RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Cux1P53564 1515 aa12.76□□□□□ -0.37
Trim9-201ENSMUST00000110520 Lamc3Q9R0B6 1581 aa12.75□□□□□ -0.37
Trim9-201ENSMUST00000110520 Nup155Q99P88 1391 aaKnown RBP12.75□□□□□ -0.37
Trim9-201ENSMUST00000110520 Smg6P61406 1418 aaKnown RBP12.75□□□□□ -0.37
Trim9-201ENSMUST00000110520 Gm13695A2AK44 830 aa12.74□□□□□ -0.37
Trim9-201ENSMUST00000110520 UacaQ8CGB3 1411 aa12.74□□□□□ -0.37
Trim9-201ENSMUST00000110520 Urb2E9Q7L1 1524 aaKnown RBP12.74□□□□□ -0.37
Trim9-201ENSMUST00000110520 Znf710Q3U288 666 aa12.73□□□□□ -0.37
Trim9-201ENSMUST00000110520 Pcf11G3X9Z4 1553 aa12.72□□□□□ -0.37
Trim9-201ENSMUST00000110520 Nolc1E9Q5C9 702 aaKnown RBP12.72□□□□□ -0.37
Trim9-201ENSMUST00000110520 DaxxO35613 739 aa12.71□□□□□ -0.37
Trim9-201ENSMUST00000110520 Srpk2O54781 681 aaKnown RBP12.71□□□□□ -0.37
Trim9-201ENSMUST00000110520 CadpsQ80TJ1 1355 aa12.71□□□□□ -0.37
Trim9-201ENSMUST00000110520 Cc2d2bA0A286YDU8 1405 aa12.71□□□□□ -0.38
Trim9-201ENSMUST00000110520 Gm7298A0A0N4SVU1 1476 aa12.7□□□□□ -0.38
Trim9-201ENSMUST00000110520 Vps8Q0P5W1 1427 aa12.7□□□□□ -0.38
Trim9-201ENSMUST00000110520 EprsQ8CGC7 1512 aaKnown RBP12.69□□□□□ -0.38
Trim9-201ENSMUST00000110520 Dbr1Q923B1 550 aa12.69□□□□□ -0.38
Trim9-201ENSMUST00000110520 Plb1Q3TTY0 1478 aa12.68□□□□□ -0.38
Trim9-201ENSMUST00000110520 Rtl5Q5DTT4 599 aa12.68□□□□□ -0.38
Trim9-201ENSMUST00000110520 Hdac5Q9Z2V6 1113 aa12.68□□□□□ -0.38
Trim9-201ENSMUST00000110520 3425401B19RikD3Z1D3 1412 aa12.68□□□□□ -0.38
Trim9-201ENSMUST00000110520 Jph4Q80WT0 628 aa12.68□□□□□ -0.38
Trim9-201ENSMUST00000110520 Slx4Q6P1D7 1565 aa12.67□□□□□ -0.38
Trim9-201ENSMUST00000110520 Kif3bQ61771 747 aa12.67□□□□□ -0.38
Trim9-201ENSMUST00000110520 Ankrd36D3Z4K0 1415 aa12.66□□□□□ -0.38
Trim9-201ENSMUST00000110520 B4galnt3Q6L8S8 986 aa12.66□□□□□ -0.38
Trim9-201ENSMUST00000110520 Dhx9O70133 1380 aaKnown RBP12.66□□□□□ -0.38
Trim9-201ENSMUST00000110520 Ankrd26Q811D2 1581 aa12.65□□□□□ -0.38
Trim9-201ENSMUST00000110520 Dapk1Q80YE7 1442 aa12.64□□□□□ -0.39
Trim9-201ENSMUST00000110520 Upf2A2AT37 1269 aaKnown RBP12.64□□□□□ -0.39
Trim9-201ENSMUST00000110520 Supt16hQ920B9 1047 aa12.64□□□□□ -0.39
Trim9-201ENSMUST00000110520 Arhgap31A6X8Z5 1425 aa12.63□□□□□ -0.39
Trim9-201ENSMUST00000110520 A2mQ6GQT1 1474 aa12.63□□□□□ -0.39
Trim9-201ENSMUST00000110520 Slc4a2P13808 1237 aaKnown RBP12.63□□□□□ -0.39
Trim9-201ENSMUST00000110520 Ttll5Q8CHB8 1328 aa12.63□□□□□ -0.39
Trim9-201ENSMUST00000110520 Slc4a1apE9PX68 744 aa12.63□□□□□ -0.39
Trim9-201ENSMUST00000110520 Zscan21Q07231 555 aa12.63□□□□□ -0.39
Trim9-201ENSMUST00000110520 Naip2Q9QUK4 1447 aa12.62□□□□□ -0.39
Trim9-201ENSMUST00000110520 Ift140E9PY46 1464 aa12.62□□□□□ -0.39
Trim9-201ENSMUST00000110520 Inpp5dQ9ES52 1191 aa12.62□□□□□ -0.39
Trim9-201ENSMUST00000110520 Stag3O70576 1240 aa12.61□□□□□ -0.39
Trim9-201ENSMUST00000110520 Pank3Q8R2W9 370 aa12.61□□□□□ -0.39
Trim9-201ENSMUST00000110520 CrbnQ8C7D2 445 aa12.61□□□□□ -0.39
Trim9-201ENSMUST00000110520 Stk26Q99JT2 416 aa12.61□□□□□ -0.39
Trim9-201ENSMUST00000110520 Dhx57Q6P5D3 1388 aaKnown RBP12.6□□□□□ -0.39
Trim9-201ENSMUST00000110520 Mrc2Q64449 1479 aa12.6□□□□□ -0.39
Trim9-201ENSMUST00000110520 Polr1aO35134 1717 aaKnown RBP12.6□□□□□ -0.39
Trim9-201ENSMUST00000110520 Srcin1Q9QWI6 1250 aa12.6□□□□□ -0.39
Trim9-201ENSMUST00000110520 Fan1Q69ZT1 1020 aa12.59□□□□□ -0.39
Trim9-201ENSMUST00000110520 Armcx1Q9CX83 456 aa12.59□□□□□ -0.39
Trim9-201ENSMUST00000110520 SynmQ70IV5 1561 aa12.59□□□□□ -0.39
Trim9-201ENSMUST00000110520 Exosc9Q9JHI7 438 aaKnown RBP12.59□□□□□ -0.39
Trim9-201ENSMUST00000110520 Lemd3Q9WU40 921 aa12.59□□□□□ -0.39
Trim9-201ENSMUST00000110520 Dcaf11Q91VU6 549 aa12.59□□□□□ -0.39
Trim9-201ENSMUST00000110520 TnnQ80Z71 1560 aa12.58□□□□□ -0.4
Trim9-201ENSMUST00000110520 Rock2P70336 1388 aa12.57□□□□□ -0.4
Trim9-201ENSMUST00000110520 Trim30dE9PWL0 497 aa12.57□□□□□ -0.4
Trim9-201ENSMUST00000110520 Speer4f1Q9D5Q6 258 aa12.57□□□□□ -0.4
Trim9-201ENSMUST00000110520 Mak16Q8BGS0 296 aaKnown RBP12.57□□□□□ -0.4
Trim9-201ENSMUST00000110520 Rpgrip1lQ8CG73 1264 aa12.56□□□□□ -0.4
Trim9-201ENSMUST00000110520 Senp3Q9EP97 568 aaKnown RBP12.56□□□□□ -0.4
Trim9-201ENSMUST00000110520 Gtf2e1Q9D0D5 440 aa12.56□□□□□ -0.4
Trim9-201ENSMUST00000110520 NexmifQ5DTT1 1515 aa12.56□□□□□ -0.4
Trim9-201ENSMUST00000110520 Spag9Q58A65 1321 aaKnown RBP12.56□□□□□ -0.4
Trim9-201ENSMUST00000110520 IqubQ8CDK3 788 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 Esx1O88933 382 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 TchhA0A0B4J1F9 1599 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 Tmf1B9EKI3 1091 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 Q7TT23 1179 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 Map3k5O35099 1380 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 Gm1043A0A140LJC2 1431 aa12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 CanxP35564 591 aaKnown RBP12.55□□□□□ -0.4
Trim9-201ENSMUST00000110520 Abcc5Q9R1X5 1436 aa12.54□□□□□ -0.4
Trim9-201ENSMUST00000110520 Soga1E1U8D0 1418 aa12.54□□□□□ -0.4
Trim9-201ENSMUST00000110520 Crocc2F6XLV1 1638 aa12.53□□□□□ -0.4
Trim9-201ENSMUST00000110520 Grin2aP35436 1464 aa12.53□□□□□ -0.4
Trim9-201ENSMUST00000110520 Mug1P28665 1476 aa12.52□□□□□ -0.41
Trim9-201ENSMUST00000110520 4930567H17RikQ3V0K5 233 aa12.52□□□□□ -0.41
Trim9-201ENSMUST00000110520 Gpatch8A2A6A1 1505 aa12.52□□□□□ -0.41
Trim9-201ENSMUST00000110520 Kcnh8P59111 1102 aa12.51□□□□□ -0.41
Trim9-201ENSMUST00000110520 Plin1Q8CGN5 517 aa12.51□□□□□ -0.41
Trim9-201ENSMUST00000110520 Pde4cQ3UEI1 686 aa12.5□□□□□ -0.41
Trim9-201ENSMUST00000110520 NgefQ8CHT1 710 aa12.5□□□□□ -0.41
Trim9-201ENSMUST00000110520 DiexfQ8BTT6 772 aaKnown RBP12.5□□□□□ -0.41
Trim9-201ENSMUST00000110520 Samd9lQ69Z37 1561 aa12.49□□□□□ -0.41
Trim9-201ENSMUST00000110520 Arid4bA2CG63 1314 aaKnown RBP12.48□□□□□ -0.41
Trim9-201ENSMUST00000110520 Safb2Q80YR5 991 aaKnown RBP12.48□□□□□ -0.41
Trim9-201ENSMUST00000110520 Tcerg1Q8CGF7 1100 aaKnown RBP12.48□□□□□ -0.41
Trim9-201ENSMUST00000110520 Znf316Q6PGE4 1016 aa12.48□□□□□ -0.41
Trim9-201ENSMUST00000110520 Rwdd1Q9CQK7 243 aa12.48□□□□□ -0.41
Trim9-201ENSMUST00000110520 Irx6Q9ER75 438 aa12.48□□□□□ -0.41
Trim9-201ENSMUST00000110520 Ncoa3O09000 1398 aa12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 Ncoa2Q61026 1462 aa12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 Thoc2B1AZI6 1594 aaKnown RBP12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 PnisrA2AJT4 805 aaKnown RBP12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 Naip5Q9R016 1403 aa12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 Gm6268A2A3U9 297 aa12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 Ppp1r18Q8BQ30 594 aa12.47□□□□□ -0.41
Trim9-201ENSMUST00000110520 Usp40Q8BWR4 1235 aa12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 97.9 ms