RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 KnstrnQ9D9Z1 312 aaKnown RBP9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 Rock2P70336 1388 aa9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 Ccdc9Q8VC31 543 aaKnown RBP9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 Ifit1bl1D3Z6F0 470 aa9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 MccE9PWI3 1003 aa9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 Rab11fip3Q8CHD8 1047 aa9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 Trim30dE9PWL0 497 aa9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 Spag9Q58A65 1321 aaKnown RBP9.92□□□□□ -0.82
Usp54-202ENSMUST00000035340 DekQ7TNV0 380 aaKnown RBP9.91□□□□□ -0.82
Usp54-202ENSMUST00000035340 Soga1E1U8D0 1418 aa9.91□□□□□ -0.82
Usp54-202ENSMUST00000035340 Rundc1Q0VDN7 615 aa9.9□□□□□ -0.82
Usp54-202ENSMUST00000035340 Trak1Q6PD31 939 aa9.9□□□□□ -0.82
Usp54-202ENSMUST00000035340 Ap3b2Q9JME5 1082 aa9.9□□□□□ -0.82
Usp54-202ENSMUST00000035340 Ccdc88bQ4QRL3 1481 aa9.9□□□□□ -0.82
Usp54-202ENSMUST00000035340 Cttnbp2B9EJA2 1648 aa9.9□□□□□ -0.83
Usp54-202ENSMUST00000035340 Cabp1Q9JLK7 227 aa9.9□□□□□ -0.83
Usp54-202ENSMUST00000035340 Mphosph9A6H5Y1 991 aa9.89□□□□□ -0.83
Usp54-202ENSMUST00000035340 Sart1Q9Z315 806 aaKnown RBP9.89□□□□□ -0.83
Usp54-202ENSMUST00000035340 Stk26Q99JT2 416 aa9.89□□□□□ -0.83
Usp54-202ENSMUST00000035340 Neurod2Q62414 383 aa9.89□□□□□ -0.83
Usp54-202ENSMUST00000035340 Cnga1P29974 684 aa9.89□□□□□ -0.83
Usp54-202ENSMUST00000035340 Rtn4Q99P72 1162 aaKnown RBP9.88□□□□□ -0.83
Usp54-202ENSMUST00000035340 Htatsf1Q8BGC0 757 aa9.88□□□□□ -0.83
Usp54-202ENSMUST00000035340 Ppm1gQ61074 542 aa9.87□□□□□ -0.83
Usp54-202ENSMUST00000035340 PtmsQ9D0J8 101 aaKnown RBP9.87□□□□□ -0.83
Usp54-202ENSMUST00000035340 1700019A02RikA0A087WPV9 146 aa9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 Rwdd1Q9CQK7 243 aa9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 Ccnb3Q810T2 1396 aa9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 Hsp90b1P08113 802 aaKnown RBP9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 Srcin1Q9QWI6 1250 aa9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 CatipB9EKE5 520 aa9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 Jph4Q80WT0 628 aa9.86□□□□□ -0.83
Usp54-202ENSMUST00000035340 CanxP35564 591 aaKnown RBP9.84□□□□□ -0.83
Usp54-202ENSMUST00000035340 Iqgap2Q3UQ44 1575 aa9.84□□□□□ -0.83
Usp54-202ENSMUST00000035340 Q3TQI7 289 aaKnown RBP9.84□□□□□ -0.83
Usp54-202ENSMUST00000035340 Synj1Q8CHC4 1574 aa9.84□□□□□ -0.83
Usp54-202ENSMUST00000035340 Trim44Q9QXA7 346 aa9.84□□□□□ -0.83
Usp54-202ENSMUST00000035340 Polr1aO35134 1717 aaKnown RBP9.83□□□□□ -0.84
Usp54-202ENSMUST00000035340 Sh3bp5Q9Z131 463 aa9.83□□□□□ -0.84
Usp54-202ENSMUST00000035340 Cecr2E9Q2Z1 1453 aa9.83□□□□□ -0.84
Usp54-202ENSMUST00000035340 Nsd2Q8BVE8 1365 aa9.83□□□□□ -0.84
Usp54-202ENSMUST00000035340 Efcab5A0JP43 1406 aa9.83□□□□□ -0.84
Usp54-202ENSMUST00000035340 Hspa5P20029 655 aaKnown RBP9.82□□□□□ -0.84
Usp54-202ENSMUST00000035340 U2af1Q9D883 239 aaKnown RBP9.82□□□□□ -0.84
Usp54-202ENSMUST00000035340 Utp14aQ640M1 767 aaKnown RBP9.82□□□□□ -0.84
Usp54-202ENSMUST00000035340 Ythdc1E9Q5K9 736 aaKnown RBP9.81□□□□□ -0.84
Usp54-202ENSMUST00000035340 Prdm16A2A935 1275 aa9.81□□□□□ -0.84
Usp54-202ENSMUST00000035340 Birc3O08863 600 aa9.81□□□□□ -0.84
Usp54-202ENSMUST00000035340 PtmaP26350 111 aa9.81□□□□□ -0.84
Usp54-202ENSMUST00000035340 Sox12Q04890 314 aa9.8□□□□□ -0.84
Usp54-202ENSMUST00000035340 Zscan21Q07231 555 aa9.8□□□□□ -0.84
Usp54-202ENSMUST00000035340 Cux1P53564 1515 aa9.8□□□□□ -0.84
Usp54-202ENSMUST00000035340 Wwc2Q6NXJ0 1187 aa9.8□□□□□ -0.84
Usp54-202ENSMUST00000035340 Golga2Q921M4 999 aa9.8□□□□□ -0.84
Usp54-202ENSMUST00000035340 Apbb1Q9QXJ1 710 aa9.79□□□□□ -0.84
Usp54-202ENSMUST00000035340 Casc1Q6TDU8 730 aa9.79□□□□□ -0.84
Usp54-202ENSMUST00000035340 Dcaf11Q91VU6 549 aa9.79□□□□□ -0.84
Usp54-202ENSMUST00000035340 U2surpQ6NV83 1029 aaKnown RBP9.79□□□□□ -0.84
Usp54-202ENSMUST00000035340 Cc2d2bA0A286YDU8 1405 aa9.79□□□□□ -0.84
Usp54-202ENSMUST00000035340 Mak16Q8BGS0 296 aaKnown RBP9.78□□□□□ -0.84
Usp54-202ENSMUST00000035340 Speer4f1Q9D5Q6 258 aa9.77□□□□□ -0.84
Usp54-202ENSMUST00000035340 Gm973E9Q295 1059 aa9.77□□□□□ -0.84
Usp54-202ENSMUST00000035340 Q8BT18 775 aa9.77□□□□□ -0.84
Usp54-202ENSMUST00000035340 Adam1bQ8R534 806 aa9.77□□□□□ -0.84
Usp54-202ENSMUST00000035340 Fgd6Q69ZL1 1399 aa9.76□□□□□ -0.85
Usp54-202ENSMUST00000035340 ErbinQ80TH2 1402 aa9.76□□□□□ -0.85
Usp54-202ENSMUST00000035340 Ccar1Q8CH18 1146 aaKnown RBP9.76□□□□□ -0.85
Usp54-202ENSMUST00000035340 Rassf8Q8CJ96 419 aa9.76□□□□□ -0.85
Usp54-202ENSMUST00000035340 Stk31Q99MW1 1018 aa9.76□□□□□ -0.85
Usp54-202ENSMUST00000035340 Clstn1Q9EPL2 979 aa9.76□□□□□ -0.85
Usp54-202ENSMUST00000035340 Pak3Q61036 559 aa9.75□□□□□ -0.85
Usp54-202ENSMUST00000035340 Smc4Q8CG47 1286 aa9.75□□□□□ -0.85
Usp54-202ENSMUST00000035340 Fan1Q69ZT1 1020 aa9.74□□□□□ -0.85
Usp54-202ENSMUST00000035340 Rapgef2Q8CHG7 1496 aa9.74□□□□□ -0.85
Usp54-202ENSMUST00000035340 Plcb2A3KGF7 1181 aa9.74□□□□□ -0.85
Usp54-202ENSMUST00000035340 Hmgb2P30681 210 aaKnown RBP9.74□□□□□ -0.85
Usp54-202ENSMUST00000035340 Ciz1Q8VEH2 845 aa9.74□□□□□ -0.85
Usp54-202ENSMUST00000035340 Shroom4Q1W617 1475 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 AampJ3QN89 436 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 Smarce1O54941 411 aaKnown RBP9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 Mrc2Q64449 1479 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 Urb2E9Q7L1 1524 aaKnown RBP9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 Cgnl1Q6AW69 1298 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 Ddx11Q6AXC6 880 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 Shq1Q7TMX5 569 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 ScribQ80U72 1612 aa9.73□□□□□ -0.85
Usp54-202ENSMUST00000035340 R3hcc1Q8BSI6 488 aa9.72□□□□□ -0.85
Usp54-202ENSMUST00000035340 Vsig10D3YX43 558 aa9.72□□□□□ -0.85
Usp54-202ENSMUST00000035340 Tpm3-rs7D3Z2H9 248 aa9.72□□□□□ -0.85
Usp54-202ENSMUST00000035340 Gsdma3Q5Y4Y6 464 aa9.72□□□□□ -0.85
Usp54-202ENSMUST00000035340 Anapc15P60007 132 aa9.72□□□□□ -0.85
Usp54-202ENSMUST00000035340 CadpsQ80TJ1 1355 aa9.72□□□□□ -0.85
Usp54-202ENSMUST00000035340 MecomP14404 1042 aa9.71□□□□□ -0.85
Usp54-202ENSMUST00000035340 Cabp4Q8VHC5 271 aa9.71□□□□□ -0.85
Usp54-202ENSMUST00000035340 Ccdc47Q9D024 483 aaKnown RBP9.71□□□□□ -0.86
Usp54-202ENSMUST00000035340 Znf316Q6PGE4 1016 aa9.71□□□□□ -0.86
Usp54-202ENSMUST00000035340 Arhgap31A6X8Z5 1425 aa9.71□□□□□ -0.86
Usp54-202ENSMUST00000035340 Fyb1O35601 819 aa9.7□□□□□ -0.86
Usp54-202ENSMUST00000035340 Atf3Q60765 181 aa9.7□□□□□ -0.86
Usp54-202ENSMUST00000035340 FanciQ8K368 1330 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms