RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Arhgef11Q68FM7 1552 aa12.98□□□□□ -0.33
Usp28-201ENSMUST00000047349 Setd1bQ8CFT2 1985 aa12.97□□□□□ -0.33
Usp28-201ENSMUST00000047349 Mapk8ip2Q9ERE9 830 aa12.97□□□□□ -0.33
Usp28-201ENSMUST00000047349 Pkd2O35245 966 aa12.96□□□□□ -0.33
Usp28-201ENSMUST00000047349 Arhgap31A6X8Z5 1425 aa12.96□□□□□ -0.34
Usp28-201ENSMUST00000047349 Fam163aQ8CAA5 168 aa12.95□□□□□ -0.34
Usp28-201ENSMUST00000047349 Kiaa1551Q5DTW7 1521 aa12.95□□□□□ -0.34
Usp28-201ENSMUST00000047349 Rprd2Q6NXI6 1469 aaKnown RBP12.95□□□□□ -0.34
Usp28-201ENSMUST00000047349 Ccdc141E9Q8Q6 1531 aa12.95□□□□□ -0.34
Usp28-201ENSMUST00000047349 Usp47Q8BY87 1376 aa12.95□□□□□ -0.34
Usp28-201ENSMUST00000047349 Abcc2Q8VI47 1543 aa12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Lamc1P02468 1607 aaKnown RBP12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Magi1Q6RHR9 1471 aa12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Adcy10Q8C0T9 1614 aa12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Cdc42bpaQ3UU96 1719 aa12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Smg6P61406 1418 aaKnown RBP12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Arhgef40Q3UPH7 1517 aa12.94□□□□□ -0.34
Usp28-201ENSMUST00000047349 Lrriq1Q0P5X1 1673 aa12.93□□□□□ -0.34
Usp28-201ENSMUST00000047349 Dnajc5bQ9CQ94 199 aa12.93□□□□□ -0.34
Usp28-201ENSMUST00000047349 Kdm3bQ6ZPY7 1562 aa12.93□□□□□ -0.34
Usp28-201ENSMUST00000047349 Mlh3A0A1Y7VMP7 1443 aa12.92□□□□□ -0.34
Usp28-201ENSMUST00000047349 Pik3c2gO70167 1506 aa12.91□□□□□ -0.34
Usp28-201ENSMUST00000047349 Caskin1Q6P9K8 1431 aa12.91□□□□□ -0.34
Usp28-201ENSMUST00000047349 Mapkbp1Q6NS57 1503 aa12.9□□□□□ -0.34
Usp28-201ENSMUST00000047349 Pprc1Q6NZN1 1644 aa12.9□□□□□ -0.34
Usp28-201ENSMUST00000047349 Map3k4O08648 1597 aa12.89□□□□□ -0.35
Usp28-201ENSMUST00000047349 Sin3aQ60520 1274 aaKnown RBP12.88□□□□□ -0.35
Usp28-201ENSMUST00000047349 Arhgef12Q8R4H2 1543 aaKnown RBP12.88□□□□□ -0.35
Usp28-201ENSMUST00000047349 DroshaQ5HZJ0 1373 aaKnown RBP12.88□□□□□ -0.35
Usp28-201ENSMUST00000047349 Rusc2Q80U22 1514 aa12.88□□□□□ -0.35
Usp28-201ENSMUST00000047349 Kdm6bQ5NCY0 1641 aa12.87□□□□□ -0.35
Usp28-201ENSMUST00000047349 Kif21bQ9QXL1 1668 aa12.87□□□□□ -0.35
Usp28-201ENSMUST00000047349 Cwc22Q8C5N3 908 aaKnown RBP12.86□□□□□ -0.35
Usp28-201ENSMUST00000047349 Znf710Q3U288 666 aa12.86□□□□□ -0.35
Usp28-201ENSMUST00000047349 Ncoa1P70365 1447 aa12.86□□□□□ -0.35
Usp28-201ENSMUST00000047349 SphkapQ6NSW3 1687 aa12.86□□□□□ -0.35
Usp28-201ENSMUST00000047349 Hnrnpul2Q00PI9 745 aaKnown RBP12.86□□□□□ -0.35
Usp28-201ENSMUST00000047349 Zfp644E9QA22 1323 aa12.85□□□□□ -0.35
Usp28-201ENSMUST00000047349 Rrbp1Q99PL5 1605 aaKnown RBP12.84□□□□□ -0.35
Usp28-201ENSMUST00000047349 AlkP97793 1621 aa12.84□□□□□ -0.35
Usp28-201ENSMUST00000047349 Jph4Q80WT0 628 aa12.84□□□□□ -0.35
Usp28-201ENSMUST00000047349 Clstn2Q9ER65 966 aa12.84□□□□□ -0.35
Usp28-201ENSMUST00000047349 Prex2Q3LAC4 1598 aa12.83□□□□□ -0.36
Usp28-201ENSMUST00000047349 Adgrb2Q8CGM1 1561 aa12.83□□□□□ -0.36
Usp28-201ENSMUST00000047349 Nup155Q99P88 1391 aaKnown RBP12.82□□□□□ -0.36
Usp28-201ENSMUST00000047349 Tdrd9Q14BI7 1383 aa12.82□□□□□ -0.36
Usp28-201ENSMUST00000047349 Mroh2aD3Z750 1679 aa12.82□□□□□ -0.36
Usp28-201ENSMUST00000047349 Gm13695A2AK44 830 aa12.81□□□□□ -0.36
Usp28-201ENSMUST00000047349 Myt1Q8CFC2 1127 aa12.81□□□□□ -0.36
Usp28-201ENSMUST00000047349 Dnmt1P13864 1620 aaKnown RBP12.81□□□□□ -0.36
Usp28-201ENSMUST00000047349 Fancd2Q80V62 1450 aa12.8□□□□□ -0.36
Usp28-201ENSMUST00000047349 NrdcQ8BHG1 1161 aa12.8□□□□□ -0.36
Usp28-201ENSMUST00000047349 Neo1P97798 1493 aa12.8□□□□□ -0.36
Usp28-201ENSMUST00000047349 Fmn2Q9JL04 1578 aa12.79□□□□□ -0.36
Usp28-201ENSMUST00000047349 Fgd6Q69ZL1 1399 aa12.79□□□□□ -0.36
Usp28-201ENSMUST00000047349 Eif4g3Q80XI3 1579 aaKnown RBP12.78□□□□□ -0.36
Usp28-201ENSMUST00000047349 Rgl3Q3UYI5 709 aa12.77□□□□□ -0.36
Usp28-201ENSMUST00000047349 Ttll5Q8CHB8 1328 aa12.77□□□□□ -0.36
Usp28-201ENSMUST00000047349 Trak1Q6PD31 939 aa12.77□□□□□ -0.36
Usp28-201ENSMUST00000047349 Adgrl2Q8JZZ7 1487 aa12.77□□□□□ -0.37
Usp28-201ENSMUST00000047349 AknaQ80VW7 1404 aa12.77□□□□□ -0.37
Usp28-201ENSMUST00000047349 Map4P27546 1125 aaKnown RBP12.77□□□□□ -0.37
Usp28-201ENSMUST00000047349 Trpm2Q91YD4 1506 aa12.76□□□□□ -0.37
Usp28-201ENSMUST00000047349 Dapk1Q80YE7 1442 aa12.76□□□□□ -0.37
Usp28-201ENSMUST00000047349 Slc24a1Q91WD8 1130 aa12.76□□□□□ -0.37
Usp28-201ENSMUST00000047349 Hdac5Q9Z2V6 1113 aa12.75□□□□□ -0.37
Usp28-201ENSMUST00000047349 Mrs2Q5NCE8 434 aa12.75□□□□□ -0.37
Usp28-201ENSMUST00000047349 Plekhg5Q66T02 1073 aa12.75□□□□□ -0.37
Usp28-201ENSMUST00000047349 Dhx9O70133 1380 aaKnown RBP12.75□□□□□ -0.37
Usp28-201ENSMUST00000047349 Rock2P70336 1388 aa12.75□□□□□ -0.37
Usp28-201ENSMUST00000047349 Fkbp15Q6P9Q6 1216 aaKnown RBP12.75□□□□□ -0.37
Usp28-201ENSMUST00000047349 Mbd5B1AYB6 1498 aa12.74□□□□□ -0.37
Usp28-201ENSMUST00000047349 Card11Q8CIS0 1159 aa12.73□□□□□ -0.37
Usp28-201ENSMUST00000047349 Calr4Q3TQS0 420 aa12.73□□□□□ -0.37
Usp28-201ENSMUST00000047349 Fam208aQ69ZR9 1610 aaKnown RBP12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Anp32aO35381 247 aa12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Rundc1Q0VDN7 615 aa12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Arhgap5P97393 1501 aa12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Zcchc11B2RX14 1644 aaKnown RBP12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Myom3A2ABU4 1439 aa12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Cfap74Q3UY96 1578 aa12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Wdr7Q920I9 1489 aa12.72□□□□□ -0.37
Usp28-201ENSMUST00000047349 Gm14025A2AP89 1413 aa12.71□□□□□ -0.37
Usp28-201ENSMUST00000047349 Supt6hQ62383 1726 aaKnown RBP12.71□□□□□ -0.37
Usp28-201ENSMUST00000047349 Neurl4Q5NCX5 1563 aa12.71□□□□□ -0.38
Usp28-201ENSMUST00000047349 Lrrc9Q8CDN9 1456 aa12.7□□□□□ -0.38
Usp28-201ENSMUST00000047349 Gm38655A0A286YDK6 273 aa12.7□□□□□ -0.38
Usp28-201ENSMUST00000047349 Rock1P70335 1354 aa12.7□□□□□ -0.38
Usp28-201ENSMUST00000047349 Mast1Q9R1L5 1570 aa12.7□□□□□ -0.38
Usp28-201ENSMUST00000047349 Kif14L0N7N1 1674 aaKnown RBP12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 PtprgQ05909 1442 aa12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 Cpsf1Q9EPU4 1441 aaKnown RBP12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 Naip6Q9JIB6 1403 aa12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 Mug2P28666 1451 aa12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 Rnf17Q99MV7 1640 aa12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 Rrp7aQ9D1C9 280 aaKnown RBP12.69□□□□□ -0.38
Usp28-201ENSMUST00000047349 Kiaa1210E9Q0C6 1637 aa12.67□□□□□ -0.38
Usp28-201ENSMUST00000047349 Exoc6Q8R313 802 aa12.67□□□□□ -0.38
Usp28-201ENSMUST00000047349 Anp32bQ9EST5 272 aaKnown RBP12.67□□□□□ -0.38
Usp28-201ENSMUST00000047349 Asxl1P59598 1514 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms