RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Unc13aQ4KUS2 1712 aa12.77□□□□□ -0.36
Upf3b-201ENSMUST00000076265 Zbtb22Q9Z0G7 638 aa12.77□□□□□ -0.36
Upf3b-201ENSMUST00000076265 Synj1Q8CHC4 1574 aa12.76□□□□□ -0.37
Upf3b-201ENSMUST00000076265 DekQ7TNV0 380 aaKnown RBP12.76□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Cttnbp2B9EJA2 1648 aa12.74□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Kdm4aQ8BW72 1064 aa12.74□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Rtl1Q7M732 1744 aa12.74□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Brd4Q9ESU6 1400 aaKnown RBP12.74□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Mrc2Q64449 1479 aa12.73□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Tcf3P15806 651 aa12.73□□□□□ -0.37
Upf3b-201ENSMUST00000076265 E2f4Q8R0K9 410 aa12.73□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Slc4a2P13808 1237 aaKnown RBP12.72□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Ccdc69Q3TCJ8 202 aa12.72□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Mak16Q8BGS0 296 aaKnown RBP12.71□□□□□ -0.37
Upf3b-201ENSMUST00000076265 Arid4aF8VPQ2 1261 aaKnown RBP12.68□□□□□ -0.38
Upf3b-201ENSMUST00000076265 Pkd2O35245 966 aa12.68□□□□□ -0.38
Upf3b-201ENSMUST00000076265 Secisbp2lQ6A098 1086 aaKnown RBP12.68□□□□□ -0.38
Upf3b-201ENSMUST00000076265 Noa1Q9JJG9 693 aaKnown RBP12.67□□□□□ -0.38
Upf3b-201ENSMUST00000076265 Klhl34A2AI76 644 aa12.66□□□□□ -0.38
Upf3b-201ENSMUST00000076265 MafgO54790 162 aa12.65□□□□□ -0.39
Upf3b-201ENSMUST00000076265 Ccdc85aQ5SP85 500 aa12.65□□□□□ -0.39
Upf3b-201ENSMUST00000076265 MccE9PWI3 1003 aa12.63□□□□□ -0.39
Upf3b-201ENSMUST00000076265 Klf15Q9EPW2 415 aa12.63□□□□□ -0.39
Upf3b-201ENSMUST00000076265 SetQ9EQU5 289 aaKnown RBP12.61□□□□□ -0.39
Upf3b-201ENSMUST00000076265 Ppm1gQ61074 542 aa12.6□□□□□ -0.39
Upf3b-201ENSMUST00000076265 Ccdc9Q8VC31 543 aaKnown RBP12.6□□□□□ -0.39
Upf3b-201ENSMUST00000076265 AampJ3QN89 436 aa12.59□□□□□ -0.39
Upf3b-201ENSMUST00000076265 Rimbp2Q80U40 1072 aa12.59□□□□□ -0.39
Upf3b-201ENSMUST00000076265 Ppp4r2Q0VGB7 417 aa12.58□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Clstn1Q9EPL2 979 aa12.57□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Ak7Q9D2H2 614 aa12.55□□□□□ -0.4
Upf3b-201ENSMUST00000076265 UncxO08934 530 aa12.55□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Gimap8Q75N62 688 aa12.54□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Cux2P70298 1426 aa12.53□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Erich6D3Z6S9 713 aa12.53□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Trim41Q5NCC3 630 aa12.53□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Ankrd13aQ80UP5 588 aa12.53□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Chmp4bQ9D8B3 224 aaKnown RBP12.53□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Rsf1E9PWW9 1441 aaKnown RBP12.52□□□□□ -0.4
Upf3b-201ENSMUST00000076265 Kif15Q6P9L6 1387 aa12.52□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Neurod2Q62414 383 aa12.51□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Hoxd11P23813 323 aa12.5□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.5□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Zfyve27Q3TXX3 415 aa12.49□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Fam117aQ7TNF9 451 aa12.49□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Themis2Q91YX0 663 aa12.48□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Rbm27Q5SFM8 1060 aaKnown RBP12.48□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Tmco4Q91WU4 631 aa12.48□□□□□ -0.41
Upf3b-201ENSMUST00000076265 Lrriq1Q0P5X1 1673 aa12.44□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Lamc3Q9R0B6 1581 aa12.44□□□□□ -0.42
Upf3b-201ENSMUST00000076265 NgefQ8CHT1 710 aa12.43□□□□□ -0.42
Upf3b-201ENSMUST00000076265 ChgaP26339 463 aaKnown RBP12.43□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Znf704Q9ERQ3 566 aa12.42□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Sh3bp5Q9Z131 463 aa12.42□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Spink5Q148R4 1017 aa12.41□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Kif21aQ9QXL2 1672 aa12.4□□□□□ -0.42
Upf3b-201ENSMUST00000076265 C1qtnf12Q8R2Z0 308 aa12.4□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Dnajc14Q921R4 703 aa12.4□□□□□ -0.42
Upf3b-201ENSMUST00000076265 4933402E13RikQ9D4D2 429 aa12.4□□□□□ -0.42
Upf3b-201ENSMUST00000076265 Plekhg3Q4VAC9 1341 aa12.39□□□□□ -0.43
Upf3b-201ENSMUST00000076265 CanxP35564 591 aaKnown RBP12.38□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Cep126Q0VBV7 1103 aa12.38□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Gsdma3Q5Y4Y6 464 aa12.38□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Cwc22Q8C5N3 908 aaKnown RBP12.38□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Gtf2e1Q9D0D5 440 aa12.38□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Stk10O55098 966 aa12.37□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Pwp2Q8BU03 919 aaKnown RBP12.37□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Sirt1Q923E4 737 aa12.37□□□□□ -0.43
Upf3b-201ENSMUST00000076265 StimateQ3UF25 288 aa12.36□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Jade2Q6ZQF7 829 aa12.36□□□□□ -0.43
Upf3b-201ENSMUST00000076265 P3h3Q8CG70 732 aa12.36□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Fnbp4Q6ZQ03 1031 aa12.35□□□□□ -0.43
Upf3b-201ENSMUST00000076265 4930523C07RikE9Q2T4 99 aa12.34□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Lmod3E9QA62 571 aa12.34□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Slc7a3P70423 618 aa12.34□□□□□ -0.43
Upf3b-201ENSMUST00000076265 Arih1Q9Z1K5 555 aa12.34□□□□□ -0.43
Upf3b-201ENSMUST00000076265 1700122O11RikJ3QPW6 241 aa12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 PrimpolQ6P1E7 537 aa12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Smarca5Q91ZW3 1051 aaKnown RBP12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Hdac6Q9Z2V5 1149 aa12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Ppme1Q8BVQ5 386 aa12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Slc24a1Q91WD8 1130 aa12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Cep164Q5DU05 1446 aa12.33□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Hap1O35668 628 aa12.32□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Myt1lP97500 1187 aa12.32□□□□□ -0.44
Upf3b-201ENSMUST00000076265 SowahcQ8C0J6 512 aa12.32□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Apbb1Q9QXJ1 710 aa12.32□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Skor2A7M7C7 1008 aa12.31□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Slc24a3Q99PD7 645 aa12.31□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Ric3Q8BPM6 367 aa12.29□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Polr3glQ8R0C0 218 aa12.29□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Ipo4Q8VI75 1082 aa12.29□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Golga3P55937 1487 aa12.28□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Il27Q8K3I6 234 aa12.28□□□□□ -0.44
Upf3b-201ENSMUST00000076265 Mybpc2Q5XKE0 1136 aa12.27□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Plekhg5Q66T02 1073 aa12.27□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Dhx29Q6PGC1 1365 aaKnown RBP12.27□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Neurod1Q60867 357 aa12.26□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Robo4Q8C310 1012 aa12.26□□□□□ -0.45
Upf3b-201ENSMUST00000076265 TnnQ80Z71 1560 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 186.8 ms