RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Atp10dQ8K2X1 1416 aa13.22□□□□□ -0.29
Trim42-201ENSMUST00000035026 Mug1P28665 1476 aa13.22□□□□□ -0.29
Trim42-201ENSMUST00000035026 Cdc42bpaQ3UU96 1719 aa13.22□□□□□ -0.29
Trim42-201ENSMUST00000035026 Ifnlr1Q8CGK5 535 aa13.21□□□□□ -0.29
Trim42-201ENSMUST00000035026 Abca8bQ8K440 1620 aa13.21□□□□□ -0.29
Trim42-201ENSMUST00000035026 Prex2Q3LAC4 1598 aa13.21□□□□□ -0.29
Trim42-201ENSMUST00000035026 Kiaa1551Q5DTW7 1521 aa13.21□□□□□ -0.29
Trim42-201ENSMUST00000035026 Gtf3c5Q8R2T8 520 aa13.2□□□□□ -0.3
Trim42-201ENSMUST00000035026 Ttc37F8VPK0 1563 aa13.19□□□□□ -0.3
Trim42-201ENSMUST00000035026 Mapkbp1Q6NS57 1503 aa13.18□□□□□ -0.3
Trim42-201ENSMUST00000035026 Fam163aQ8CAA5 168 aa13.18□□□□□ -0.3
Trim42-201ENSMUST00000035026 Fam208aQ69ZR9 1610 aaKnown RBP13.17□□□□□ -0.3
Trim42-201ENSMUST00000035026 Arid3cA6PWV5 409 aa13.17□□□□□ -0.3
Trim42-201ENSMUST00000035026 Dhx57Q6P5D3 1388 aaKnown RBP13.17□□□□□ -0.3
Trim42-201ENSMUST00000035026 BccipQ9CWI3 316 aa13.16□□□□□ -0.3
Trim42-201ENSMUST00000035026 NexmifQ5DTT1 1515 aa13.15□□□□□ -0.3
Trim42-201ENSMUST00000035026 Pcdh10E9PXQ7 1057 aa13.15□□□□□ -0.3
Trim42-201ENSMUST00000035026 Ppp1r18Q8BQ30 594 aa13.15□□□□□ -0.3
Trim42-201ENSMUST00000035026 1700123L14RikQ3V2K7 440 aa13.15□□□□□ -0.3
Trim42-201ENSMUST00000035026 Depdc5P61460 1591 aa13.14□□□□□ -0.31
Trim42-201ENSMUST00000035026 Lmod2Q3UHZ5 550 aa13.13□□□□□ -0.31
Trim42-201ENSMUST00000035026 AdgbG3UZ78 1657 aa13.13□□□□□ -0.31
Trim42-201ENSMUST00000035026 Zfyve16Q80U44 1528 aa13.12□□□□□ -0.31
Trim42-201ENSMUST00000035026 Pknox2Q8BG99 474 aa13.11□□□□□ -0.31
Trim42-201ENSMUST00000035026 Lmtk2Q3TYD6 1471 aa13.11□□□□□ -0.31
Trim42-201ENSMUST00000035026 AglF8VPN4 1532 aa13.11□□□□□ -0.31
Trim42-201ENSMUST00000035026 Plekhg3Q4VAC9 1341 aa13.1□□□□□ -0.31
Trim42-201ENSMUST00000035026 Rnf17Q99MV7 1640 aa13.09□□□□□ -0.31
Trim42-201ENSMUST00000035026 A2mQ6GQT1 1474 aa13.09□□□□□ -0.31
Trim42-201ENSMUST00000035026 Abca9Q8K449 1623 aa13.05□□□□□ -0.32
Trim42-201ENSMUST00000035026 Mlh3A0A1Y7VMP7 1443 aa13.04□□□□□ -0.32
Trim42-201ENSMUST00000035026 Adcy10Q8C0T9 1614 aa13.04□□□□□ -0.32
Trim42-201ENSMUST00000035026 Ccnb3Q810T2 1396 aa13.03□□□□□ -0.32
Trim42-201ENSMUST00000035026 Arhgap5P97393 1501 aa13.02□□□□□ -0.33
Trim42-201ENSMUST00000035026 Fndc1E9Q043 1732 aa13.01□□□□□ -0.33
Trim42-201ENSMUST00000035026 Gm32742A0A1B0GT42 1604 aa13.01□□□□□ -0.33
Trim42-201ENSMUST00000035026 Pdcd11Q6NS46 1862 aaKnown RBP13□□□□□ -0.33
Trim42-201ENSMUST00000035026 Arhgef40Q3UPH7 1517 aa13□□□□□ -0.33
Trim42-201ENSMUST00000035026 Caskin1Q6P9K8 1431 aa12.99□□□□□ -0.33
Trim42-201ENSMUST00000035026 Neurod1Q60867 357 aa12.99□□□□□ -0.33
Trim42-201ENSMUST00000035026 Kidins220E9Q9B7 1793 aa12.98□□□□□ -0.33
Trim42-201ENSMUST00000035026 Kiaa0556Q8C753 1610 aa12.98□□□□□ -0.33
Trim42-201ENSMUST00000035026 NrdcQ8BHG1 1161 aa12.97□□□□□ -0.33
Trim42-201ENSMUST00000035026 Kdm6bQ5NCY0 1641 aa12.97□□□□□ -0.33
Trim42-201ENSMUST00000035026 Cfap74Q3UY96 1578 aa12.97□□□□□ -0.33
Trim42-201ENSMUST00000035026 Abcc3B2RX12 1523 aa12.97□□□□□ -0.33
Trim42-201ENSMUST00000035026 Tdrd9Q14BI7 1383 aa12.95□□□□□ -0.34
Trim42-201ENSMUST00000035026 Acin1Q9JIX8 1338 aaKnown RBP12.95□□□□□ -0.34
Trim42-201ENSMUST00000035026 Fgd1P52734 960 aa12.95□□□□□ -0.34
Trim42-201ENSMUST00000035026 Trappc8E9PWG2 1437 aa12.94□□□□□ -0.34
Trim42-201ENSMUST00000035026 TimelessQ9R1X4 1197 aa12.94□□□□□ -0.34
Trim42-201ENSMUST00000035026 3425401B19RikD3Z1D3 1412 aa12.92□□□□□ -0.34
Trim42-201ENSMUST00000035026 Hecw2Q6I6G8 1578 aa12.91□□□□□ -0.34
Trim42-201ENSMUST00000035026 Kdm5cP41230 1554 aa12.89□□□□□ -0.35
Trim42-201ENSMUST00000035026 Hecw1Q8K4P8 1604 aa12.89□□□□□ -0.35
Trim42-201ENSMUST00000035026 Cdc42bpbQ7TT50 1713 aa12.89□□□□□ -0.35
Trim42-201ENSMUST00000035026 Cdk11bP24788 784 aaKnown RBP12.88□□□□□ -0.35
Trim42-201ENSMUST00000035026 Synj2Q9D2G5 1434 aa12.88□□□□□ -0.35
Trim42-201ENSMUST00000035026 OvosQ3UU35 1456 aa12.88□□□□□ -0.35
Trim42-201ENSMUST00000035026 Ncapd3Q6ZQK0 1506 aa12.87□□□□□ -0.35
Trim42-201ENSMUST00000035026 Dnajc5gQ8C632 165 aa12.86□□□□□ -0.35
Trim42-201ENSMUST00000035026 Abcc5Q9R1X5 1436 aa12.86□□□□□ -0.35
Trim42-201ENSMUST00000035026 Cul9Q80TT8 1865 aa12.86□□□□□ -0.35
Trim42-201ENSMUST00000035026 Lemd3Q9WU40 921 aa12.85□□□□□ -0.35
Trim42-201ENSMUST00000035026 Dip2cE9PWR4 1557 aa12.84□□□□□ -0.35
Trim42-201ENSMUST00000035026 RereQ80TZ9 1558 aa12.84□□□□□ -0.35
Trim42-201ENSMUST00000035026 Mast1Q9R1L5 1570 aa12.84□□□□□ -0.35
Trim42-201ENSMUST00000035026 Atp10aO54827 1508 aa12.83□□□□□ -0.35
Trim42-201ENSMUST00000035026 Sart1Q9Z315 806 aaKnown RBP12.83□□□□□ -0.36
Trim42-201ENSMUST00000035026 Anks4bQ8K3X6 423 aa12.83□□□□□ -0.36
Trim42-201ENSMUST00000035026 Plekhh2Q8C115 1491 aa12.82□□□□□ -0.36
Trim42-201ENSMUST00000035026 Ptch1Q61115 1434 aa12.82□□□□□ -0.36
Trim42-201ENSMUST00000035026 Neurl4Q5NCX5 1563 aa12.82□□□□□ -0.36
Trim42-201ENSMUST00000035026 UbtfP25976 765 aaKnown RBP12.81□□□□□ -0.36
Trim42-201ENSMUST00000035026 Eif5bQ05D44 1216 aaKnown RBP12.81□□□□□ -0.36
Trim42-201ENSMUST00000035026 Qser1A2BIE1 1698 aa12.81□□□□□ -0.36
Trim42-201ENSMUST00000035026 Alpk3Q924C5 1678 aa12.81□□□□□ -0.36
Trim42-201ENSMUST00000035026 Kif14L0N7N1 1674 aaKnown RBP12.8□□□□□ -0.36
Trim42-201ENSMUST00000035026 SphkapQ6NSW3 1687 aa12.8□□□□□ -0.36
Trim42-201ENSMUST00000035026 Fmn2Q9JL04 1578 aa12.8□□□□□ -0.36
Trim42-201ENSMUST00000035026 Mtus2Q3UHD3 1353 aa12.8□□□□□ -0.36
Trim42-201ENSMUST00000035026 Yeats2Q3TUF7 1407 aa12.8□□□□□ -0.36
Trim42-201ENSMUST00000035026 Znf316Q6PGE4 1016 aa12.79□□□□□ -0.36
Trim42-201ENSMUST00000035026 Ehmt2Q9Z148 1263 aaKnown RBP12.78□□□□□ -0.36
Trim42-201ENSMUST00000035026 Zmym4A2A791 1549 aaKnown RBP12.78□□□□□ -0.36
Trim42-201ENSMUST00000035026 Il16O54824 1322 aa12.77□□□□□ -0.37
Trim42-201ENSMUST00000035026 Naip2Q9QUK4 1447 aa12.77□□□□□ -0.37
Trim42-201ENSMUST00000035026 Xrn1P97789 1719 aaKnown RBP12.76□□□□□ -0.37
Trim42-201ENSMUST00000035026 Nos1Q9Z0J4 1429 aa12.76□□□□□ -0.37
Trim42-201ENSMUST00000035026 Kdm3bQ6ZPY7 1562 aa12.76□□□□□ -0.37
Trim42-201ENSMUST00000035026 Cabp1Q9JLK7 227 aa12.76□□□□□ -0.37
Trim42-201ENSMUST00000035026 Fhod3Q76LL6 1578 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Gm38655A0A286YDK6 273 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Map3k5O35099 1380 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Adgrl2Q8JZZ7 1487 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Cdc42bpgQ80UW5 1551 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Adgrb2Q8CGM1 1561 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Adamtsl3G3UXC7 1706 aa12.75□□□□□ -0.37
Trim42-201ENSMUST00000035026 Trpm1Q2TV84 1622 aa12.74□□□□□ -0.37
Trim42-201ENSMUST00000035026 Rsph4aQ8BYM7 716 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms