RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Pprc1Q6NZN1 1644 aa11.76□□□□□ -0.53
Syne1-202ENSMUST00000095899 Adcy10Q8C0T9 1614 aa11.76□□□□□ -0.53
Syne1-202ENSMUST00000095899 DiexfQ8BTT6 772 aaKnown RBP11.76□□□□□ -0.53
Syne1-202ENSMUST00000095899 Fgd6Q69ZL1 1399 aa11.75□□□□□ -0.53
Syne1-202ENSMUST00000095899 Hspa5P20029 655 aaKnown RBP11.74□□□□□ -0.53
Syne1-202ENSMUST00000095899 Rrbp1Q99PL5 1605 aaKnown RBP11.74□□□□□ -0.53
Syne1-202ENSMUST00000095899 Nop58Q6DFW4 536 aaKnown RBP11.74□□□□□ -0.53
Syne1-202ENSMUST00000095899 Abcc5Q9R1X5 1436 aa11.74□□□□□ -0.53
Syne1-202ENSMUST00000095899 Ccer2J3QPU5 274 aa11.73□□□□□ -0.53
Syne1-202ENSMUST00000095899 Fam50aQ9WV03 339 aaKnown RBP11.73□□□□□ -0.53
Syne1-202ENSMUST00000095899 WrnO09053 1401 aa11.72□□□□□ -0.53
Syne1-202ENSMUST00000095899 Kdm3bQ6ZPY7 1562 aa11.71□□□□□ -0.53
Syne1-202ENSMUST00000095899 Abcc1O35379 1528 aa11.71□□□□□ -0.54
Syne1-202ENSMUST00000095899 Cdk11bP24788 784 aaKnown RBP11.71□□□□□ -0.54
Syne1-202ENSMUST00000095899 Mapkbp1Q6NS57 1503 aa11.7□□□□□ -0.54
Syne1-202ENSMUST00000095899 AlkP97793 1621 aa11.7□□□□□ -0.54
Syne1-202ENSMUST00000095899 Arhgef12Q8R4H2 1543 aaKnown RBP11.69□□□□□ -0.54
Syne1-202ENSMUST00000095899 Neo1P97798 1493 aa11.69□□□□□ -0.54
Syne1-202ENSMUST00000095899 Adgrb2Q8CGM1 1561 aa11.68□□□□□ -0.54
Syne1-202ENSMUST00000095899 Supt6hQ62383 1726 aaKnown RBP11.67□□□□□ -0.54
Syne1-202ENSMUST00000095899 Trpm2Q91YD4 1506 aa11.67□□□□□ -0.54
Syne1-202ENSMUST00000095899 Rprd2Q6NXI6 1469 aaKnown RBP11.65□□□□□ -0.54
Syne1-202ENSMUST00000095899 Fam208aQ69ZR9 1610 aaKnown RBP11.65□□□□□ -0.54
Syne1-202ENSMUST00000095899 Gm13697A2AK42 830 aa11.65□□□□□ -0.54
Syne1-202ENSMUST00000095899 Kif14L0N7N1 1674 aaKnown RBP11.64□□□□□ -0.55
Syne1-202ENSMUST00000095899 Arhgap27A2AB59 869 aa11.64□□□□□ -0.55
Syne1-202ENSMUST00000095899 Prex2Q3LAC4 1598 aa11.64□□□□□ -0.55
Syne1-202ENSMUST00000095899 Ube2uB1AUC4 352 aa11.63□□□□□ -0.55
Syne1-202ENSMUST00000095899 Chic2Q9D9G3 165 aa11.63□□□□□ -0.55
Syne1-202ENSMUST00000095899 Kiaa1210E9Q0C6 1637 aa11.62□□□□□ -0.55
Syne1-202ENSMUST00000095899 AknaQ80VW7 1404 aa11.62□□□□□ -0.55
Syne1-202ENSMUST00000095899 Il16O54824 1322 aa11.62□□□□□ -0.55
Syne1-202ENSMUST00000095899 Magi1Q6RHR9 1471 aa11.62□□□□□ -0.55
Syne1-202ENSMUST00000095899 Arhgap31A6X8Z5 1425 aa11.62□□□□□ -0.55
Syne1-202ENSMUST00000095899 Pdcd11Q6NS46 1862 aaKnown RBP11.62□□□□□ -0.55
Syne1-202ENSMUST00000095899 Zfp644E9QA22 1323 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 NhsB1AV60 1647 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 Cep170Q6A065 1588 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 Mphosph9A6H5Y1 991 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 Mbd5B1AYB6 1498 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 Plekhh2Q8C115 1491 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 Cabp1Q9JLK7 227 aa11.61□□□□□ -0.55
Syne1-202ENSMUST00000095899 Gm14025A2AP89 1413 aa11.6□□□□□ -0.55
Syne1-202ENSMUST00000095899 Ccdc141E9Q8Q6 1531 aa11.6□□□□□ -0.55
Syne1-202ENSMUST00000095899 Pik3c2gO70167 1506 aa11.6□□□□□ -0.55
Syne1-202ENSMUST00000095899 Gapvd1Q6PAR5 1458 aa11.58□□□□□ -0.56
Syne1-202ENSMUST00000095899 Fam163aQ8CAA5 168 aa11.57□□□□□ -0.56
Syne1-202ENSMUST00000095899 Gm32742A0A1B0GT42 1604 aa11.57□□□□□ -0.56
Syne1-202ENSMUST00000095899 Col17a1Q07563 1470 aa11.56□□□□□ -0.56
Syne1-202ENSMUST00000095899 PtprtQ99M80 1454 aa11.56□□□□□ -0.56
Syne1-202ENSMUST00000095899 Pabpn1Q8CCS6 302 aaKnown RBP11.56□□□□□ -0.56
Syne1-202ENSMUST00000095899 Mlh3A0A1Y7VMP7 1443 aa11.55□□□□□ -0.56
Syne1-202ENSMUST00000095899 Ncoa1P70365 1447 aa11.55□□□□□ -0.56
Syne1-202ENSMUST00000095899 Bcl11aQ9QYE3 773 aa11.55□□□□□ -0.56
Syne1-202ENSMUST00000095899 Fmn2Q9JL04 1578 aa11.54□□□□□ -0.56
Syne1-202ENSMUST00000095899 Jph4Q80WT0 628 aa11.54□□□□□ -0.56
Syne1-202ENSMUST00000095899 Znf710Q3U288 666 aa11.54□□□□□ -0.56
Syne1-202ENSMUST00000095899 NclP09405 707 aaKnown RBP11.54□□□□□ -0.56
Syne1-202ENSMUST00000095899 Sin3aQ60520 1274 aaKnown RBP11.54□□□□□ -0.56
Syne1-202ENSMUST00000095899 Usp47Q8BY87 1376 aa11.53□□□□□ -0.56
Syne1-202ENSMUST00000095899 Asxl1P59598 1514 aa11.53□□□□□ -0.56
Syne1-202ENSMUST00000095899 Caskin1Q6P9K8 1431 aa11.53□□□□□ -0.56
Syne1-202ENSMUST00000095899 Rnf17Q99MV7 1640 aa11.53□□□□□ -0.56
Syne1-202ENSMUST00000095899 Mapk8ip2Q9ERE9 830 aa11.53□□□□□ -0.56
Syne1-202ENSMUST00000095899 Dhx57Q6P5D3 1388 aaKnown RBP11.52□□□□□ -0.56
Syne1-202ENSMUST00000095899 Ythdc2B2RR83 1445 aaKnown RBP11.52□□□□□ -0.57
Syne1-202ENSMUST00000095899 Mast1Q9R1L5 1570 aa11.52□□□□□ -0.57
Syne1-202ENSMUST00000095899 Abca8bQ8K440 1620 aa11.52□□□□□ -0.57
Syne1-202ENSMUST00000095899 Wdr7Q920I9 1489 aa11.51□□□□□ -0.57
Syne1-202ENSMUST00000095899 Iqgap1Q9JKF1 1657 aaKnown RBP11.51□□□□□ -0.57
Syne1-202ENSMUST00000095899 Fancd2Q80V62 1450 aa11.5□□□□□ -0.57
Syne1-202ENSMUST00000095899 Smg6P61406 1418 aaKnown RBP11.5□□□□□ -0.57
Syne1-202ENSMUST00000095899 Neurl4Q5NCX5 1563 aa11.5□□□□□ -0.57
Syne1-202ENSMUST00000095899 Ak9G3UYQ4 1894 aa11.5□□□□□ -0.57
Syne1-202ENSMUST00000095899 AI481877A2ALV5 1481 aa11.5□□□□□ -0.57
Syne1-202ENSMUST00000095899 Pkd2O35245 966 aa11.49□□□□□ -0.57
Syne1-202ENSMUST00000095899 Mtus2Q3UHD3 1353 aa11.49□□□□□ -0.57
Syne1-202ENSMUST00000095899 Dot1lQ6XZL8 1540 aa11.49□□□□□ -0.57
Syne1-202ENSMUST00000095899 Tubgcp6G5E8P0 1769 aa11.48□□□□□ -0.57
Syne1-202ENSMUST00000095899 Dhx9O70133 1380 aaKnown RBP11.48□□□□□ -0.57
Syne1-202ENSMUST00000095899 Cdc42bpbQ7TT50 1713 aa11.48□□□□□ -0.57
Syne1-202ENSMUST00000095899 Mug2P28666 1451 aa11.47□□□□□ -0.57
Syne1-202ENSMUST00000095899 Adgrl2Q8JZZ7 1487 aa11.47□□□□□ -0.57
Syne1-202ENSMUST00000095899 Ttll5Q8CHB8 1328 aa11.47□□□□□ -0.57
Syne1-202ENSMUST00000095899 Adgrl3Q80TS3 1537 aa11.47□□□□□ -0.57
Syne1-202ENSMUST00000095899 Lrrc9Q8CDN9 1456 aa11.46□□□□□ -0.57
Syne1-202ENSMUST00000095899 Hnrnpul2Q00PI9 745 aaKnown RBP11.45□□□□□ -0.58
Syne1-202ENSMUST00000095899 Tdrd9Q14BI7 1383 aa11.45□□□□□ -0.58
Syne1-202ENSMUST00000095899 DroshaQ5HZJ0 1373 aaKnown RBP11.45□□□□□ -0.58
Syne1-202ENSMUST00000095899 Hecw1Q8K4P8 1604 aa11.45□□□□□ -0.58
Syne1-202ENSMUST00000095899 Naip6Q9JIB6 1403 aa11.44□□□□□ -0.58
Syne1-202ENSMUST00000095899 Abcc3B2RX12 1523 aa11.44□□□□□ -0.58
Syne1-202ENSMUST00000095899 Pelp1Q9DBD5 1123 aaKnown RBP11.44□□□□□ -0.58
Syne1-202ENSMUST00000095899 Robo2Q7TPD3 1470 aa11.44□□□□□ -0.58
Syne1-202ENSMUST00000095899 PtprgQ05909 1442 aa11.44□□□□□ -0.58
Syne1-202ENSMUST00000095899 Cdk13Q69ZA1 1511 aaKnown RBP11.42□□□□□ -0.58
Syne1-202ENSMUST00000095899 Ssh2Q5SW75 1423 aa11.42□□□□□ -0.58
Syne1-202ENSMUST00000095899 Igf1rQ60751 1373 aa11.42□□□□□ -0.58
Syne1-202ENSMUST00000095899 Abca17E9PX95 1733 aa11.41□□□□□ -0.58
Syne1-202ENSMUST00000095899 Znf608Q56A10 1511 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms