RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Eif4g3Q80XI3 1579 aaKnown RBP22.36■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Chic2Q9D9G3 165 aa22.36■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Pik3c2gO70167 1506 aa22.35■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Abcc5Q9R1X5 1436 aa22.35■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Disp1Q3TDN0 1521 aa22.34■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Washc2Q6PGL7 1334 aa22.33■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Pbrm1Q8BSQ9 1634 aaKnown RBP22.32■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Plekhh2Q8C115 1491 aa22.32■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Plb1Q3TTY0 1478 aa22.31■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Rapgef6Q5NCJ1 1609 aa22.31■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Col17a1Q07563 1470 aa22.3■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Gm13695A2AK44 830 aa22.29■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Il16O54824 1322 aa22.29■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Usp47Q8BY87 1376 aa22.29■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Abca16E9PWJ7 1678 aa22.29■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Ube2uB1AUC4 352 aa22.27■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Kdm3bQ6ZPY7 1562 aa22.27■■□□□ 1.16
Ttc39b-202ENSMUST00000048274 Arhgef12Q8R4H2 1543 aaKnown RBP22.27■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Ncoa3O09000 1398 aa22.26■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 PxdnQ3UQ28 1475 aa22.25■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Rtl5Q5DTT4 599 aa22.25■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Cabp1Q9JLK7 227 aa22.25■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Cdc42bpaQ3UU96 1719 aa22.25■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Arhgef40Q3UPH7 1517 aa22.25■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Pkd2O35245 966 aa22.24■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Kiaa1551Q5DTW7 1521 aa22.24■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Mbd5B1AYB6 1498 aa22.24■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 SphkapQ6NSW3 1687 aa22.24■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Setd1bQ8CFT2 1985 aa22.24■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Arhgef11Q68FM7 1552 aa22.23■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Kdm6bQ5NCY0 1641 aa22.21■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 DroshaQ5HZJ0 1373 aaKnown RBP22.21■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Adcy10Q8C0T9 1614 aa22.21■■□□□ 1.15
Ttc39b-202ENSMUST00000048274 Nup160Q9Z0W3 1402 aaKnown RBP22.2■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 AlkP97793 1621 aa22.19■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 Plekhg5Q66T02 1073 aa22.17■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 WrnO09053 1401 aa22.17■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 Map3k4O08648 1597 aa22.15■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 Mtus2Q3UHD3 1353 aa22.15■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 Nolc1E9Q5C9 702 aaKnown RBP22.15■■□□□ 1.14
Ttc39b-202ENSMUST00000048274 Slc4a2P13808 1237 aaKnown RBP22.13■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 PnisrA2AJT4 805 aaKnown RBP22.13■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Cwc22Q8C5N3 908 aaKnown RBP22.13■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Dhx57Q6P5D3 1388 aaKnown RBP22.12■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Trpm2Q91YD4 1506 aa22.11■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Mrs2Q5NCE8 434 aa22.1■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Naip6Q9JIB6 1403 aa22.1■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Mapkbp1Q6NS57 1503 aa22.1■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Abcc2Q8VI47 1543 aa22.1■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Zfp644E9QA22 1323 aa22.09■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Kif14L0N7N1 1674 aaKnown RBP22.08■■□□□ 1.13
Ttc39b-202ENSMUST00000048274 Adgrb2Q8CGM1 1561 aa22.07■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Pabpn1Q8CCS6 302 aaKnown RBP22.05■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Mlh3A0A1Y7VMP7 1443 aa22.03■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Fam163aQ8CAA5 168 aa22.03■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Exoc6Q8R313 802 aa22.02■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Supt16hQ920B9 1047 aa22.02■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Supt6hQ62383 1726 aaKnown RBP22.02■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Mug2P28666 1451 aa22.02■■□□□ 1.12
Ttc39b-202ENSMUST00000048274 Dapk1Q80YE7 1442 aa22.02■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Myom3A2ABU4 1439 aa22.01■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Caskin1Q6P9K8 1431 aa22.01■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Wdr43Q6ZQL4 677 aaKnown RBP22.01■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 NrdcQ8BHG1 1161 aa22■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Cc2d2bA0A286YDU8 1405 aa22■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Magi1Q6RHR9 1471 aa21.99■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Cpsf1Q9EPU4 1441 aaKnown RBP21.98■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Wwc2Q6NXJ0 1187 aa21.97■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Pelp1Q9DBD5 1123 aaKnown RBP21.97■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Slc24a1Q91WD8 1130 aa21.96■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Ccdc141E9Q8Q6 1531 aa21.96■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Wdr7Q920I9 1489 aa21.96■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Dhx9O70133 1380 aaKnown RBP21.95■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Rock2P70336 1388 aa21.95■■□□□ 1.11
Ttc39b-202ENSMUST00000048274 Arhgap31A6X8Z5 1425 aa21.95■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 RalgapbQ8BQZ4 1484 aa21.95■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Fmn2Q9JL04 1578 aa21.94■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Mroh2aD3Z750 1679 aa21.93■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Ttll5Q8CHB8 1328 aa21.92■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Zcchc11B2RX14 1644 aaKnown RBP21.92■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Iqgap1Q9JKF1 1657 aaKnown RBP21.92■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Ppp4r2Q0VGB7 417 aa21.9■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Gapvd1Q6PAR5 1458 aa21.9■■□□□ 1.1
Ttc39b-202ENSMUST00000048274 Adgrl2Q8JZZ7 1487 aa21.88■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Rock1P70335 1354 aa21.87■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Arhgap27A2AB59 869 aa21.87■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Prex2Q3LAC4 1598 aa21.86■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Polr3aB2RXC6 1390 aa21.86■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Rundc1Q0VDN7 615 aa21.86■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Nup155Q99P88 1391 aaKnown RBP21.86■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Setd1aE9PYH6 1716 aa21.85■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Asxl1P59598 1514 aa21.85■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 PtprgQ05909 1442 aa21.84■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Neurl4Q5NCX5 1563 aa21.84■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Cdk13Q69ZA1 1511 aaKnown RBP21.83■■□□□ 1.09
Ttc39b-202ENSMUST00000048274 Mink1Q9JM52 1308 aa21.83■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Dot1lQ6XZL8 1540 aa21.83■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Eif5bQ05D44 1216 aaKnown RBP21.83■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Card11Q8CIS0 1159 aa21.83■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Zmym4A2A791 1549 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms