RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Casc1Q6TDU8 730 aa11.51□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Kif27Q7M6Z4 1394 aa11.51□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 SafbD3YXK2 937 aaKnown RBP11.51□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Sh3bp5Q9Z131 463 aa11.51□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Map4P27546 1125 aaKnown RBP11.5□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Txndc2Q6P902 515 aa11.5□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Pabpn1Q8CCS6 302 aaKnown RBP11.5□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Hsp90b1P08113 802 aaKnown RBP11.5□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Rsph4aQ8BYM7 716 aa11.5□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Spryd3E9Q9B3 442 aa11.49□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Nol10Q5RJG1 687 aaKnown RBP11.48□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Fam135aQ6NS59 1506 aa11.47□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 LrpprcQ6PB66 1392 aaKnown RBP11.46□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Sox12Q04890 314 aa11.46□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Gtf2e1Q9D0D5 440 aa11.46□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Wdr62Q3U3T8 1523 aa11.46□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Plin1Q8CGN5 517 aa11.45□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 U2surpQ6NV83 1029 aaKnown RBP11.45□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Fhad1A6PWD2 1420 aa11.45□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Armcx1Q9CX83 456 aa11.45□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Rpap1Q80TE0 1409 aa11.44□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 MccE9PWI3 1003 aa11.44□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 HnrnpuQ8VEK3 800 aaKnown RBP11.44□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Mbd3Q9Z2D8 285 aaKnown RBP11.43□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Rassf8Q8CJ96 419 aa11.43□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 KnstrnQ9D9Z1 312 aaKnown RBP11.43□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Ifit1bl1D3Z6F0 470 aa11.42□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Dbr1Q923B1 550 aa11.42□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Sart3Q9JLI8 962 aaKnown RBP11.42□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Dnai2A2AC93 623 aa11.42□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Birc3O08863 600 aa11.41□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Anapc15P60007 132 aa11.4□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Q3TQI7 289 aaKnown RBP11.4□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Gm973E9Q295 1059 aa11.4□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Frmpd1A2AKB4 1549 aa11.4□□□□□ -0.58
Snrnp200-201ENSMUST00000103220 Ppm1fQ8CGA0 452 aa11.4□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Ift140E9PY46 1464 aa11.39□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Pde3bQ61409 1100 aa11.39□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Wwc2Q6NXJ0 1187 aa11.39□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Slc4a3P16283 1227 aa11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Rundc1Q0VDN7 615 aa11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Tnnt1O88346 262 aa11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Aebp1Q640N1 1128 aa11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Pkd2O35245 966 aa11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 PtmsQ9D0J8 101 aaKnown RBP11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Tmf1B9EKI3 1091 aa11.38□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Dhx29Q6PGC1 1365 aaKnown RBP11.37□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Spag9Q58A65 1321 aaKnown RBP11.37□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Calcoco2A2A6M5 331 aa11.37□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Znf316Q6PGE4 1016 aa11.37□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Rwdd1Q9CQK7 243 aa11.37□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Efcab5A0JP43 1406 aa11.37□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Kif3bQ61771 747 aa11.36□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Cc2d2aQ8CFW7 1633 aa11.36□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Cc2d2bA0A286YDU8 1405 aa11.36□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 U2af1Q9D883 239 aaKnown RBP11.36□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Trak1Q6PD31 939 aa11.35□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Ecm2Q5FW85 670 aa11.35□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Cecr2E9Q2Z1 1453 aa11.35□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Tnnt2P50752 301 aa11.35□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Dhx57Q6P5D3 1388 aaKnown RBP11.34□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Taok2Q6ZQ29 1240 aa11.34□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Ap3b2Q9JME5 1082 aa11.34□□□□□ -0.59
Snrnp200-201ENSMUST00000103220 Speer4f1Q9D5Q6 258 aa11.33□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Hspa5P20029 655 aaKnown RBP11.33□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Pak3Q61036 559 aa11.33□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 B4galnt3Q6L8S8 986 aa11.33□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Thoc2B1AZI6 1594 aaKnown RBP11.33□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Ubap1lG3UW59 384 aa11.33□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Irx3P81067 507 aa11.32□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Tmco5bQ80X59 307 aa11.32□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Mak16Q8BGS0 296 aaKnown RBP11.32□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Erich6bQ9D4S6 220 aa11.32□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 AU015836B2RUM3 263 aa11.31□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Chmp3Q9CQ10 224 aa11.31□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 MecomP14404 1042 aa11.31□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Dcaf11Q91VU6 549 aa11.31□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Cabp1Q9JLK7 227 aa11.3□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Fyco1Q8VDC1 1437 aa11.3□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Ciz1Q8VEH2 845 aa11.3□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Iffo2Q8R2V2 512 aa11.29□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Dnttip2Q8R2M2 758 aaKnown RBP11.28□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 MsnP26041 577 aaKnown RBP11.28□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Golga2Q921M4 999 aa11.28□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Rock2P70336 1388 aa11.28□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Nup155Q99P88 1391 aaKnown RBP11.27□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Pcmtd1P59913 357 aa11.27□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 Fgd6Q69ZL1 1399 aa11.27□□□□□ -0.6
Snrnp200-201ENSMUST00000103220 CenpjQ569L8 1344 aa11.27□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Utp14aQ640M1 767 aaKnown RBP11.27□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Synj1Q8CHC4 1574 aa11.27□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Tpm3-rs7D3Z2H9 248 aa11.27□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Mphosph9A6H5Y1 991 aa11.26□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Tcerg1Q8CGF7 1100 aaKnown RBP11.26□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Srcin1Q9QWI6 1250 aa11.26□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Bcl11bQ99PV8 884 aa11.24□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Stard8Q8K031 1019 aa11.24□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 Carmil1Q6EDY6 1374 aa11.24□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 CadpsQ80TJ1 1355 aa11.24□□□□□ -0.61
Snrnp200-201ENSMUST00000103220 R3hcc1Q8BSI6 488 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms