RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Rapgef6Q5NCJ1 1609 aa16.29■□□□□ 0.2
Trim11-202ENSMUST00000108809 Kdm6bQ5NCY0 1641 aa16.28■□□□□ 0.2
Trim11-202ENSMUST00000108809 Arhgef40Q3UPH7 1517 aa16.28■□□□□ 0.2
Trim11-202ENSMUST00000108809 Cdc42bpaQ3UU96 1719 aa16.28■□□□□ 0.2
Trim11-202ENSMUST00000108809 Ncoa3O09000 1398 aa16.27■□□□□ 0.2
Trim11-202ENSMUST00000108809 Rprd2Q6NXI6 1469 aaKnown RBP16.27■□□□□ 0.2
Trim11-202ENSMUST00000108809 SphkapQ6NSW3 1687 aa16.26■□□□□ 0.19
Trim11-202ENSMUST00000108809 Arhgef11Q68FM7 1552 aa16.25■□□□□ 0.19
Trim11-202ENSMUST00000108809 Nup160Q9Z0W3 1402 aaKnown RBP16.24■□□□□ 0.19
Trim11-202ENSMUST00000108809 Ncoa1P70365 1447 aa16.23■□□□□ 0.19
Trim11-202ENSMUST00000108809 Plekhh2Q8C115 1491 aa16.23■□□□□ 0.19
Trim11-202ENSMUST00000108809 Kiaa1551Q5DTW7 1521 aa16.22■□□□□ 0.19
Trim11-202ENSMUST00000108809 Adcy10Q8C0T9 1614 aa16.22■□□□□ 0.19
Trim11-202ENSMUST00000108809 Ube2uB1AUC4 352 aa16.22■□□□□ 0.19
Trim11-202ENSMUST00000108809 Cabp1Q9JLK7 227 aa16.22■□□□□ 0.19
Trim11-202ENSMUST00000108809 Kdm3bQ6ZPY7 1562 aa16.22■□□□□ 0.19
Trim11-202ENSMUST00000108809 WrnO09053 1401 aa16.21■□□□□ 0.19
Trim11-202ENSMUST00000108809 Abcc2Q8VI47 1543 aa16.21■□□□□ 0.19
Trim11-202ENSMUST00000108809 Usp47Q8BY87 1376 aa16.2■□□□□ 0.18
Trim11-202ENSMUST00000108809 Pik3c2gO70167 1506 aa16.2■□□□□ 0.18
Trim11-202ENSMUST00000108809 AlkP97793 1621 aa16.18■□□□□ 0.18
Trim11-202ENSMUST00000108809 Zfp644E9QA22 1323 aa16.17■□□□□ 0.18
Trim11-202ENSMUST00000108809 Shroom2A2ALU4 1481 aa16.16■□□□□ 0.18
Trim11-202ENSMUST00000108809 Il16O54824 1322 aa16.16■□□□□ 0.18
Trim11-202ENSMUST00000108809 Pkd2O35245 966 aa16.16■□□□□ 0.18
Trim11-202ENSMUST00000108809 Adgrb2Q8CGM1 1561 aa16.15■□□□□ 0.18
Trim11-202ENSMUST00000108809 Mbd5B1AYB6 1498 aa16.13■□□□□ 0.17
Trim11-202ENSMUST00000108809 Arhgef12Q8R4H2 1543 aaKnown RBP16.13■□□□□ 0.17
Trim11-202ENSMUST00000108809 Kif14L0N7N1 1674 aaKnown RBP16.12■□□□□ 0.17
Trim11-202ENSMUST00000108809 Fam71e1A1L3C1 212 aa16.11■□□□□ 0.17
Trim11-202ENSMUST00000108809 Mtus2Q3UHD3 1353 aa16.11■□□□□ 0.17
Trim11-202ENSMUST00000108809 Supt6hQ62383 1726 aaKnown RBP16.11■□□□□ 0.17
Trim11-202ENSMUST00000108809 DiexfQ8BTT6 772 aaKnown RBP16.11■□□□□ 0.17
Trim11-202ENSMUST00000108809 Map3k4O08648 1597 aa16.1■□□□□ 0.17
Trim11-202ENSMUST00000108809 Mroh2aD3Z750 1679 aa16.1■□□□□ 0.17
Trim11-202ENSMUST00000108809 Mapkbp1Q6NS57 1503 aa16.09■□□□□ 0.17
Trim11-202ENSMUST00000108809 Zcchc11B2RX14 1644 aaKnown RBP16.09■□□□□ 0.17
Trim11-202ENSMUST00000108809 Trpm2Q91YD4 1506 aa16.08■□□□□ 0.17
Trim11-202ENSMUST00000108809 Calr4Q3TQS0 420 aa16.07■□□□□ 0.16
Trim11-202ENSMUST00000108809 Gm13695A2AK44 830 aa16.06■□□□□ 0.16
Trim11-202ENSMUST00000108809 Cc2d2bA0A286YDU8 1405 aa16.06■□□□□ 0.16
Trim11-202ENSMUST00000108809 Arhgap31A6X8Z5 1425 aa16.05■□□□□ 0.16
Trim11-202ENSMUST00000108809 Magi1Q6RHR9 1471 aa16.05■□□□□ 0.16
Trim11-202ENSMUST00000108809 Anp32aO35381 247 aa16.04■□□□□ 0.16
Trim11-202ENSMUST00000108809 Dhx57Q6P5D3 1388 aaKnown RBP16.04■□□□□ 0.16
Trim11-202ENSMUST00000108809 Arhgap27A2AB59 869 aa16.03■□□□□ 0.16
Trim11-202ENSMUST00000108809 Lrriq1Q0P5X1 1673 aa16.03■□□□□ 0.16
Trim11-202ENSMUST00000108809 Prex2Q3LAC4 1598 aa16.03■□□□□ 0.16
Trim11-202ENSMUST00000108809 Bcl11aQ9QYE3 773 aa16.03■□□□□ 0.16
Trim11-202ENSMUST00000108809 Slc4a2P13808 1237 aaKnown RBP16.02■□□□□ 0.16
Trim11-202ENSMUST00000108809 Dhx9O70133 1380 aaKnown RBP16.02■□□□□ 0.15
Trim11-202ENSMUST00000108809 Washc2Q6PGL7 1334 aa16.02■□□□□ 0.15
Trim11-202ENSMUST00000108809 Ccdc141E9Q8Q6 1531 aa16.01■□□□□ 0.15
Trim11-202ENSMUST00000108809 Mug2P28666 1451 aa16.01■□□□□ 0.15
Trim11-202ENSMUST00000108809 Mlh3A0A1Y7VMP7 1443 aa16■□□□□ 0.15
Trim11-202ENSMUST00000108809 Fam163aQ8CAA5 168 aa16■□□□□ 0.15
Trim11-202ENSMUST00000108809 Naip6Q9JIB6 1403 aa16■□□□□ 0.15
Trim11-202ENSMUST00000108809 DroshaQ5HZJ0 1373 aaKnown RBP16■□□□□ 0.15
Trim11-202ENSMUST00000108809 Ttll5Q8CHB8 1328 aa15.99■□□□□ 0.15
Trim11-202ENSMUST00000108809 Plekhg5Q66T02 1073 aa15.98■□□□□ 0.15
Trim11-202ENSMUST00000108809 Mrs2Q5NCE8 434 aa15.98■□□□□ 0.15
Trim11-202ENSMUST00000108809 Wdr7Q920I9 1489 aa15.98■□□□□ 0.15
Trim11-202ENSMUST00000108809 Caskin1Q6P9K8 1431 aa15.98■□□□□ 0.15
Trim11-202ENSMUST00000108809 Dnmt1P13864 1620 aaKnown RBP15.97■□□□□ 0.15
Trim11-202ENSMUST00000108809 Dapk1Q80YE7 1442 aa15.97■□□□□ 0.15
Trim11-202ENSMUST00000108809 Fmn2Q9JL04 1578 aa15.97■□□□□ 0.15
Trim11-202ENSMUST00000108809 PnisrA2AJT4 805 aaKnown RBP15.97■□□□□ 0.15
Trim11-202ENSMUST00000108809 Slc24a1Q91WD8 1130 aa15.96■□□□□ 0.15
Trim11-202ENSMUST00000108809 Exoc6Q8R313 802 aa15.95■□□□□ 0.14
Trim11-202ENSMUST00000108809 Nolc1E9Q5C9 702 aaKnown RBP15.95■□□□□ 0.14
Trim11-202ENSMUST00000108809 Myom3A2ABU4 1439 aa15.95■□□□□ 0.14
Trim11-202ENSMUST00000108809 Wwc2Q6NXJ0 1187 aa15.94■□□□□ 0.14
Trim11-202ENSMUST00000108809 Cwc22Q8C5N3 908 aaKnown RBP15.94■□□□□ 0.14
Trim11-202ENSMUST00000108809 Fam208aQ69ZR9 1610 aaKnown RBP15.94■□□□□ 0.14
Trim11-202ENSMUST00000108809 Iqgap1Q9JKF1 1657 aaKnown RBP15.93■□□□□ 0.14
Trim11-202ENSMUST00000108809 Cdk13Q69ZA1 1511 aaKnown RBP15.92■□□□□ 0.14
Trim11-202ENSMUST00000108809 Rusc2Q80U22 1514 aa15.92■□□□□ 0.14
Trim11-202ENSMUST00000108809 Tdrd9Q14BI7 1383 aa15.91■□□□□ 0.14
Trim11-202ENSMUST00000108809 RalgapbQ8BQZ4 1484 aa15.91■□□□□ 0.14
Trim11-202ENSMUST00000108809 Dot1lQ6XZL8 1540 aa15.91■□□□□ 0.14
Trim11-202ENSMUST00000108809 Rrbp1Q99PL5 1605 aaKnown RBP15.91■□□□□ 0.14
Trim11-202ENSMUST00000108809 Cpsf1Q9EPU4 1441 aaKnown RBP15.9■□□□□ 0.14
Trim11-202ENSMUST00000108809 Nup155Q99P88 1391 aaKnown RBP15.89■□□□□ 0.13
Trim11-202ENSMUST00000108809 Rgl3Q3UYI5 709 aa15.89■□□□□ 0.13
Trim11-202ENSMUST00000108809 Trak1Q6PD31 939 aa15.89■□□□□ 0.13
Trim11-202ENSMUST00000108809 Adgrl2Q8JZZ7 1487 aa15.89■□□□□ 0.13
Trim11-202ENSMUST00000108809 Rundc1Q0VDN7 615 aa15.88■□□□□ 0.13
Trim11-202ENSMUST00000108809 Lrrc9Q8CDN9 1456 aa15.87■□□□□ 0.13
Trim11-202ENSMUST00000108809 Asxl1P59598 1514 aa15.86■□□□□ 0.13
Trim11-202ENSMUST00000108809 PtprgQ05909 1442 aa15.86■□□□□ 0.13
Trim11-202ENSMUST00000108809 Gm32742A0A1B0GT42 1604 aa15.86■□□□□ 0.13
Trim11-202ENSMUST00000108809 Fancd2Q80V62 1450 aa15.85■□□□□ 0.13
Trim11-202ENSMUST00000108809 Tubgcp6G5E8P0 1769 aa15.85■□□□□ 0.13
Trim11-202ENSMUST00000108809 Mast1Q9R1L5 1570 aa15.85■□□□□ 0.13
Trim11-202ENSMUST00000108809 NrdcQ8BHG1 1161 aa15.84■□□□□ 0.13
Trim11-202ENSMUST00000108809 Neo1P97798 1493 aa15.84■□□□□ 0.13
Trim11-202ENSMUST00000108809 Polr3aB2RXC6 1390 aa15.83■□□□□ 0.12
Trim11-202ENSMUST00000108809 Card11Q8CIS0 1159 aa15.82■□□□□ 0.12
Trim11-202ENSMUST00000108809 Rock1P70335 1354 aa15.82■□□□□ 0.12
Trim11-202ENSMUST00000108809 Gapvd1Q6PAR5 1458 aa15.82■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms