RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Arid4bA2CG63 1314 aaKnown RBP14.85□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Iqcf3Q9D498 203 aa14.85□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Dnai1Q8C0M8 701 aa14.84□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Mak16Q8BGS0 296 aaKnown RBP14.84□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Tiam1Q60610 1591 aa14.82□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Kif27Q7M6Z4 1394 aa14.82□□□□□ -0.04
Topbp1-201ENSMUST00000035164 CrbnQ8C7D2 445 aa14.82□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Rpgrip1lQ8CG73 1264 aa14.82□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Carmil1Q6EDY6 1374 aa14.8□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Shroom4Q1W617 1475 aa14.8□□□□□ -0.04
Topbp1-201ENSMUST00000035164 3425401B19RikD3Z1D3 1412 aa14.8□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Kdm2aP59997 1161 aa14.8□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Vps8Q0P5W1 1427 aa14.8□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Ttll13A4Q9F6 804 aa14.8□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Vsig10D3YX43 558 aa14.79□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Q7TT23 1179 aa14.79□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Mtus2Q3UHD3 1353 aa14.79□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Ppm1gQ61074 542 aa14.79□□□□□ -0.04
Topbp1-201ENSMUST00000035164 Esx1O88933 382 aa14.77□□□□□ -0.04
Topbp1-201ENSMUST00000035164 TchhA0A0B4J1F9 1599 aa14.76□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Iqgap2Q3UQ44 1575 aa14.76□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Rwdd1Q9CQK7 243 aa14.76□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Zfp444Q3TDV8 331 aaKnown RBP14.75□□□□□ -0.05
Topbp1-201ENSMUST00000035164 EspnQ9ET47 871 aa14.75□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Naip5Q9R016 1403 aa14.74□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Dapk1Q80YE7 1442 aa14.73□□□□□ -0.05
Topbp1-201ENSMUST00000035164 NrkQ9R0G8 1455 aa14.73□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Eif2s2Q99L45 331 aaKnown RBP14.72□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Kdm5bQ80Y84 1544 aa14.72□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Speer4f1Q9D5Q6 258 aa14.72□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Taok2Q6ZQ29 1240 aa14.72□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Gm6268A2A3U9 297 aa14.71□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Map4P27546 1125 aaKnown RBP14.71□□□□□ -0.05
Topbp1-201ENSMUST00000035164 Ecm2Q5FW85 670 aa14.7□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Cux2P70298 1426 aa14.7□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Atad2bE9Q166 1460 aaKnown RBP14.7□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Mroh2bQ7M6Y6 1581 aa14.69□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Inpp5dQ9ES52 1191 aa14.69□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Dnttip2Q8R2M2 758 aaKnown RBP14.69□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Pknox2Q8BG99 474 aa14.69□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Naip2Q9QUK4 1447 aa14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Pank3Q8R2W9 370 aa14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Ifit1bl1D3Z6F0 470 aa14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Rrp7aQ9D1C9 280 aaKnown RBP14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 NudcO35685 332 aaKnown RBP14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Prkrip1Q9CWV6 186 aaKnown RBP14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Znf692Q3U381 531 aa14.68□□□□□ -0.06
Topbp1-201ENSMUST00000035164 DekQ7TNV0 380 aaKnown RBP14.67□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Mroh3A0A1D5RM54 893 aa14.67□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Efcab5A0JP43 1406 aa14.66□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Gm7298A0A0N4SVU1 1476 aa14.66□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Slx4Q6P1D7 1565 aa14.66□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Pds5bQ4VA53 1446 aaKnown RBP14.65□□□□□ -0.06
Topbp1-201ENSMUST00000035164 Dhx9O70133 1380 aaKnown RBP14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 AU015836B2RUM3 263 aa14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Htatsf1Q8BGC0 757 aa14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Pcf11G3X9Z4 1553 aa14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 A2mQ6GQT1 1474 aa14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Map3k1P53349 1493 aa14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Plcb2A3KGF7 1181 aa14.64□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Cnga1P29974 684 aa14.63□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Ncoa1P70365 1447 aa14.63□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Ak7Q9D2H2 614 aa14.63□□□□□ -0.07
Topbp1-201ENSMUST00000035164 LrpprcQ6PB66 1392 aaKnown RBP14.62□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Ipo8Q7TMY7 1010 aa14.62□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Rtn4Q99P72 1162 aaKnown RBP14.62□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Slc4a1apE9PX68 744 aa14.62□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Cluap1Q8R3P7 413 aa14.61□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Ercc6F8VPZ5 1481 aa14.59□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Cux1P53564 1515 aa14.59□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Mbd3Q9Z2D8 285 aaKnown RBP14.59□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Ncoa2Q61026 1462 aa14.58□□□□□ -0.07
Topbp1-201ENSMUST00000035164 Mre11Q61216 706 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Fgd1P52734 960 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Ipo4Q8VI75 1082 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Clstn2Q9ER65 966 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Plekhh2Q8C115 1491 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Grin2bQ01097 1482 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Rad54l2Q99NG0 1466 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Ythdc1E9Q5K9 736 aaKnown RBP14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Plekhg5Q66T02 1073 aa14.58□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Dcaf11Q91VU6 549 aa14.56□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Nup155Q99P88 1391 aaKnown RBP14.55□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Trim44Q9QXA7 346 aa14.55□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Ift140E9PY46 1464 aa14.55□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Ankrd26Q811D2 1581 aa14.54□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Ttll5Q8CHB8 1328 aa14.54□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Erbb3Q61526 1339 aa14.54□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Tmf1B9EKI3 1091 aa14.54□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Gm20521D3Z5F7 333 aa14.52□□□□□ -0.08
Topbp1-201ENSMUST00000035164 KarsQ99MN1 595 aaKnown RBP14.52□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Rock1P70335 1354 aa14.52□□□□□ -0.08
Topbp1-201ENSMUST00000035164 Pank1Q8K4K6 548 aa14.52□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Mfap1aC0HKD8 439 aaKnown RBP14.51□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Mfap1bC0HKD9 439 aaKnown RBP14.51□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Zscan10Q3URR7 782 aa14.51□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Senp3Q9EP97 568 aaKnown RBP14.51□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Atp1b4Q99ME6 356 aa14.5□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Golga2Q921M4 999 aa14.5□□□□□ -0.09
Topbp1-201ENSMUST00000035164 Rock2P70336 1388 aa14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms