1-206ENSMUST00000184458 Speer4f1Q9D5Q6 258 aa10.19□□□□□ -0.78
Trps1-206ENSMUST00000184458 MecomP14404 1042 aa10.18□□□□□ -0.78
Trps1-206ENSMUST00000184458 Trim30aP15533 496 aa10.18□□□□□ -0.78
Trps1-206ENSMUST00000184458 Zscan21Q07231 555 aa10.18□□□□□ -0.78
Trps1-206ENSMUST00000184458 Tmf1B9EKI3 1091 aa10.17□□□□□ -0.78
Trps1-206ENSMUST00000184458 VgfQ0VGU4 617 aa10.17□□□□□ -0.78
Trps1-206ENSMUST00000184458 Kif15Q6P9L6 1387 aa10.17□□□□□ -0.78
Trps1-206ENSMUST00000184458 Arhgap27A2AB59 869 aa10.17□□□□□ -0.78
Trps1-206ENSMUST00000184458 Glipr1l2Q9CQ35 332 aa10.15□□□□□ -0.79
Trps1-206ENSMUST00000184458 SafbD3YXK2 937 aaKnown RBP10.14□□□□□ -0.79
Trps1-206ENSMUST00000184458 Slc4a3P16283 1227 aa10.14□□□□□ -0.79
Trps1-206ENSMUST00000184458 Cgnl1Q6AW69 1298 aa10.14□□□□□ -0.79
Trps1-206ENSMUST00000184458 Gtf2e1Q9D0D5 440 aa10.14□□□□□ -0.79
Trps1-206ENSMUST00000184458 Ftsj3Q9DBE9 838 aaKnown RBP10.14□□□□□ -0.79
Trps1-206ENSMUST00000184458 U2surpQ6NV83 1029 aaKnown RBP10.13□□□□□ -0.79
Trps1-206ENSMUST00000184458 Ush1cQ9ES64 910 aa10.13□□□□□ -0.79
Trps1-206ENSMUST00000184458 Spag9Q58A65 1321 aaKnown RBP10.13□□□□□ -0.79
Trps1-206ENSMUST00000184458 Cnga1P29974 684 aa10.13□□□□□ -0.79
Trps1-206ENSMUST00000184458 Q3TQI7 289 aaKnown RBP10.13□□□□□ -0.79
Trps1-206ENSMUST00000184458 Mfap1aC0HKD8 439 aaKnown RBP10.12□□□□□ -0.79
Trps1-206ENSMUST00000184458 Mfap1bC0HKD9 439 aaKnown RBP10.12□□□□□ -0.79
Trps1-206ENSMUST00000184458 Golga2Q921M4 999 aa10.12□□□□□ -0.79
Trps1-206ENSMUST00000184458 Rundc1Q0VDN7 615 aa10.12□□□□□ -0.79
Trps1-206ENSMUST00000184458 U2af1Q9D883 239 aaKnown RBP10.11□□□□□ -0.79
Trps1-206ENSMUST00000184458 Ccdc47Q9D024 483 aaKnown RBP10.11□□□□□ -0.79
Trps1-206ENSMUST00000184458 Map4P27546 1125 aaKnown RBP10.11□□□□□ -0.79
Trps1-206ENSMUST00000184458 Tmco5bQ80X59 307 aa10.11□□□□□ -0.79
Trps1-206ENSMUST00000184458 Rsph3aQ3UFY4 516 aa10.1□□□□□ -0.79
Trps1-206ENSMUST00000184458 Tpm1P58771 284 aa10.1□□□□□ -0.79
Trps1-206ENSMUST00000184458 Ccar1Q8CH18 1146 aaKnown RBP10.1□□□□□ -0.79
Trps1-206ENSMUST00000184458 Exoc6Q8R313 802 aa10.1□□□□□ -0.79
Trps1-206ENSMUST00000184458 Ccer1Q9CQL2 403 aa10.1□□□□□ -0.79
Trps1-206ENSMUST00000184458 Pkd2O35245 966 aa10.09□□□□□ -0.79
Trps1-206ENSMUST00000184458 CrebrfQ8CDG5 640 aaKnown RBP10.09□□□□□ -0.79
Trps1-206ENSMUST00000184458 Hspa5P20029 655 aaKnown RBP10.09□□□□□ -0.79
Trps1-206ENSMUST00000184458 HdgfP51859 237 aaKnown RBP10.09□□□□□ -0.79
Trps1-206ENSMUST00000184458 Ccdc34Q3UI66 367 aa10.09□□□□□ -0.79
Trps1-206ENSMUST00000184458 Tpm2P58774 284 aa10.08□□□□□ -0.8
Trps1-206ENSMUST00000184458 Sf3a1Q8K4Z5 791 aaKnown RBP10.08□□□□□ -0.8
Trps1-206ENSMUST00000184458 Ipo7Q9EPL8 1038 aaKnown RBP10.08□□□□□ -0.8
Trps1-206ENSMUST00000184458 Tpd52l1O54818 204 aa10.08□□□□□ -0.8
Trps1-206ENSMUST00000184458 SlkO54988 1233 aa10.08□□□□□ -0.8
Trps1-206ENSMUST00000184458 AampJ3QN89 436 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 A0A1L1SQF0 893 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 Tpm4Q6IRU2 248 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 Cluap1Q8R3P7 413 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 Noc3lQ8VI84 807 aaKnown RBP10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 Ercc6F8VPZ5 1481 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 St18Q80TY4 1045 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 Stard8Q8K031 1019 aa10.07□□□□□ -0.8
Trps1-206ENSMUST00000184458 Srek1Q8BZX4 494 aaKnown RBP10.06□□□□□ -0.8
Trps1-206ENSMUST00000184458 MyclP10166 368 aa10.06□□□□□ -0.8
Trps1-206ENSMUST00000184458 Gpatch11Q3UFS4 262 aa10.06□□□□□ -0.8
Trps1-206ENSMUST00000184458 Dusp9Q7TNL7 452 aa10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 Brpf1B2RRD7 1212 aa10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 Zrsr2Q62377 462 aaKnown RBP10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 CntlnA2AM05 1397 aa10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 Rock2P70336 1388 aa10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 Ylpm1Q9R0I7 1386 aaKnown RBP10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 GorabQ8BRM2 368 aa10.05□□□□□ -0.8
Trps1-206ENSMUST00000184458 Nap1l3Q794H2 544 aa10.04□□□□□ -0.8
Trps1-206ENSMUST00000184458 Ifit1bl1D3Z6F0 470 aa10.04□□□□□ -0.8
Trps1-206ENSMUST00000184458 Gtf3c3Q3TMP1 882 aa10.04□□□□□ -0.8
Trps1-206ENSMUST00000184458 Evc2Q8K1G2 1220 aa10.04□□□□□ -0.8
Trps1-206ENSMUST00000184458 Kif27Q7M6Z4 1394 aa10.03□□□□□ -0.8
Trps1-206ENSMUST00000184458 Rsph4aQ8BYM7 716 aa10.03□□□□□ -0.8
Trps1-206ENSMUST00000184458 Gm21969J3QJZ1 289 aa10.03□□□□□ -0.8
Trps1-206ENSMUST00000184458 Taf3Q5HZG4 932 aa10.03□□□□□ -0.8
Trps1-206ENSMUST00000184458 Mre11Q61216 706 aa10.03□□□□□ -0.8
Trps1-206ENSMUST00000184458 Dcaf11Q91VU6 549 aa10.03□□□□□ -0.8
Trps1-206ENSMUST00000184458 Cplx2P84086 134 aa10.02□□□□□ -0.8
Trps1-206ENSMUST00000184458 Filip1lQ6P6L0 1131 aa10.02□□□□□ -0.81
Trps1-206ENSMUST00000184458 Sh3bgrQ9WUZ7 214 aa10.02□□□□□ -0.81
Trps1-206ENSMUST00000184458 Chmp3Q9CQ10 224 aa10.01□□□□□ -0.81
Trps1-206ENSMUST00000184458 Fyco1Q8VDC1 1437 aa10.01□□□□□ -0.81
Trps1-206ENSMUST00000184458 Ksr2Q3UVC0 959 aa10.01□□□□□ -0.81
Trps1-206ENSMUST00000184458 Fbxo2Q80UW2 297 aa10.01□□□□□ -0.81
Trps1-206ENSMUST00000184458 Isy1Q69ZQ2 285 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms