RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Naip2Q9QUK4 1447 aa13.55□□□□□ -0.24
Trim40-203ENSMUST00000172711 Ankrd26Q811D2 1581 aa13.53□□□□□ -0.24
Trim40-203ENSMUST00000172711 BlmO88700 1416 aa13.52□□□□□ -0.24
Trim40-203ENSMUST00000172711 Abca9Q8K449 1623 aa13.52□□□□□ -0.25
Trim40-203ENSMUST00000172711 Cep162Q6ZQ06 1403 aa13.52□□□□□ -0.25
Trim40-203ENSMUST00000172711 Prex2Q3LAC4 1598 aa13.51□□□□□ -0.25
Trim40-203ENSMUST00000172711 Arap1Q4LDD4 1452 aa13.5□□□□□ -0.25
Trim40-203ENSMUST00000172711 Kif14L0N7N1 1674 aaKnown RBP13.49□□□□□ -0.25
Trim40-203ENSMUST00000172711 Adamtsl3G3UXC7 1706 aa13.49□□□□□ -0.25
Trim40-203ENSMUST00000172711 Mlh3A0A1Y7VMP7 1443 aa13.48□□□□□ -0.25
Trim40-203ENSMUST00000172711 Ncoa2Q61026 1462 aa13.48□□□□□ -0.25
Trim40-203ENSMUST00000172711 Myt1lP97500 1187 aa13.48□□□□□ -0.25
Trim40-203ENSMUST00000172711 Magi1Q6RHR9 1471 aa13.47□□□□□ -0.25
Trim40-203ENSMUST00000172711 Cul9Q80TT8 1865 aa13.46□□□□□ -0.26
Trim40-203ENSMUST00000172711 Kiaa0556Q8C753 1610 aa13.45□□□□□ -0.26
Trim40-203ENSMUST00000172711 Aebp1Q640N1 1128 aa13.44□□□□□ -0.26
Trim40-203ENSMUST00000172711 Neurl4Q5NCX5 1563 aa13.44□□□□□ -0.26
Trim40-203ENSMUST00000172711 Kif27Q7M6Z4 1394 aa13.44□□□□□ -0.26
Trim40-203ENSMUST00000172711 Synj2Q9D2G5 1434 aa13.44□□□□□ -0.26
Trim40-203ENSMUST00000172711 PtprmP28828 1452 aa13.44□□□□□ -0.26
Trim40-203ENSMUST00000172711 Fam208aQ69ZR9 1610 aaKnown RBP13.41□□□□□ -0.26
Trim40-203ENSMUST00000172711 Ncoa3O09000 1398 aa13.4□□□□□ -0.26
Trim40-203ENSMUST00000172711 Yeats2Q3TUF7 1407 aa13.39□□□□□ -0.27
Trim40-203ENSMUST00000172711 Lmo7E9PYF4 1699 aaKnown RBP13.38□□□□□ -0.27
Trim40-203ENSMUST00000172711 Erich3F6QRE9 1637 aa13.37□□□□□ -0.27
Trim40-203ENSMUST00000172711 Cdc42bpaQ3UU96 1719 aa13.37□□□□□ -0.27
Trim40-203ENSMUST00000172711 Camsap2Q8C1B1 1461 aa13.36□□□□□ -0.27
Trim40-203ENSMUST00000172711 Ptch1Q61115 1434 aa13.35□□□□□ -0.27
Trim40-203ENSMUST00000172711 Ahdc1Q6PAL7 1594 aaKnown RBP13.34□□□□□ -0.27
Trim40-203ENSMUST00000172711 Dip2cE9PWR4 1557 aa13.33□□□□□ -0.27
Trim40-203ENSMUST00000172711 Pcf11G3X9Z4 1553 aa13.33□□□□□ -0.27
Trim40-203ENSMUST00000172711 Kidins220E9Q9B7 1793 aa13.33□□□□□ -0.28
Trim40-203ENSMUST00000172711 MyclP10166 368 aa13.33□□□□□ -0.28
Trim40-203ENSMUST00000172711 Fbxo41Q6NS60 873 aa13.33□□□□□ -0.28
Trim40-203ENSMUST00000172711 Mug1P28665 1476 aa13.33□□□□□ -0.28
Trim40-203ENSMUST00000172711 SphkapQ6NSW3 1687 aa13.33□□□□□ -0.28
Trim40-203ENSMUST00000172711 Kiaa1551Q5DTW7 1521 aa13.32□□□□□ -0.28
Trim40-203ENSMUST00000172711 Fam163aQ8CAA5 168 aa13.32□□□□□ -0.28
Trim40-203ENSMUST00000172711 Atp10aO54827 1508 aa13.32□□□□□ -0.28
Trim40-203ENSMUST00000172711 Ap3b1Q9Z1T1 1105 aa13.31□□□□□ -0.28
Trim40-203ENSMUST00000172711 NpatQ8BMA5 1420 aa13.31□□□□□ -0.28
Trim40-203ENSMUST00000172711 RereQ80TZ9 1558 aa13.31□□□□□ -0.28
Trim40-203ENSMUST00000172711 Supt6hQ62383 1726 aaKnown RBP13.3□□□□□ -0.28
Trim40-203ENSMUST00000172711 OvosQ3UU35 1456 aa13.3□□□□□ -0.28
Trim40-203ENSMUST00000172711 Setd5Q5XJV7 1441 aa13.29□□□□□ -0.28
Trim40-203ENSMUST00000172711 Zmym4A2A791 1549 aaKnown RBP13.28□□□□□ -0.28
Trim40-203ENSMUST00000172711 Arhgap5P97393 1501 aa13.28□□□□□ -0.28
Trim40-203ENSMUST00000172711 Kdm5cP41230 1554 aa13.28□□□□□ -0.28
Trim40-203ENSMUST00000172711 Cfap65Q3V0B4 1847 aa13.27□□□□□ -0.29
Trim40-203ENSMUST00000172711 Scn4aQ9ER60 1841 aa13.27□□□□□ -0.29
Trim40-203ENSMUST00000172711 Ncapd3Q6ZQK0 1506 aa13.27□□□□□ -0.29
Trim40-203ENSMUST00000172711 Chrna2Q91X60 512 aa13.25□□□□□ -0.29
Trim40-203ENSMUST00000172711 Safb2Q80YR5 991 aaKnown RBP13.23□□□□□ -0.29
Trim40-203ENSMUST00000172711 Lemd3Q9WU40 921 aa13.23□□□□□ -0.29
Trim40-203ENSMUST00000172711 Dhx57Q6P5D3 1388 aaKnown RBP13.23□□□□□ -0.29
Trim40-203ENSMUST00000172711 Trappc8E9PWG2 1437 aa13.23□□□□□ -0.29
Trim40-203ENSMUST00000172711 Gm32742A0A1B0GT42 1604 aa13.21□□□□□ -0.3
Trim40-203ENSMUST00000172711 Znf219Q6IQX8 726 aa13.2□□□□□ -0.3
Trim40-203ENSMUST00000172711 Pdcd11Q6NS46 1862 aaKnown RBP13.2□□□□□ -0.3
Trim40-203ENSMUST00000172711 Atf5O70191 283 aa13.19□□□□□ -0.3
Trim40-203ENSMUST00000172711 4930407I10RikD3Z5T8 1512 aa13.18□□□□□ -0.3
Trim40-203ENSMUST00000172711 Gm1043A0A140LJC2 1431 aa13.18□□□□□ -0.3
Trim40-203ENSMUST00000172711 Abca6Q8K441 1624 aa13.18□□□□□ -0.3
Trim40-203ENSMUST00000172711 Abcc3B2RX12 1523 aa13.18□□□□□ -0.3
Trim40-203ENSMUST00000172711 NexmifQ5DTT1 1515 aa13.18□□□□□ -0.3
Trim40-203ENSMUST00000172711 Dip2aQ8BWT5 1523 aa13.17□□□□□ -0.3
Trim40-203ENSMUST00000172711 Topaz1E5FYH1 1653 aa13.16□□□□□ -0.3
Trim40-203ENSMUST00000172711 Lmod2Q3UHZ5 550 aa13.16□□□□□ -0.3
Trim40-203ENSMUST00000172711 Eea1Q8BL66 1411 aa13.16□□□□□ -0.3
Trim40-203ENSMUST00000172711 Peg3Q3URU2 1571 aa13.16□□□□□ -0.3
Trim40-203ENSMUST00000172711 Tiam1Q60610 1591 aa13.15□□□□□ -0.3
Trim40-203ENSMUST00000172711 Cdc42bpbQ7TT50 1713 aa13.15□□□□□ -0.3
Trim40-203ENSMUST00000172711 Hecw1Q8K4P8 1604 aa13.15□□□□□ -0.3
Trim40-203ENSMUST00000172711 Myom2Q14BI5 1463 aa13.15□□□□□ -0.3
Trim40-203ENSMUST00000172711 HrcG5E8J6 738 aa13.14□□□□□ -0.31
Trim40-203ENSMUST00000172711 Ppp4r2Q0VGB7 417 aa13.14□□□□□ -0.31
Trim40-203ENSMUST00000172711 Talpid3E9PV87 1520 aa13.13□□□□□ -0.31
Trim40-203ENSMUST00000172711 Tdrd9Q14BI7 1383 aa13.13□□□□□ -0.31
Trim40-203ENSMUST00000172711 Dip2bQ3UH60 1574 aa13.13□□□□□ -0.31
Trim40-203ENSMUST00000172711 Dennd4bQ3U1Y4 1499 aa13.12□□□□□ -0.31
Trim40-203ENSMUST00000172711 Trpm1Q2TV84 1622 aa13.11□□□□□ -0.31
Trim40-203ENSMUST00000172711 Adcy10Q8C0T9 1614 aa13.11□□□□□ -0.31
Trim40-203ENSMUST00000172711 Ecm2Q5FW85 670 aa13.11□□□□□ -0.31
Trim40-203ENSMUST00000172711 Afap1Q80YS6 731 aa13.11□□□□□ -0.31
Trim40-203ENSMUST00000172711 Hs6st3Q9QYK4 470 aa13.11□□□□□ -0.31
Trim40-203ENSMUST00000172711 Arhgef40Q3UPH7 1517 aa13.11□□□□□ -0.31
Trim40-203ENSMUST00000172711 Rsph4aQ8BYM7 716 aa13.1□□□□□ -0.31
Trim40-203ENSMUST00000172711 Ltbp4Q8K4G1 1666 aa13.1□□□□□ -0.31
Trim40-203ENSMUST00000172711 Cfap74Q3UY96 1578 aa13.09□□□□□ -0.31
Trim40-203ENSMUST00000172711 CntlnA2AM05 1397 aa13.09□□□□□ -0.31
Trim40-203ENSMUST00000172711 Pip4k2bQ80XI4 416 aa13.08□□□□□ -0.32
Trim40-203ENSMUST00000172711 Cdc42bpgQ80UW5 1551 aa13.07□□□□□ -0.32
Trim40-203ENSMUST00000172711 Sart1Q9Z315 806 aaKnown RBP13.07□□□□□ -0.32
Trim40-203ENSMUST00000172711 Map3k5O35099 1380 aa13.06□□□□□ -0.32
Trim40-203ENSMUST00000172711 CltcQ68FD5 1675 aaKnown RBP13.05□□□□□ -0.32
Trim40-203ENSMUST00000172711 Fam71e1A1L3C1 212 aa13.05□□□□□ -0.32
Trim40-203ENSMUST00000172711 Ehmt2Q9Z148 1263 aaKnown RBP13.05□□□□□ -0.32
Trim40-203ENSMUST00000172711 RictorQ6QI06 1708 aa13.03□□□□□ -0.32
Trim40-203ENSMUST00000172711 Cypt1Q8CH20 168 aa13.03□□□□□ -0.32
Trim40-203ENSMUST00000172711 Naip1Q9QWK5 1403 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 189.5 ms