RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Tmco5bQ80X59 307 aa21.33■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Birc3O08863 600 aa21.33■■□□□ 1
Col27a1-201ENSMUST00000036300 MecomP14404 1042 aa21.32■■□□□ 1
Col27a1-201ENSMUST00000036300 CgnP59242 1191 aa21.31■■□□□ 1
Col27a1-201ENSMUST00000036300 Chmp3Q9CQ10 224 aa21.29■■□□□ 1
Col27a1-201ENSMUST00000036300 Ccdc18Q640L5 1455 aa21.29■■□□□ 1
Col27a1-201ENSMUST00000036300 HdgfP51859 237 aaKnown RBP21.29■■□□□ 1
Col27a1-201ENSMUST00000036300 Slc4a3P16283 1227 aa21.28■■□□□ 1
Col27a1-201ENSMUST00000036300 Ciz1Q8VEH2 845 aa21.28■■□□□ 1
Col27a1-201ENSMUST00000036300 Txndc2Q6P902 515 aa21.27■■□□□ 1
Col27a1-201ENSMUST00000036300 Tpm3-rs7D3Z2H9 248 aa21.27■■□□□ 1
Col27a1-201ENSMUST00000036300 Sart3Q9JLI8 962 aaKnown RBP21.26■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Dcaf1Q80TR8 1506 aa21.26■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Gm973E9Q295 1059 aa21.25■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Ercc6F8VPZ5 1481 aa21.24■□□□□ 0.99
Col27a1-201ENSMUST00000036300 HnrnpuQ8VEK3 800 aaKnown RBP21.24■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Znf330Q922H9 316 aa21.24■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Tomm22Q9CPQ3 142 aa21.24■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Aebp2Q9Z248 504 aaKnown RBP21.24■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Rwdd1Q9CQK7 243 aa21.23■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Chrna2Q91X60 512 aa21.23■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Rsf1E9PWW9 1441 aaKnown RBP21.22■□□□□ 0.99
Col27a1-201ENSMUST00000036300 CrebrfQ8CDG5 640 aaKnown RBP21.22■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Pibf1E9Q6K3 756 aa21.2■□□□□ 0.99
Col27a1-201ENSMUST00000036300 Speer4f1Q9D5Q6 258 aa21.19■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Eea1Q8BL66 1411 aa21.18■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Brpf1B2RRD7 1212 aa21.18■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Pak3Q61036 559 aa21.18■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Ifit1bl1D3Z6F0 470 aa21.17■□□□□ 0.98
Col27a1-201ENSMUST00000036300 U2af1Q9D883 239 aaKnown RBP21.16■□□□□ 0.98
Col27a1-201ENSMUST00000036300 AknaQ80VW7 1404 aa21.16■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Ccdc27Q3V036 639 aa21.16■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Abcc8B2RUS7 1588 aa21.16■□□□□ 0.98
Col27a1-201ENSMUST00000036300 Spag9Q58A65 1321 aaKnown RBP21.13■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Gtf2e1Q9D0D5 440 aa21.13■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Cluap1Q8R3P7 413 aa21.12■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Ncbp3Q8BZR9 615 aaKnown RBP21.12■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Calcoco2A2A6M5 331 aa21.12■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Fhad1A6PWD2 1420 aa21.11■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Pde3bQ61409 1100 aa21.11■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Dnttip2Q8R2M2 758 aaKnown RBP21.11■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Rundc1Q0VDN7 615 aa21.08■□□□□ 0.97
Col27a1-201ENSMUST00000036300 Map4P27546 1125 aaKnown RBP21.07■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Kri1Q8VDQ9 704 aaKnown RBP21.07■□□□□ 0.96
Col27a1-201ENSMUST00000036300 GorabQ8BRM2 368 aa21.06■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Arid4aF8VPQ2 1261 aaKnown RBP21.06■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Tnnt2P50752 301 aa21.05■□□□□ 0.96
Col27a1-201ENSMUST00000036300 R3hcc1Q8BSI6 488 aa21.05■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Paf1Q8K2T8 535 aa21.04■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Gpatch11Q3UFS4 262 aa21.04■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Tmf1B9EKI3 1091 aa21.04■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Dcaf11Q91VU6 549 aa21.03■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Tpd52l1O54818 204 aa21.03■□□□□ 0.96
Col27a1-201ENSMUST00000036300 Mfap1aC0HKD8 439 aaKnown RBP21■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Mfap1bC0HKD9 439 aaKnown RBP21■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Chmp5Q9D7S9 219 aa21■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Cald1E9QA15 768 aaKnown RBP21■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Golga2Q921M4 999 aa20.99■□□□□ 0.95
Col27a1-201ENSMUST00000036300 SetQ9EQU5 289 aaKnown RBP20.99■□□□□ 0.95
Col27a1-201ENSMUST00000036300 BccipQ9CWI3 316 aa20.99■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Hspa5P20029 655 aaKnown RBP20.99■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Slc4a10Q5DTL9 1118 aa20.98■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Krt82Q99M74 516 aa20.98■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Ccer1Q9CQL2 403 aa20.98■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Ap3b2Q9JME5 1082 aa20.98■□□□□ 0.95
Col27a1-201ENSMUST00000036300 MsnP26041 577 aaKnown RBP20.97■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Lemd3Q9WU40 921 aa20.97■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Mbd3Q9Z2D8 285 aaKnown RBP20.97■□□□□ 0.95
Col27a1-201ENSMUST00000036300 PtmsQ9D0J8 101 aaKnown RBP20.96■□□□□ 0.95
Col27a1-201ENSMUST00000036300 AppP12023 770 aa20.96■□□□□ 0.95
Col27a1-201ENSMUST00000036300 Bcl11bQ99PV8 884 aa20.94■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Ftsj3Q9DBE9 838 aaKnown RBP20.93■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Tpm3P21107 285 aaKnown RBP20.92■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Dhx16G3X8X0 1044 aaKnown RBP20.92■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Ksr2Q3UVC0 959 aa20.92■□□□□ 0.94
Col27a1-201ENSMUST00000036300 RdxP26043 583 aaKnown RBP20.92■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Ccdc47Q9D024 483 aaKnown RBP20.92■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Gm21969J3QJZ1 289 aa20.91■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Ccar1Q8CH18 1146 aaKnown RBP20.91■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Pkd2O35245 966 aa20.91■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Trak1Q6PD31 939 aa20.9■□□□□ 0.94
Col27a1-201ENSMUST00000036300 SafbD3YXK2 937 aaKnown RBP20.9■□□□□ 0.94
Col27a1-201ENSMUST00000036300 Smarce1O54941 411 aaKnown RBP20.89■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Supt16hQ920B9 1047 aa20.89■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Mia2Q91ZV0 1396 aa20.89■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Kiaa0754Q69ZZ9 979 aa20.89■□□□□ 0.93
Col27a1-201ENSMUST00000036300 EspnQ9ET47 871 aa20.88■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Kif27Q7M6Z4 1394 aa20.88■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Cabp4Q8VHC5 271 aa20.87■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Tpm4Q6IRU2 248 aa20.86■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Dnai1Q8C0M8 701 aa20.86■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Fam193aQ8CGI1 1231 aaKnown RBP20.86■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Rpap1Q80TE0 1409 aa20.85■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Kif3bQ61771 747 aa20.85■□□□□ 0.93
Col27a1-201ENSMUST00000036300 AU015836B2RUM3 263 aa20.85■□□□□ 0.93
Col27a1-201ENSMUST00000036300 CrbnQ8C7D2 445 aa20.83■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Odf2A3KGV1 830 aaKnown RBP20.83■□□□□ 0.93
Col27a1-201ENSMUST00000036300 Ccdc43Q9CR29 222 aaKnown RBP20.83■□□□□ 0.92
Col27a1-201ENSMUST00000036300 1700123L14RikQ3V2K7 440 aa20.8■□□□□ 0.92
Col27a1-201ENSMUST00000036300 Hdgfl1Q2VPR5 283 aa20.8■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms