RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Gm13695A2AK44 830 aa23.83■■□□□ 1.41
Ckap4-202ENSMUST00000167671 CadpsQ80TJ1 1355 aa23.83■■□□□ 1.4
Ckap4-202ENSMUST00000167671 Ifnlr1Q8CGK5 535 aa23.81■■□□□ 1.4
Ckap4-202ENSMUST00000167671 Mug1P28665 1476 aa23.8■■□□□ 1.4
Ckap4-202ENSMUST00000167671 Gcc2Q8CHG3 1679 aa23.78■■□□□ 1.4
Ckap4-202ENSMUST00000167671 Pla2r1Q62028 1487 aa23.78■■□□□ 1.4
Ckap4-202ENSMUST00000167671 Ift140E9PY46 1464 aa23.77■■□□□ 1.4
Ckap4-202ENSMUST00000167671 Abca5Q8K448 1642 aa23.75■■□□□ 1.39
Ckap4-202ENSMUST00000167671 Rprd2Q6NXI6 1469 aaKnown RBP23.75■■□□□ 1.39
Ckap4-202ENSMUST00000167671 Setbp1Q9Z180 1582 aa23.75■■□□□ 1.39
Ckap4-202ENSMUST00000167671 Pak3Q61036 559 aa23.73■■□□□ 1.39
Ckap4-202ENSMUST00000167671 Rfx7F8VPJ6 1459 aa23.71■■□□□ 1.39
Ckap4-202ENSMUST00000167671 Abcc5Q9R1X5 1436 aa23.71■■□□□ 1.39
Ckap4-202ENSMUST00000167671 Slc4a3P16283 1227 aa23.7■■□□□ 1.38
Ckap4-202ENSMUST00000167671 PnisrA2AJT4 805 aaKnown RBP23.69■■□□□ 1.38
Ckap4-202ENSMUST00000167671 Rgl3Q3UYI5 709 aa23.69■■□□□ 1.38
Ckap4-202ENSMUST00000167671 Plekhh2Q8C115 1491 aa23.68■■□□□ 1.38
Ckap4-202ENSMUST00000167671 Liat1Q810M6 228 aa23.66■■□□□ 1.38
Ckap4-202ENSMUST00000167671 WizO88286 1684 aaKnown RBP23.66■■□□□ 1.38
Ckap4-202ENSMUST00000167671 Kif21aQ9QXL2 1672 aa23.65■■□□□ 1.38
Ckap4-202ENSMUST00000167671 Magi3Q9EQJ9 1476 aa23.64■■□□□ 1.38
Ckap4-202ENSMUST00000167671 Ofd1Q80Z25 1017 aa23.63■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Arhgef40Q3UPH7 1517 aa23.63■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Mtus2Q3UHD3 1353 aa23.62■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Fam135aQ6NS59 1506 aa23.62■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Grin2aP35436 1464 aa23.6■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Ncoa3O09000 1398 aa23.59■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Kdm6bQ5NCY0 1641 aa23.59■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Dhx9O70133 1380 aaKnown RBP23.59■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Pik3c2gO70167 1506 aa23.59■■□□□ 1.37
Ckap4-202ENSMUST00000167671 Rundc1Q0VDN7 615 aa23.58■■□□□ 1.37
Ckap4-202ENSMUST00000167671 WrnO09053 1401 aa23.58■■□□□ 1.36
Ckap4-202ENSMUST00000167671 SphkapQ6NSW3 1687 aa23.57■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Dapk1Q80YE7 1442 aa23.56■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Kcnh8P59111 1102 aa23.56■■□□□ 1.36
Ckap4-202ENSMUST00000167671 PxdnQ3UQ28 1475 aa23.55■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Soga1E1U8D0 1418 aa23.54■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Cwc22Q8C5N3 908 aaKnown RBP23.53■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Disp1Q3TDN0 1521 aa23.53■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Adgrb2Q8CGM1 1561 aa23.53■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Egfem1Q8C088 590 aa23.52■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Grwd1Q810D6 446 aaKnown RBP23.52■■□□□ 1.36
Ckap4-202ENSMUST00000167671 Card11Q8CIS0 1159 aa23.51■■□□□ 1.35
Ckap4-202ENSMUST00000167671 L3mbtl2P59178 703 aa23.51■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Trak1Q6PD31 939 aa23.5■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Adamts12Q811B3 1600 aa23.5■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Plekhg5Q66T02 1073 aa23.5■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Kif14L0N7N1 1674 aaKnown RBP23.48■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Ttbk1Q6PCN3 1308 aa23.47■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Ttll5Q8CHB8 1328 aa23.47■■□□□ 1.35
Ckap4-202ENSMUST00000167671 AlkP97793 1621 aa23.47■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Arhgap27A2AB59 869 aa23.47■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Plb1Q3TTY0 1478 aa23.47■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Kdm3bQ6ZPY7 1562 aa23.46■■□□□ 1.35
Ckap4-202ENSMUST00000167671 Adcy10Q8C0T9 1614 aa23.45■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Dhx57Q6P5D3 1388 aaKnown RBP23.44■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Lamc1P02468 1607 aaKnown RBP23.44■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Zbtb4Q5F293 982 aa23.43■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Mug2P28666 1451 aa23.43■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Il16O54824 1322 aa23.42■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Rapgef6Q5NCJ1 1609 aa23.42■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Supt6hQ62383 1726 aaKnown RBP23.4■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Myom3A2ABU4 1439 aa23.39■■□□□ 1.34
Ckap4-202ENSMUST00000167671 Mbd5B1AYB6 1498 aa23.39■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Cc2d2bA0A286YDU8 1405 aa23.38■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Kif21bQ9QXL1 1668 aa23.38■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Zbtb7cQ8VCZ7 619 aa23.38■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Abca16E9PWJ7 1678 aa23.37■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Naip6Q9JIB6 1403 aa23.37■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Cdk13Q69ZA1 1511 aaKnown RBP23.35■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Arhgef12Q8R4H2 1543 aaKnown RBP23.35■■□□□ 1.33
Ckap4-202ENSMUST00000167671 PrkcshO08795 521 aa23.35■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Tcerg1Q8CGF7 1100 aaKnown RBP23.35■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Cdc42bpaQ3UU96 1719 aa23.34■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Arhgef11Q68FM7 1552 aa23.34■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Map3k4O08648 1597 aa23.33■■□□□ 1.33
Ckap4-202ENSMUST00000167671 Nup155Q99P88 1391 aaKnown RBP23.32■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Wdr7Q920I9 1489 aa23.31■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Setd1bQ8CFT2 1985 aa23.31■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Rpgrip1lQ8CG73 1264 aa23.3■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Ipo9Q91YE6 1041 aa23.3■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Mrc2Q64449 1479 aa23.3■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Tdrd9Q14BI7 1383 aa23.29■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Ccdc27Q3V036 639 aa23.29■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Erbb3Q61526 1339 aa23.28■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Rad21Q61550 635 aaKnown RBP23.28■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Arhgap31A6X8Z5 1425 aa23.27■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Map4P27546 1125 aaKnown RBP23.27■■□□□ 1.32
Ckap4-202ENSMUST00000167671 Fkbp15Q6P9Q6 1216 aaKnown RBP23.24■■□□□ 1.31
Ckap4-202ENSMUST00000167671 Kiaa1551Q5DTW7 1521 aa23.24■■□□□ 1.31
Ckap4-202ENSMUST00000167671 RalgapbQ8BQZ4 1484 aa23.22■■□□□ 1.31
Ckap4-202ENSMUST00000167671 Zfp444Q3TDV8 331 aaKnown RBP23.22■■□□□ 1.31
Ckap4-202ENSMUST00000167671 Q7TT23 1179 aa23.22■■□□□ 1.31
Ckap4-202ENSMUST00000167671 Shroom2A2ALU4 1481 aa23.21■■□□□ 1.31
Ckap4-202ENSMUST00000167671 NeflP08551 543 aa23.2■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Anp32bQ9EST5 272 aaKnown RBP23.19■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Kank1E9Q238 1360 aa23.19■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Zscan21Q07231 555 aa23.18■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Prex2Q3LAC4 1598 aa23.18■■□□□ 1.3
Ckap4-202ENSMUST00000167671 Magi1Q6RHR9 1471 aa23.18■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms