RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 A2mQ6GQT1 1474 aa19.14■□□□□ 0.66
Trim50-202ENSMUST00000111180 CntlnA2AM05 1397 aa19.13■□□□□ 0.65
Trim50-202ENSMUST00000111180 Ehmt2Q9Z148 1263 aaKnown RBP19.13■□□□□ 0.65
Trim50-202ENSMUST00000111180 Magi1Q6RHR9 1471 aa19.13■□□□□ 0.65
Trim50-202ENSMUST00000111180 Cyb5rlB1AS42 316 aa19.09■□□□□ 0.65
Trim50-202ENSMUST00000111180 Naip1Q9QWK5 1403 aa19.08■□□□□ 0.64
Trim50-202ENSMUST00000111180 Fam163aQ8CAA5 168 aa19.07■□□□□ 0.64
Trim50-202ENSMUST00000111180 Kdm6bQ5NCY0 1641 aa19.05■□□□□ 0.64
Trim50-202ENSMUST00000111180 Mlh3A0A1Y7VMP7 1443 aa19.03■□□□□ 0.64
Trim50-202ENSMUST00000111180 Prex2Q3LAC4 1598 aa19.03■□□□□ 0.64
Trim50-202ENSMUST00000111180 Ncoa3O09000 1398 aa19.02■□□□□ 0.64
Trim50-202ENSMUST00000111180 Dhx57Q6P5D3 1388 aaKnown RBP19■□□□□ 0.63
Trim50-202ENSMUST00000111180 Lmod2Q3UHZ5 550 aa18.99■□□□□ 0.63
Trim50-202ENSMUST00000111180 Brwd3A2AHJ4 1799 aa18.99■□□□□ 0.63
Trim50-202ENSMUST00000111180 Hecw2Q6I6G8 1578 aa18.98■□□□□ 0.63
Trim50-202ENSMUST00000111180 Naip2Q9QUK4 1447 aa18.97■□□□□ 0.63
Trim50-202ENSMUST00000111180 Abca9Q8K449 1623 aa18.96■□□□□ 0.63
Trim50-202ENSMUST00000111180 Gm1043A0A140LJC2 1431 aa18.96■□□□□ 0.63
Trim50-202ENSMUST00000111180 Mug1P28665 1476 aa18.96■□□□□ 0.63
Trim50-202ENSMUST00000111180 Qser1A2BIE1 1698 aa18.94■□□□□ 0.62
Trim50-202ENSMUST00000111180 Lemd3Q9WU40 921 aa18.94■□□□□ 0.62
Trim50-202ENSMUST00000111180 Synj2Q9D2G5 1434 aa18.93■□□□□ 0.62
Trim50-202ENSMUST00000111180 Kif14L0N7N1 1674 aaKnown RBP18.93■□□□□ 0.62
Trim50-202ENSMUST00000111180 Kiaa0556Q8C753 1610 aa18.91■□□□□ 0.62
Trim50-202ENSMUST00000111180 MyclP10166 368 aa18.9■□□□□ 0.62
Trim50-202ENSMUST00000111180 Safb2Q80YR5 991 aaKnown RBP18.9■□□□□ 0.62
Trim50-202ENSMUST00000111180 Fam208aQ69ZR9 1610 aaKnown RBP18.9■□□□□ 0.62
Trim50-202ENSMUST00000111180 Cdc42bpaQ3UU96 1719 aa18.87■□□□□ 0.61
Trim50-202ENSMUST00000111180 Arhgap5P97393 1501 aa18.86■□□□□ 0.61
Trim50-202ENSMUST00000111180 Lmtk2Q3TYD6 1471 aa18.84■□□□□ 0.61
Trim50-202ENSMUST00000111180 OvosQ3UU35 1456 aa18.83■□□□□ 0.6
Trim50-202ENSMUST00000111180 UbtfP25976 765 aaKnown RBP18.83■□□□□ 0.6
Trim50-202ENSMUST00000111180 NexmifQ5DTT1 1515 aa18.83■□□□□ 0.6
Trim50-202ENSMUST00000111180 Cul9Q80TT8 1865 aa18.82■□□□□ 0.6
Trim50-202ENSMUST00000111180 Kiaa1551Q5DTW7 1521 aa18.82■□□□□ 0.6
Trim50-202ENSMUST00000111180 Ercc6l2Q9JIM3 1537 aa18.81■□□□□ 0.6
Trim50-202ENSMUST00000111180 Ncapd3Q6ZQK0 1506 aa18.8■□□□□ 0.6
Trim50-202ENSMUST00000111180 Adamtsl3G3UXC7 1706 aa18.8■□□□□ 0.6
Trim50-202ENSMUST00000111180 Ptch1Q61115 1434 aa18.79■□□□□ 0.6
Trim50-202ENSMUST00000111180 Yeats2Q3TUF7 1407 aa18.77■□□□□ 0.6
Trim50-202ENSMUST00000111180 Acin1Q9JIX8 1338 aaKnown RBP18.77■□□□□ 0.59
Trim50-202ENSMUST00000111180 NpatQ8BMA5 1420 aa18.76■□□□□ 0.59
Trim50-202ENSMUST00000111180 Atp10aO54827 1508 aa18.75■□□□□ 0.59
Trim50-202ENSMUST00000111180 Tdrd9Q14BI7 1383 aa18.75■□□□□ 0.59
Trim50-202ENSMUST00000111180 Neurl4Q5NCX5 1563 aa18.75■□□□□ 0.59
Trim50-202ENSMUST00000111180 Kidins220E9Q9B7 1793 aa18.73■□□□□ 0.59
Trim50-202ENSMUST00000111180 Camsap2Q8C1B1 1461 aa18.72■□□□□ 0.59
Trim50-202ENSMUST00000111180 Trappc8E9PWG2 1437 aa18.72■□□□□ 0.59
Trim50-202ENSMUST00000111180 PtprmP28828 1452 aa18.71■□□□□ 0.59
Trim50-202ENSMUST00000111180 Ccnb3Q810T2 1396 aa18.71■□□□□ 0.59
Trim50-202ENSMUST00000111180 Dip2cE9PWR4 1557 aa18.7■□□□□ 0.58
Trim50-202ENSMUST00000111180 Sart1Q9Z315 806 aaKnown RBP18.7■□□□□ 0.58
Trim50-202ENSMUST00000111180 Kdm5cP41230 1554 aa18.69■□□□□ 0.58
Trim50-202ENSMUST00000111180 RereQ80TZ9 1558 aa18.68■□□□□ 0.58
Trim50-202ENSMUST00000111180 Zmym4A2A791 1549 aaKnown RBP18.67■□□□□ 0.58
Trim50-202ENSMUST00000111180 Supt6hQ62383 1726 aaKnown RBP18.64■□□□□ 0.58
Trim50-202ENSMUST00000111180 Rpgrip1Q9EPQ2 1331 aa18.64■□□□□ 0.57
Trim50-202ENSMUST00000111180 3425401B19RikD3Z1D3 1412 aa18.64■□□□□ 0.57
Trim50-202ENSMUST00000111180 Gm32742A0A1B0GT42 1604 aa18.64■□□□□ 0.57
Trim50-202ENSMUST00000111180 Adcy10Q8C0T9 1614 aa18.62■□□□□ 0.57
Trim50-202ENSMUST00000111180 Cdk11bP24788 784 aaKnown RBP18.6■□□□□ 0.57
Trim50-202ENSMUST00000111180 Afap1Q80YS6 731 aa18.6■□□□□ 0.57
Trim50-202ENSMUST00000111180 Mier1Q5UAK0 511 aa18.59■□□□□ 0.57
Trim50-202ENSMUST00000111180 Caskin1Q6P9K8 1431 aa18.59■□□□□ 0.57
Trim50-202ENSMUST00000111180 Pdcd11Q6NS46 1862 aaKnown RBP18.59■□□□□ 0.57
Trim50-202ENSMUST00000111180 Cfap74Q3UY96 1578 aa18.59■□□□□ 0.57
Trim50-202ENSMUST00000111180 Abcc3B2RX12 1523 aa18.57■□□□□ 0.56
Trim50-202ENSMUST00000111180 Cfap65Q3V0B4 1847 aa18.57■□□□□ 0.56
Trim50-202ENSMUST00000111180 SphkapQ6NSW3 1687 aa18.56■□□□□ 0.56
Trim50-202ENSMUST00000111180 Ahdc1Q6PAL7 1594 aaKnown RBP18.55■□□□□ 0.56
Trim50-202ENSMUST00000111180 Map3k5O35099 1380 aa18.55■□□□□ 0.56
Trim50-202ENSMUST00000111180 Dennd4bQ3U1Y4 1499 aa18.55■□□□□ 0.56
Trim50-202ENSMUST00000111180 Arhgef40Q3UPH7 1517 aa18.54■□□□□ 0.56
Trim50-202ENSMUST00000111180 Hecw1Q8K4P8 1604 aa18.54■□□□□ 0.56
Trim50-202ENSMUST00000111180 Mia2Q91ZV0 1396 aa18.52■□□□□ 0.55
Trim50-202ENSMUST00000111180 Plekhh2Q8C115 1491 aa18.51■□□□□ 0.55
Trim50-202ENSMUST00000111180 UacaQ8CGB3 1411 aa18.5■□□□□ 0.55
Trim50-202ENSMUST00000111180 Rrp7aQ9D1C9 280 aaKnown RBP18.5■□□□□ 0.55
Trim50-202ENSMUST00000111180 Cdc42bpbQ7TT50 1713 aa18.49■□□□□ 0.55
Trim50-202ENSMUST00000111180 Trpm1Q2TV84 1622 aa18.49■□□□□ 0.55
Trim50-202ENSMUST00000111180 Fhad1A6PWD2 1420 aa18.48■□□□□ 0.55
Trim50-202ENSMUST00000111180 Abca6Q8K441 1624 aa18.47■□□□□ 0.55
Trim50-202ENSMUST00000111180 Talpid3E9PV87 1520 aa18.47■□□□□ 0.55
Trim50-202ENSMUST00000111180 Rfx7F8VPJ6 1459 aa18.46■□□□□ 0.55
Trim50-202ENSMUST00000111180 Vps8Q0P5W1 1427 aa18.45■□□□□ 0.54
Trim50-202ENSMUST00000111180 Cdc42bpgQ80UW5 1551 aa18.45■□□□□ 0.54
Trim50-202ENSMUST00000111180 Scn4aQ9ER60 1841 aa18.45■□□□□ 0.54
Trim50-202ENSMUST00000111180 Abcc5Q9R1X5 1436 aa18.45■□□□□ 0.54
Trim50-202ENSMUST00000111180 Fam50aQ9WV03 339 aaKnown RBP18.44■□□□□ 0.54
Trim50-202ENSMUST00000111180 Mtus2Q3UHD3 1353 aa18.44■□□□□ 0.54
Trim50-202ENSMUST00000111180 Fbxo41Q6NS60 873 aa18.43■□□□□ 0.54
Trim50-202ENSMUST00000111180 Pip4k2bQ80XI4 416 aa18.43■□□□□ 0.54
Trim50-202ENSMUST00000111180 Myom2Q14BI5 1463 aa18.43■□□□□ 0.54
Trim50-202ENSMUST00000111180 Gm13697A2AK42 830 aa18.42■□□□□ 0.54
Trim50-202ENSMUST00000111180 Kif3bQ61771 747 aa18.41■□□□□ 0.54
Trim50-202ENSMUST00000111180 4930407I10RikD3Z5T8 1512 aa18.4■□□□□ 0.54
Trim50-202ENSMUST00000111180 Nos1Q9Z0J4 1429 aa18.39■□□□□ 0.53
Trim50-202ENSMUST00000111180 Topaz1E5FYH1 1653 aa18.39■□□□□ 0.53
Trim50-202ENSMUST00000111180 Dip2bQ3UH60 1574 aa18.39■□□□□ 0.53
Trim50-202ENSMUST00000111180 Prdm16A2A935 1275 aa18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms