RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Sox12Q04890 314 aa15.36■□□□□ 0.05
Trim55-201ENSMUST00000029139 Npm1Q61937 292 aaKnown RBP15.36■□□□□ 0.05
Trim55-201ENSMUST00000029139 Kif20aP97329 887 aa15.35■□□□□ 0.05
Trim55-201ENSMUST00000029139 Chmp4bQ9D8B3 224 aaKnown RBP15.35■□□□□ 0.05
Trim55-201ENSMUST00000029139 Gab3Q8BSM5 595 aa15.34■□□□□ 0.05
Trim55-201ENSMUST00000029139 Hecw2Q6I6G8 1578 aa15.34■□□□□ 0.05
Trim55-201ENSMUST00000029139 Cc2d2bA0A286YDU8 1405 aa15.34■□□□□ 0.05
Trim55-201ENSMUST00000029139 Phf14Q9D4H9 881 aa15.32■□□□□ 0.04
Trim55-201ENSMUST00000029139 Rapgef2Q8CHG7 1496 aa15.32■□□□□ 0.04
Trim55-201ENSMUST00000029139 NclP09405 707 aaKnown RBP15.32■□□□□ 0.04
Trim55-201ENSMUST00000029139 IbspQ61711 324 aa15.31■□□□□ 0.04
Trim55-201ENSMUST00000029139 Synj1Q8CHC4 1574 aa15.31■□□□□ 0.04
Trim55-201ENSMUST00000029139 Pdlim2Q8R1G6 349 aa15.31■□□□□ 0.04
Trim55-201ENSMUST00000029139 Tnnt2P50752 301 aa15.29■□□□□ 0.04
Trim55-201ENSMUST00000029139 Trim26Q99PN3 545 aa15.29■□□□□ 0.04
Trim55-201ENSMUST00000029139 Brwd3A2AHJ4 1799 aa15.28■□□□□ 0.04
Trim55-201ENSMUST00000029139 Samd1D3YXK1 519 aa15.28■□□□□ 0.04
Trim55-201ENSMUST00000029139 Gpatch8A2A6A1 1505 aa15.27■□□□□ 0.03
Trim55-201ENSMUST00000029139 Nup160Q9Z0W3 1402 aaKnown RBP15.27■□□□□ 0.03
Trim55-201ENSMUST00000029139 Dhx30Q99PU8 1217 aaKnown RBP15.26■□□□□ 0.03
Trim55-201ENSMUST00000029139 Slc4a3P16283 1227 aa15.25■□□□□ 0.03
Trim55-201ENSMUST00000029139 Fgd6Q69ZL1 1399 aa15.24■□□□□ 0.03
Trim55-201ENSMUST00000029139 Golga3P55937 1487 aa15.24■□□□□ 0.03
Trim55-201ENSMUST00000029139 Rrp12Q6P5B0 1295 aaKnown RBP15.22■□□□□ 0.03
Trim55-201ENSMUST00000029139 Tmem132aQ922P8 1018 aa15.22■□□□□ 0.03
Trim55-201ENSMUST00000029139 Clasp1Q80TV8 1535 aaKnown RBP15.21■□□□□ 0.03
Trim55-201ENSMUST00000029139 Irf5P56477 497 aa15.21■□□□□ 0.03
Trim55-201ENSMUST00000029139 Ncbp3Q8BZR9 615 aaKnown RBP15.21■□□□□ 0.02
Trim55-201ENSMUST00000029139 BbxQ8VBW5 907 aa15.21■□□□□ 0.02
Trim55-201ENSMUST00000029139 CadpsQ80TJ1 1355 aa15.2■□□□□ 0.02
Trim55-201ENSMUST00000029139 AcrbpQ3V140 540 aa15.2■□□□□ 0.02
Trim55-201ENSMUST00000029139 Mre11Q61216 706 aa15.2■□□□□ 0.02
Trim55-201ENSMUST00000029139 GapdhsQ64467 440 aa15.2■□□□□ 0.02
Trim55-201ENSMUST00000029139 Tpm2P58774 284 aa15.19■□□□□ 0.02
Trim55-201ENSMUST00000029139 LrpprcQ6PB66 1392 aaKnown RBP15.19■□□□□ 0.02
Trim55-201ENSMUST00000029139 Ttc37F8VPK0 1563 aa15.19■□□□□ 0.02
Trim55-201ENSMUST00000029139 Brd4Q9ESU6 1400 aaKnown RBP15.18■□□□□ 0.02
Trim55-201ENSMUST00000029139 Paxip1Q6NZQ4 1056 aa15.17■□□□□ 0.02
Trim55-201ENSMUST00000029139 Arhgap27A2AB59 869 aa15.16■□□□□ 0.02
Trim55-201ENSMUST00000029139 Setd1bQ8CFT2 1985 aa15.16■□□□□ 0.02
Trim55-201ENSMUST00000029139 Disp1Q3TDN0 1521 aa15.16■□□□□ 0.02
Trim55-201ENSMUST00000029139 Mapkbp1Q6NS57 1503 aa15.16■□□□□ 0.02
Trim55-201ENSMUST00000029139 PogkQ80TC5 607 aa15.16■□□□□ 0.02
Trim55-201ENSMUST00000029139 Abcc1O35379 1528 aa15.16■□□□□ 0.02
Trim55-201ENSMUST00000029139 Lekr1B2RVN1 116 aa15.15■□□□□ 0.02
Trim55-201ENSMUST00000029139 Chd1P40201 1711 aa15.15■□□□□ 0.02
Trim55-201ENSMUST00000029139 Ak9G3UYQ4 1894 aa15.15■□□□□ 0.02
Trim55-201ENSMUST00000029139 EspnQ9ET47 871 aa15.15■□□□□ 0.02
Trim55-201ENSMUST00000029139 Ccdc18Q640L5 1455 aa15.14■□□□□ 0.01
Trim55-201ENSMUST00000029139 Slc24a1Q91WD8 1130 aa15.14■□□□□ 0.01
Trim55-201ENSMUST00000029139 AqrQ8CFQ3 1481 aaKnown RBP15.13■□□□□ 0.01
Trim55-201ENSMUST00000029139 Mroh3A0A1D5RM54 893 aa15.13■□□□□ 0.01
Trim55-201ENSMUST00000029139 Sart3Q9JLI8 962 aaKnown RBP15.13■□□□□ 0.01
Trim55-201ENSMUST00000029139 CanxP35564 591 aaKnown RBP15.12■□□□□ 0.01
Trim55-201ENSMUST00000029139 Smg6P61406 1418 aaKnown RBP15.12■□□□□ 0.01
Trim55-201ENSMUST00000029139 Nkx1-2P42580 305 aa15.12■□□□□ 0.01
Trim55-201ENSMUST00000029139 Clcn1Q64347 994 aa15.12■□□□□ 0.01
Trim55-201ENSMUST00000029139 Q8BT18 775 aa15.12■□□□□ 0.01
Trim55-201ENSMUST00000029139 Chic1Q8CBW7 227 aa15.12■□□□□ 0.01
Trim55-201ENSMUST00000029139 Cyb5rlB1AS42 316 aa15.11■□□□□ 0.01
Trim55-201ENSMUST00000029139 Brd2Q7JJ13 798 aaKnown RBP15.1■□□□□ 0.01
Trim55-201ENSMUST00000029139 Neo1P97798 1493 aa15.1■□□□□ 0.01
Trim55-201ENSMUST00000029139 TnnQ80Z71 1560 aa15.1■□□□□ 0.01
Trim55-201ENSMUST00000029139 Ythdc2B2RR83 1445 aaKnown RBP15.09■□□□□ 0.01
Trim55-201ENSMUST00000029139 PogzQ8BZH4 1409 aaKnown RBP15.09■□□□□ 0.01
Trim55-201ENSMUST00000029139 Plcd3Q8K2J0 785 aa15.09■□□□□ 0.01
Trim55-201ENSMUST00000029139 Ncapd3Q6ZQK0 1506 aa15.09■□□□□ 0.01
Trim55-201ENSMUST00000029139 Dnajc14Q921R4 703 aa15.08■□□□□ 0
Trim55-201ENSMUST00000029139 AI481877A2ALV5 1481 aa15.08■□□□□ 0
Trim55-201ENSMUST00000029139 Zbtb7cQ8VCZ7 619 aa15.05■□□□□ 0
Trim55-201ENSMUST00000029139 Fbxo2Q80UW2 297 aa15.04■□□□□ -0
Trim55-201ENSMUST00000029139 P3h3Q8CG70 732 aa15.04■□□□□ -0
Trim55-201ENSMUST00000029139 Top2aQ01320 1528 aaKnown RBP15.03■□□□□ -0
Trim55-201ENSMUST00000029139 Arid4aF8VPQ2 1261 aaKnown RBP15.02■□□□□ -0
Trim55-201ENSMUST00000029139 4930567H17RikQ3V0K5 233 aa15.02■□□□□ -0
Trim55-201ENSMUST00000029139 Dnai1Q8C0M8 701 aa15.02□□□□□ -0.01
Trim55-201ENSMUST00000029139 Camsap1A2AHC3 1581 aa15.01□□□□□ -0.01
Trim55-201ENSMUST00000029139 Eid3Q3V124 375 aa15.01□□□□□ -0.01
Trim55-201ENSMUST00000029139 Arid4bA2CG63 1314 aaKnown RBP14.99□□□□□ -0.01
Trim55-201ENSMUST00000029139 Stac3Q8BZ71 360 aa14.99□□□□□ -0.01
Trim55-201ENSMUST00000029139 Podxl2Q8CAE9 603 aa14.98□□□□□ -0.01
Trim55-201ENSMUST00000029139 Gm13697A2AK42 830 aa14.98□□□□□ -0.01
Trim55-201ENSMUST00000029139 Ddrgk1Q80WW9 315 aa14.98□□□□□ -0.01
Trim55-201ENSMUST00000029139 Arhgef12Q8R4H2 1543 aaKnown RBP14.98□□□□□ -0.01
Trim55-201ENSMUST00000029139 Chrm1P12657 460 aa14.96□□□□□ -0.01
Trim55-201ENSMUST00000029139 Ppp1r18Q8BQ30 594 aa14.94□□□□□ -0.02
Trim55-201ENSMUST00000029139 Ripk4Q9ERK0 786 aa14.94□□□□□ -0.02
Trim55-201ENSMUST00000029139 Pdia4P08003 638 aaKnown RBP14.93□□□□□ -0.02
Trim55-201ENSMUST00000029139 Aebp1Q640N1 1128 aa14.93□□□□□ -0.02
Trim55-201ENSMUST00000029139 Efcab5A0JP43 1406 aa14.93□□□□□ -0.02
Trim55-201ENSMUST00000029139 Htatsf1Q8BGC0 757 aa14.93□□□□□ -0.02
Trim55-201ENSMUST00000029139 Mink1Q9JM52 1308 aa14.93□□□□□ -0.02
Trim55-201ENSMUST00000029139 Ppm1gQ61074 542 aa14.92□□□□□ -0.02
Trim55-201ENSMUST00000029139 Speer4f1Q9D5Q6 258 aa14.92□□□□□ -0.02
Trim55-201ENSMUST00000029139 Gys2Q8VCB3 704 aa14.91□□□□□ -0.02
Trim55-201ENSMUST00000029139 Sin3aQ60520 1274 aaKnown RBP14.9□□□□□ -0.02
Trim55-201ENSMUST00000029139 Kcnh8P59111 1102 aa14.9□□□□□ -0.02
Trim55-201ENSMUST00000029139 Kdm5bQ80Y84 1544 aa14.9□□□□□ -0.02
Trim55-201ENSMUST00000029139 Duox2A2AQ99 1517 aa14.89□□□□□ -0.03
Trim55-201ENSMUST00000029139 Zfyve16Q80U44 1528 aa14.89□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms