RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Mapkbp1Q6NS57 1503 aa34.52■■■■□ 3.12
Scn1b-201ENSMUST00000098548 Abca8bQ8K440 1620 aa34.48■■■■□ 3.11
Scn1b-201ENSMUST00000098548 Ppp1r18Q8BQ30 594 aa34.46■■■■□ 3.11
Scn1b-201ENSMUST00000098548 Lmtk2Q3TYD6 1471 aa34.43■■■■□ 3.1
Scn1b-201ENSMUST00000098548 Fam208aQ69ZR9 1610 aaKnown RBP34.42■■■■□ 3.1
Scn1b-201ENSMUST00000098548 Ccnb3Q810T2 1396 aa34.4■■■■□ 3.1
Scn1b-201ENSMUST00000098548 Clasp1Q80TV8 1535 aaKnown RBP34.38■■■■□ 3.09
Scn1b-201ENSMUST00000098548 Depdc5P61460 1591 aa34.31■■■■□ 3.08
Scn1b-201ENSMUST00000098548 A2mQ6GQT1 1474 aa34.3■■■■□ 3.08
Scn1b-201ENSMUST00000098548 UbtfP25976 765 aaKnown RBP34.28■■■■□ 3.08
Scn1b-201ENSMUST00000098548 Ttc37F8VPK0 1563 aa34.27■■■■□ 3.08
Scn1b-201ENSMUST00000098548 Adcy10Q8C0T9 1614 aa34.25■■■■□ 3.07
Scn1b-201ENSMUST00000098548 Zfyve16Q80U44 1528 aa34.25■■■■□ 3.07
Scn1b-201ENSMUST00000098548 Pcdh10E9PXQ7 1057 aa34.23■■■■□ 3.07
Scn1b-201ENSMUST00000098548 Arhgef40Q3UPH7 1517 aa34.22■■■■□ 3.07
Scn1b-201ENSMUST00000098548 Rnf17Q99MV7 1640 aa34.2■■■■□ 3.07
Scn1b-201ENSMUST00000098548 Arhgap5P97393 1501 aa34.19■■■■□ 3.06
Scn1b-201ENSMUST00000098548 Mlh3A0A1Y7VMP7 1443 aa34.15■■■■□ 3.06
Scn1b-201ENSMUST00000098548 Tdrd9Q14BI7 1383 aa34.14■■■■□ 3.06
Scn1b-201ENSMUST00000098548 3425401B19RikD3Z1D3 1412 aa34.13■■■■□ 3.05
Scn1b-201ENSMUST00000098548 Kdm6bQ5NCY0 1641 aa34.11■■■■□ 3.05
Scn1b-201ENSMUST00000098548 AglF8VPN4 1532 aa34.09■■■■□ 3.05
Scn1b-201ENSMUST00000098548 Abca9Q8K449 1623 aa34.08■■■■□ 3.05
Scn1b-201ENSMUST00000098548 Caskin1Q6P9K8 1431 aa34.07■■■■□ 3.04
Scn1b-201ENSMUST00000098548 AdgbG3UZ78 1657 aa34.06■■■■□ 3.04
Scn1b-201ENSMUST00000098548 Mier1Q5UAK0 511 aa34.03■■■■□ 3.04
Scn1b-201ENSMUST00000098548 Gm32742A0A1B0GT42 1604 aa34.03■■■■□ 3.04
Scn1b-201ENSMUST00000098548 NefmP08553 848 aa34.02■■■■□ 3.04
Scn1b-201ENSMUST00000098548 Trappc8E9PWG2 1437 aa34.01■■■■□ 3.04
Scn1b-201ENSMUST00000098548 Pdcd11Q6NS46 1862 aaKnown RBP33.96■■■■□ 3.03
Scn1b-201ENSMUST00000098548 Kidins220E9Q9B7 1793 aa33.95■■■■□ 3.02
Scn1b-201ENSMUST00000098548 Cfap74Q3UY96 1578 aa33.93■■■■□ 3.02
Scn1b-201ENSMUST00000098548 Fndc1E9Q043 1732 aa33.91■■■■□ 3.02
Scn1b-201ENSMUST00000098548 Abcc3B2RX12 1523 aa33.9■■■■□ 3.02
Scn1b-201ENSMUST00000098548 Abcc5Q9R1X5 1436 aa33.89■■■■□ 3.02
Scn1b-201ENSMUST00000098548 Cdk11bP24788 784 aaKnown RBP33.89■■■■□ 3.02
Scn1b-201ENSMUST00000098548 Sart1Q9Z315 806 aaKnown RBP33.82■■■■□ 3
Scn1b-201ENSMUST00000098548 Ncapd3Q6ZQK0 1506 aa33.82■■■■□ 3
Scn1b-201ENSMUST00000098548 Plekhh2Q8C115 1491 aa33.82■■■■□ 3
Scn1b-201ENSMUST00000098548 Chic2Q9D9G3 165 aa33.81■■■■□ 3
Scn1b-201ENSMUST00000098548 Mtus2Q3UHD3 1353 aa33.79■■■■□ 3
Scn1b-201ENSMUST00000098548 Lemd3Q9WU40 921 aa33.78■■■■□ 3
Scn1b-201ENSMUST00000098548 Cabp1Q9JLK7 227 aa33.77■■■■□ 3
Scn1b-201ENSMUST00000098548 Cdc42bpbQ7TT50 1713 aa33.76■■■□□ 2.99
Scn1b-201ENSMUST00000098548 Fam50aQ9WV03 339 aaKnown RBP33.76■■■□□ 2.99
Scn1b-201ENSMUST00000098548 OvosQ3UU35 1456 aa33.73■■■□□ 2.99
Scn1b-201ENSMUST00000098548 Kiaa0556Q8C753 1610 aa33.73■■■□□ 2.99
Scn1b-201ENSMUST00000098548 Naip2Q9QUK4 1447 aa33.72■■■□□ 2.99
Scn1b-201ENSMUST00000098548 Hecw1Q8K4P8 1604 aa33.68■■■□□ 2.98
Scn1b-201ENSMUST00000098548 Dnajc5gQ8C632 165 aa33.66■■■□□ 2.98
Scn1b-201ENSMUST00000098548 SphkapQ6NSW3 1687 aa33.64■■■□□ 2.98
Scn1b-201ENSMUST00000098548 Kdm5cP41230 1554 aa33.62■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Hecw2Q6I6G8 1578 aa33.62■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Ptch1Q61115 1434 aa33.62■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Il16O54824 1322 aa33.61■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Synj2Q9D2G5 1434 aa33.6■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Adgrb2Q8CGM1 1561 aa33.6■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Fmn2Q9JL04 1578 aa33.59■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Map3k5O35099 1380 aa33.58■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Mast1Q9R1L5 1570 aa33.58■■■□□ 2.97
Scn1b-201ENSMUST00000098548 Rrp7aQ9D1C9 280 aaKnown RBP33.57■■■□□ 2.96
Scn1b-201ENSMUST00000098548 Kdm3bQ6ZPY7 1562 aa33.57■■■□□ 2.96
Scn1b-201ENSMUST00000098548 UacaQ8CGB3 1411 aa33.56■■■□□ 2.96
Scn1b-201ENSMUST00000098548 Plppr3Q7TPB0 716 aa33.55■■■□□ 2.96
Scn1b-201ENSMUST00000098548 Dip2cE9PWR4 1557 aa33.55■■■□□ 2.96
Scn1b-201ENSMUST00000098548 Cul9Q80TT8 1865 aa33.53■■■□□ 2.96
Scn1b-201ENSMUST00000098548 RereQ80TZ9 1558 aa33.51■■■□□ 2.95
Scn1b-201ENSMUST00000098548 Yeats2Q3TUF7 1407 aa33.5■■■□□ 2.95
Scn1b-201ENSMUST00000098548 Atp10aO54827 1508 aa33.5■■■□□ 2.95
Scn1b-201ENSMUST00000098548 Neurl4Q5NCX5 1563 aa33.48■■■□□ 2.95
Scn1b-201ENSMUST00000098548 Rfx7F8VPJ6 1459 aa33.46■■■□□ 2.95
Scn1b-201ENSMUST00000098548 Mia2Q91ZV0 1396 aa33.44■■■□□ 2.94
Scn1b-201ENSMUST00000098548 Adgrl2Q8JZZ7 1487 aa33.43■■■□□ 2.94
Scn1b-201ENSMUST00000098548 Prdm16A2A935 1275 aa33.43■■■□□ 2.94
Scn1b-201ENSMUST00000098548 Nos1Q9Z0J4 1429 aa33.42■■■□□ 2.94
Scn1b-201ENSMUST00000098548 Qser1A2BIE1 1698 aa33.42■■■□□ 2.94
Scn1b-201ENSMUST00000098548 Xrn1P97789 1719 aaKnown RBP33.41■■■□□ 2.94
Scn1b-201ENSMUST00000098548 NclP09405 707 aaKnown RBP33.41■■■□□ 2.94
Scn1b-201ENSMUST00000098548 Fhad1A6PWD2 1420 aa33.38■■■□□ 2.93
Scn1b-201ENSMUST00000098548 Dennd4bQ3U1Y4 1499 aa33.38■■■□□ 2.93
Scn1b-201ENSMUST00000098548 Vps8Q0P5W1 1427 aa33.35■■■□□ 2.93
Scn1b-201ENSMUST00000098548 Ssh2Q5SW75 1423 aa33.34■■■□□ 2.93
Scn1b-201ENSMUST00000098548 Kif14L0N7N1 1674 aaKnown RBP33.31■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Fhod3Q76LL6 1578 aa33.3■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Zbtb7cQ8VCZ7 619 aa33.3■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Znf518aB2RRF6 1478 aaKnown RBP33.28■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Abca17E9PX95 1733 aa33.28■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Zfp644E9QA22 1323 aa33.28■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Spag9Q58A65 1321 aaKnown RBP33.28■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Cdc42bpgQ80UW5 1551 aa33.28■■■□□ 2.92
Scn1b-201ENSMUST00000098548 Cfap65Q3V0B4 1847 aa33.27■■■□□ 2.92
Scn1b-201ENSMUST00000098548 AlkP97793 1621 aa33.25■■■□□ 2.91
Scn1b-201ENSMUST00000098548 NpatQ8BMA5 1420 aa33.25■■■□□ 2.91
Scn1b-201ENSMUST00000098548 Ube2uB1AUC4 352 aa33.24■■■□□ 2.91
Scn1b-201ENSMUST00000098548 Zmym4A2A791 1549 aaKnown RBP33.22■■■□□ 2.91
Scn1b-201ENSMUST00000098548 Kif3bQ61771 747 aa33.22■■■□□ 2.91
Scn1b-201ENSMUST00000098548 Gli2Q0VGT2 1544 aa33.21■■■□□ 2.91
Scn1b-201ENSMUST00000098548 Usp54Q8BL06 1588 aaKnown RBP33.2■■■□□ 2.91
Scn1b-201ENSMUST00000098548 Naip6Q9JIB6 1403 aa33.19■■■□□ 2.9
Scn1b-201ENSMUST00000098548 Trpm1Q2TV84 1622 aa33.17■■■□□ 2.9
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms