RNA–Protein interactions for RNA: ENSMUST00000109468.2

Top1-201, Transcript of DNA topoisomerase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Top1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Top1-201ENSMUST00000109468 Nlrp6Q91WS2 869 aa13.83□□□□□ -0.2
Top1-201ENSMUST00000109468 TnnQ80Z71 1560 aa13.83□□□□□ -0.2
Top1-201ENSMUST00000109468 WrnO09053 1401 aa13.82□□□□□ -0.2
Top1-201ENSMUST00000109468 ArxO35085 564 aa13.82□□□□□ -0.2
Top1-201ENSMUST00000109468 Apbb1Q9QXJ1 710 aa13.82□□□□□ -0.2
Top1-201ENSMUST00000109468 A2mQ6GQT1 1474 aa13.81□□□□□ -0.2
Top1-201ENSMUST00000109468 Plekhh2Q8C115 1491 aa13.81□□□□□ -0.2
Top1-201ENSMUST00000109468 Polr3glQ8R0C0 218 aa13.8□□□□□ -0.2
Top1-201ENSMUST00000109468 Clstn2Q9ER65 966 aa13.79□□□□□ -0.2
Top1-201ENSMUST00000109468 Pak3Q61036 559 aa13.79□□□□□ -0.2
Top1-201ENSMUST00000109468 Kdm5bQ80Y84 1544 aa13.77□□□□□ -0.2
Top1-201ENSMUST00000109468 Mroh3A0A1D5RM54 893 aa13.77□□□□□ -0.2
Top1-201ENSMUST00000109468 Upf2A2AT37 1269 aaKnown RBP13.77□□□□□ -0.21
Top1-201ENSMUST00000109468 Dbr1Q923B1 550 aa13.77□□□□□ -0.21
Top1-201ENSMUST00000109468 B4galnt3Q6L8S8 986 aa13.76□□□□□ -0.21
Top1-201ENSMUST00000109468 Kcnh8P59111 1102 aa13.76□□□□□ -0.21
Top1-201ENSMUST00000109468 Dapk1Q80YE7 1442 aa13.75□□□□□ -0.21
Top1-201ENSMUST00000109468 Ifit1bl1D3Z6F0 470 aa13.75□□□□□ -0.21
Top1-201ENSMUST00000109468 Naip5Q9R016 1403 aa13.75□□□□□ -0.21
Top1-201ENSMUST00000109468 CadpsQ80TJ1 1355 aa13.74□□□□□ -0.21
Top1-201ENSMUST00000109468 Tcerg1Q8CGF7 1100 aaKnown RBP13.74□□□□□ -0.21
Top1-201ENSMUST00000109468 Rangap1P46061 589 aaKnown RBP13.74□□□□□ -0.21
Top1-201ENSMUST00000109468 Neurod2Q62414 383 aa13.74□□□□□ -0.21
Top1-201ENSMUST00000109468 Nup155Q99P88 1391 aaKnown RBP13.74□□□□□ -0.21
Top1-201ENSMUST00000109468 Gm1043A0A140LJC2 1431 aa13.73□□□□□ -0.21
Top1-201ENSMUST00000109468 PnisrA2AJT4 805 aaKnown RBP13.73□□□□□ -0.21
Top1-201ENSMUST00000109468 Zscan21Q07231 555 aa13.73□□□□□ -0.21
Top1-201ENSMUST00000109468 Dhx9O70133 1380 aaKnown RBP13.73□□□□□ -0.21
Top1-201ENSMUST00000109468 Ift140E9PY46 1464 aa13.72□□□□□ -0.21
Top1-201ENSMUST00000109468 Washc2Q6PGL7 1334 aa13.72□□□□□ -0.21
Top1-201ENSMUST00000109468 EprsQ8CGC7 1512 aaKnown RBP13.72□□□□□ -0.21
Top1-201ENSMUST00000109468 Tdrd9Q14BI7 1383 aa13.72□□□□□ -0.21
Top1-201ENSMUST00000109468 Urb2E9Q7L1 1524 aaKnown RBP13.7□□□□□ -0.22
Top1-201ENSMUST00000109468 CanxP35564 591 aaKnown RBP13.69□□□□□ -0.22
Top1-201ENSMUST00000109468 Ccdc27Q3V036 639 aa13.69□□□□□ -0.22
Top1-201ENSMUST00000109468 Ttll5Q8CHB8 1328 aa13.69□□□□□ -0.22
Top1-201ENSMUST00000109468 Polr1aO35134 1717 aaKnown RBP13.69□□□□□ -0.22
Top1-201ENSMUST00000109468 Ncoa2Q61026 1462 aa13.69□□□□□ -0.22
Top1-201ENSMUST00000109468 Mak16Q8BGS0 296 aaKnown RBP13.68□□□□□ -0.22
Top1-201ENSMUST00000109468 Rpgrip1lQ8CG73 1264 aa13.68□□□□□ -0.22
Top1-201ENSMUST00000109468 Trim26Q99PN3 545 aa13.68□□□□□ -0.22
Top1-201ENSMUST00000109468 Cc2d2bA0A286YDU8 1405 aa13.67□□□□□ -0.22
Top1-201ENSMUST00000109468 SynmQ70IV5 1561 aa13.66□□□□□ -0.22
Top1-201ENSMUST00000109468 Atp1b4Q99ME6 356 aa13.66□□□□□ -0.22
Top1-201ENSMUST00000109468 CrbnQ8C7D2 445 aa13.65□□□□□ -0.22
Top1-201ENSMUST00000109468 Pank3Q8R2W9 370 aa13.65□□□□□ -0.22
Top1-201ENSMUST00000109468 ChgaP26339 463 aaKnown RBP13.65□□□□□ -0.22
Top1-201ENSMUST00000109468 Q7TT23 1179 aa13.65□□□□□ -0.22
Top1-201ENSMUST00000109468 Inpp5dQ9ES52 1191 aa13.65□□□□□ -0.22
Top1-201ENSMUST00000109468 Hsp90aa1P07901 733 aaKnown RBP13.65□□□□□ -0.23
Top1-201ENSMUST00000109468 Abcc5Q9R1X5 1436 aa13.64□□□□□ -0.23
Top1-201ENSMUST00000109468 NexmifQ5DTT1 1515 aa13.64□□□□□ -0.23
Top1-201ENSMUST00000109468 Gm20521D3Z5F7 333 aa13.64□□□□□ -0.23
Top1-201ENSMUST00000109468 Stk24Q99KH8 431 aa13.64□□□□□ -0.23
Top1-201ENSMUST00000109468 Cnga1P29974 684 aa13.64□□□□□ -0.23
Top1-201ENSMUST00000109468 Trim30dE9PWL0 497 aa13.63□□□□□ -0.23
Top1-201ENSMUST00000109468 L3mbtl2P59178 703 aa13.63□□□□□ -0.23
Top1-201ENSMUST00000109468 Sart1Q9Z315 806 aaKnown RBP13.63□□□□□ -0.23
Top1-201ENSMUST00000109468 Esx1O88933 382 aa13.62□□□□□ -0.23
Top1-201ENSMUST00000109468 AknaQ80VW7 1404 aa13.62□□□□□ -0.23
Top1-201ENSMUST00000109468 Ipo9Q91YE6 1041 aa13.62□□□□□ -0.23
Top1-201ENSMUST00000109468 Gpatch8A2A6A1 1505 aa13.61□□□□□ -0.23
Top1-201ENSMUST00000109468 Slc4a1apE9PX68 744 aa13.61□□□□□ -0.23
Top1-201ENSMUST00000109468 Erich3F6QRE9 1637 aa13.6□□□□□ -0.23
Top1-201ENSMUST00000109468 Ncoa1P70365 1447 aa13.6□□□□□ -0.23
Top1-201ENSMUST00000109468 Speer4f1Q9D5Q6 258 aa13.59□□□□□ -0.23
Top1-201ENSMUST00000109468 Plb1Q3TTY0 1478 aa13.59□□□□□ -0.23
Top1-201ENSMUST00000109468 Armcx1Q9CX83 456 aa13.58□□□□□ -0.24
Top1-201ENSMUST00000109468 4930567H17RikQ3V0K5 233 aa13.58□□□□□ -0.24
Top1-201ENSMUST00000109468 Hdac5Q9Z2V6 1113 aa13.58□□□□□ -0.24
Top1-201ENSMUST00000109468 Rock2P70336 1388 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Rwdd1Q9CQK7 243 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Samd9lQ69Z37 1561 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Plekhg5Q66T02 1073 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Arhgap31A6X8Z5 1425 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Mug1P28665 1476 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Tmf1B9EKI3 1091 aa13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Srpk2O54781 681 aaKnown RBP13.57□□□□□ -0.24
Top1-201ENSMUST00000109468 Zfp444Q3TDV8 331 aaKnown RBP13.56□□□□□ -0.24
Top1-201ENSMUST00000109468 Ecm2Q5FW85 670 aa13.56□□□□□ -0.24
Top1-201ENSMUST00000109468 Chmp5Q9D7S9 219 aa13.56□□□□□ -0.24
Top1-201ENSMUST00000109468 Srcin1Q9QWI6 1250 aa13.56□□□□□ -0.24
Top1-201ENSMUST00000109468 Dhx57Q6P5D3 1388 aaKnown RBP13.56□□□□□ -0.24
Top1-201ENSMUST00000109468 Thoc2B1AZI6 1594 aaKnown RBP13.56□□□□□ -0.24
Top1-201ENSMUST00000109468 Liat1Q810M6 228 aa13.55□□□□□ -0.24
Top1-201ENSMUST00000109468 BC005561E9Q5E2 1589 aa13.54□□□□□ -0.24
Top1-201ENSMUST00000109468 Rprd2Q6NXI6 1469 aaKnown RBP13.54□□□□□ -0.24
Top1-201ENSMUST00000109468 Lmo7E9PYF4 1699 aaKnown RBP13.54□□□□□ -0.24
Top1-201ENSMUST00000109468 Ncoa3O09000 1398 aa13.54□□□□□ -0.24
Top1-201ENSMUST00000109468 Jph4Q80WT0 628 aa13.54□□□□□ -0.24
Top1-201ENSMUST00000109468 Dcaf11Q91VU6 549 aa13.53□□□□□ -0.24
Top1-201ENSMUST00000109468 Hsp90ab1P11499 724 aaKnown RBP13.52□□□□□ -0.24
Top1-201ENSMUST00000109468 Grin2aP35436 1464 aa13.52□□□□□ -0.25
Top1-201ENSMUST00000109468 Zscan10Q3URR7 782 aa13.51□□□□□ -0.25
Top1-201ENSMUST00000109468 Il16O54824 1322 aa13.51□□□□□ -0.25
Top1-201ENSMUST00000109468 Crocc2F6XLV1 1638 aa13.51□□□□□ -0.25
Top1-201ENSMUST00000109468 Arid3cA6PWV5 409 aa13.51□□□□□ -0.25
Top1-201ENSMUST00000109468 PrkcshO08795 521 aa13.5□□□□□ -0.25
Top1-201ENSMUST00000109468 Dnajc5bQ9CQ94 199 aa13.48□□□□□ -0.25
Top1-201ENSMUST00000109468 Gtf2e1Q9D0D5 440 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms