RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Kdm6bQ5NCY0 1641 aa16.48■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Mlh3A0A1Y7VMP7 1443 aa16.48■□□□□ 0.23
Vamp1-202ENSMUST00000063588 AknaQ80VW7 1404 aa16.48■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Abcc5Q9R1X5 1436 aa16.48■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Fam208aQ69ZR9 1610 aaKnown RBP16.46■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Gm14025A2AP89 1413 aa16.46■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Fancd2Q80V62 1450 aa16.46■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Caskin1Q6P9K8 1431 aa16.45■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Cdk11bP24788 784 aaKnown RBP16.45■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Il16O54824 1322 aa16.44■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Abcc1O35379 1528 aa16.43■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Pdcd11Q6NS46 1862 aaKnown RBP16.43■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Wdr7Q920I9 1489 aa16.43■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Kdm3bQ6ZPY7 1562 aa16.41■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Mtus2Q3UHD3 1353 aa16.41■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Eid3Q3V124 375 aa16.41■□□□□ 0.22
Vamp1-202ENSMUST00000063588 NhsB1AV60 1647 aa16.4■□□□□ 0.22
Vamp1-202ENSMUST00000063588 Setbp1Q9Z180 1582 aa16.4■□□□□ 0.22
Vamp1-202ENSMUST00000063588 SphkapQ6NSW3 1687 aa16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 ClspnQ80YR7 1315 aa16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Rnf17Q99MV7 1640 aa16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 NclP09405 707 aaKnown RBP16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Chic2Q9D9G3 165 aa16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Sall2Q9QX96 1004 aa16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Lamc1P02468 1607 aaKnown RBP16.39■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Kif21bQ9QXL1 1668 aa16.38■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Cabp1Q9JLK7 227 aa16.37■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Aebp2Q9Z248 504 aaKnown RBP16.36■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Wdr66E9Q743 1299 aa16.34■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Camsap2Q8C1B1 1461 aa16.33■□□□□ 0.21
Vamp1-202ENSMUST00000063588 Fmn2Q9JL04 1578 aa16.32■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Cfap74Q3UY96 1578 aa16.31■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Neurl4Q5NCX5 1563 aa16.3■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Gm32742A0A1B0GT42 1604 aa16.3■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Abca8bQ8K440 1620 aa16.3■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Tdrd9Q14BI7 1383 aa16.29■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Adgrb2Q8CGM1 1561 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Mast1Q9R1L5 1570 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 AlkP97793 1621 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Hecw1Q8K4P8 1604 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Mphosph9A6H5Y1 991 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Ube2uB1AUC4 352 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Myt1Q8CFC2 1127 aa16.28■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Igf1rQ60751 1373 aa16.27■□□□□ 0.2
Vamp1-202ENSMUST00000063588 Fkbp15Q6P9Q6 1216 aaKnown RBP16.26■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Adgrl2Q8JZZ7 1487 aa16.26■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Arhgap5P97393 1501 aa16.26■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Trpm2Q91YD4 1506 aa16.24■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Hspa5P20029 655 aaKnown RBP16.24■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Pprc1Q6NZN1 1644 aa16.24■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Naip5Q9R016 1403 aa16.24■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Abcc3B2RX12 1523 aa16.21■□□□□ 0.19
Vamp1-202ENSMUST00000063588 Atp10dQ8K2X1 1416 aa16.2■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Rprd2Q6NXI6 1469 aaKnown RBP16.19■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Ythdc2B2RR83 1445 aaKnown RBP16.19■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Supt6hQ62383 1726 aaKnown RBP16.18■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Pik3c2gO70167 1506 aa16.17■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Cdc42bpbQ7TT50 1713 aa16.16■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Gapvd1Q6PAR5 1458 aa16.16■□□□□ 0.18
Vamp1-202ENSMUST00000063588 DroshaQ5HZJ0 1373 aaKnown RBP16.15■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Zfp644E9QA22 1323 aa16.15■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Pkd2O35245 966 aa16.15■□□□□ 0.18
Vamp1-202ENSMUST00000063588 Lrrc9Q8CDN9 1456 aa16.15■□□□□ 0.18
Vamp1-202ENSMUST00000063588 AI481877A2ALV5 1481 aa16.13■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Gm13697A2AK42 830 aa16.13■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Kidins220E9Q9B7 1793 aa16.13■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Trappc8E9PWG2 1437 aa16.13■□□□□ 0.17
Vamp1-202ENSMUST00000063588 PtprtQ99M80 1454 aa16.13■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Nup155Q99P88 1391 aaKnown RBP16.11■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Usp47Q8BY87 1376 aa16.1■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Abca17E9PX95 1733 aa16.1■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Clstn2Q9ER65 966 aa16.1■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Prdm16A2A935 1275 aa16.09■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Pabpn1Q8CCS6 302 aaKnown RBP16.09■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Cep170Q6A065 1588 aa16.09■□□□□ 0.17
Vamp1-202ENSMUST00000063588 Sart1Q9Z315 806 aaKnown RBP16.08■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Ttll5Q8CHB8 1328 aa16.07■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Znf608Q56A10 1511 aa16.07■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Ssh2Q5SW75 1423 aa16.07■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Zfyve16Q80U44 1528 aa16.06■□□□□ 0.16
Vamp1-202ENSMUST00000063588 PtprgQ05909 1442 aa16.06■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Pelp1Q9DBD5 1123 aaKnown RBP16.04■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Kif14L0N7N1 1674 aaKnown RBP16.04■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Map4P27546 1125 aaKnown RBP16.03■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Kif1bQ60575 1816 aaKnown RBP16.03■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Rrp7aQ9D1C9 280 aaKnown RBP16.02■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Abca9Q8K449 1623 aa16.02■□□□□ 0.16
Vamp1-202ENSMUST00000063588 Trak1Q6PD31 939 aa16■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Dhx9O70133 1380 aaKnown RBP16■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Mbd5B1AYB6 1498 aa15.99■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Asxl1P59598 1514 aa15.99■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Xrn1P97789 1719 aaKnown RBP15.98■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Ppargc1bQ8VHJ7 1014 aa15.98■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Ak9G3UYQ4 1894 aa15.98■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Robo2Q7TPD3 1470 aa15.96■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Rock1P70335 1354 aa15.96■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Myo5cE9Q1F5 1742 aa15.96■□□□□ 0.15
Vamp1-202ENSMUST00000063588 ShprhQ7TPQ3 1674 aa15.96■□□□□ 0.15
Vamp1-202ENSMUST00000063588 Dot1lQ6XZL8 1540 aa15.96■□□□□ 0.14
Vamp1-202ENSMUST00000063588 Spag9Q58A65 1321 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 239.2 ms