RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Arhgef40Q3UPH7 1517 aa17.51■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Hnrnpul2Q00PI9 745 aaKnown RBP17.51■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Arhgap31A6X8Z5 1425 aa17.5■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Rfx7F8VPJ6 1459 aa17.5■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Kdm6bQ5NCY0 1641 aa17.49■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Mroh2aD3Z750 1679 aa17.49■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Fam71e1A1L3C1 212 aa17.49■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Adcy10Q8C0T9 1614 aa17.48■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Abcc5Q9R1X5 1436 aa17.48■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Ncoa2Q61026 1462 aa17.46■□□□□ 0.39
Vamp1-203ENSMUST00000100942 Ccdc141E9Q8Q6 1531 aa17.45■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Hspa5P20029 655 aaKnown RBP17.45■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Magi1Q6RHR9 1471 aa17.44■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Plekhh2Q8C115 1491 aa17.43■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Mapkbp1Q6NS57 1503 aa17.43■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Cabp1Q9JLK7 227 aa17.42■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Neo1P97798 1493 aa17.42■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Setbp1Q9Z180 1582 aa17.42■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Dhx57Q6P5D3 1388 aaKnown RBP17.41■□□□□ 0.38
Vamp1-203ENSMUST00000100942 SphkapQ6NSW3 1687 aa17.41■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Prex2Q3LAC4 1598 aa17.4■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Fam163aQ8CAA5 168 aa17.4■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Arhgef12Q8R4H2 1543 aaKnown RBP17.39■□□□□ 0.38
Vamp1-203ENSMUST00000100942 Rrbp1Q99PL5 1605 aaKnown RBP17.39■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Tnnt3Q9QZ47 272 aa17.37■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Ube2uB1AUC4 352 aa17.37■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Kdm3bQ6ZPY7 1562 aa17.37■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Jph4Q80WT0 628 aa17.36■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Camsap2Q8C1B1 1461 aa17.35■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Naip5Q9R016 1403 aa17.35■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Il16O54824 1322 aa17.35■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Mtus2Q3UHD3 1353 aa17.35■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Fgd6Q69ZL1 1399 aa17.35■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Mphosph9A6H5Y1 991 aa17.35■□□□□ 0.37
Vamp1-203ENSMUST00000100942 NclP09405 707 aaKnown RBP17.34■□□□□ 0.37
Vamp1-203ENSMUST00000100942 Adgrb2Q8CGM1 1561 aa17.32■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Mlh3A0A1Y7VMP7 1443 aa17.31■□□□□ 0.36
Vamp1-203ENSMUST00000100942 AknaQ80VW7 1404 aa17.31■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Kif21bQ9QXL1 1668 aa17.3■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Lamc1P02468 1607 aaKnown RBP17.3■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Zfp644E9QA22 1323 aa17.3■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Slc24a1Q91WD8 1130 aa17.29■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Fam208aQ69ZR9 1610 aaKnown RBP17.29■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Fancd2Q80V62 1450 aa17.29■□□□□ 0.36
Vamp1-203ENSMUST00000100942 AlkP97793 1621 aa17.29■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Caskin1Q6P9K8 1431 aa17.28■□□□□ 0.36
Vamp1-203ENSMUST00000100942 Gm13697A2AK42 830 aa17.25■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Tdrd9Q14BI7 1383 aa17.25■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Fkbp15Q6P9Q6 1216 aaKnown RBP17.24■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Ifnlr1Q8CGK5 535 aa17.23■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Chd1P40201 1711 aa17.23■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Gm14025A2AP89 1413 aa17.22■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Rprd2Q6NXI6 1469 aaKnown RBP17.22■□□□□ 0.35
Vamp1-203ENSMUST00000100942 Pkd2O35245 966 aa17.21■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Rtl5Q5DTT4 599 aa17.2■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Supt6hQ62383 1726 aaKnown RBP17.19■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Fmn2Q9JL04 1578 aa17.18■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Abcc1O35379 1528 aa17.18■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Trpm2Q91YD4 1506 aa17.18■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Usp47Q8BY87 1376 aa17.18■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Rnf17Q99MV7 1640 aa17.18■□□□□ 0.34
Vamp1-203ENSMUST00000100942 NhsB1AV60 1647 aa17.17■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Kiaa1210E9Q0C6 1637 aa17.17■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Pik3c2gO70167 1506 aa17.17■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Gm32742A0A1B0GT42 1604 aa17.16■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Pdcd11Q6NS46 1862 aaKnown RBP17.15■□□□□ 0.34
Vamp1-203ENSMUST00000100942 Pprc1Q6NZN1 1644 aa17.14■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Anp32aO35381 247 aa17.13■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Ttll5Q8CHB8 1328 aa17.12■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Arhgap5P97393 1501 aa17.12■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Wdr7Q920I9 1489 aa17.11■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Adgrl2Q8JZZ7 1487 aa17.1■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Kif14L0N7N1 1674 aaKnown RBP17.1■□□□□ 0.33
Vamp1-203ENSMUST00000100942 PrkcshO08795 521 aa17.1■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Mast1Q9R1L5 1570 aa17.09■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Sin3aQ60520 1274 aaKnown RBP17.09■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Ttbk1Q6PCN3 1308 aa17.09■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Dhx9O70133 1380 aaKnown RBP17.08■□□□□ 0.33
Vamp1-203ENSMUST00000100942 Trappc8E9PWG2 1437 aa17.08■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Nup155Q99P88 1391 aaKnown RBP17.08■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Abca8bQ8K440 1620 aa17.08■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Cfap74Q3UY96 1578 aa17.07■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Neurl4Q5NCX5 1563 aa17.06■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Lrrc9Q8CDN9 1456 aa17.06■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Hecw1Q8K4P8 1604 aa17.04■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Trak1Q6PD31 939 aa17.04■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Ssh2Q5SW75 1423 aa17.03■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Abcc3B2RX12 1523 aa17.03■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Atp10dQ8K2X1 1416 aa17.02■□□□□ 0.32
Vamp1-203ENSMUST00000100942 Cdc42bpbQ7TT50 1713 aa17.02■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Mbd5B1AYB6 1498 aa17.01■□□□□ 0.31
Vamp1-203ENSMUST00000100942 DroshaQ5HZJ0 1373 aaKnown RBP17.01■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Eif5bQ05D44 1216 aaKnown RBP17.01■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Pelp1Q9DBD5 1123 aaKnown RBP17.01■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Map4P27546 1125 aaKnown RBP17■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Asxl1P59598 1514 aa17■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Sart1Q9Z315 806 aaKnown RBP16.99■□□□□ 0.31
Vamp1-203ENSMUST00000100942 PtprgQ05909 1442 aa16.99■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Ncoa1P70365 1447 aa16.99■□□□□ 0.31
Vamp1-203ENSMUST00000100942 Znf608Q56A10 1511 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms