RNA–Protein interactions for RNA: ENSMUST00000028752.7

Vps39-201, Transcript of Vam6/Vps39-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps39, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-201ENSMUST00000028752 Ddrgk1Q80WW9 315 aa12.02□□□□□ -0.49
Vps39-201ENSMUST00000028752 Slc4a2P13808 1237 aaKnown RBP12.01□□□□□ -0.49
Vps39-201ENSMUST00000028752 Speer4f1Q9D5Q6 258 aa12.01□□□□□ -0.49
Vps39-201ENSMUST00000028752 Eif2s2Q99L45 331 aaKnown RBP12.01□□□□□ -0.49
Vps39-201ENSMUST00000028752 Fyco1Q8VDC1 1437 aa12□□□□□ -0.49
Vps39-201ENSMUST00000028752 IbspQ61711 324 aa12□□□□□ -0.49
Vps39-201ENSMUST00000028752 Ncapd3Q6ZQK0 1506 aa11.99□□□□□ -0.49
Vps39-201ENSMUST00000028752 Kif15Q6P9L6 1387 aa11.99□□□□□ -0.49
Vps39-201ENSMUST00000028752 Ttll13A4Q9F6 804 aa11.98□□□□□ -0.49
Vps39-201ENSMUST00000028752 Rrp9Q91WM3 475 aaKnown RBP11.98□□□□□ -0.49
Vps39-201ENSMUST00000028752 Kcnh8P59111 1102 aa11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 MsnP26041 577 aaKnown RBP11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 CrbnQ8C7D2 445 aa11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 Gtf2a1Q99PM3 378 aa11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 VgfQ0VGU4 617 aa11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 Prkrip1Q9CWV6 186 aaKnown RBP11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 Atp1b4Q99ME6 356 aa11.97□□□□□ -0.49
Vps39-201ENSMUST00000028752 Mfap1aC0HKD8 439 aaKnown RBP11.96□□□□□ -0.49
Vps39-201ENSMUST00000028752 Mfap1bC0HKD9 439 aaKnown RBP11.96□□□□□ -0.49
Vps39-201ENSMUST00000028752 Kdm2aP59997 1161 aa11.96□□□□□ -0.49
Vps39-201ENSMUST00000028752 Ak7Q9D2H2 614 aa11.95□□□□□ -0.5
Vps39-201ENSMUST00000028752 Cecr2E9Q2Z1 1453 aa11.95□□□□□ -0.5
Vps39-201ENSMUST00000028752 CftrP26361 1476 aa11.95□□□□□ -0.5
Vps39-201ENSMUST00000028752 Znf692Q3U381 531 aa11.95□□□□□ -0.5
Vps39-201ENSMUST00000028752 Mtus2Q3UHD3 1353 aa11.95□□□□□ -0.5
Vps39-201ENSMUST00000028752 Crybg2B7ZCC2 1516 aa11.94□□□□□ -0.5
Vps39-201ENSMUST00000028752 KnstrnQ9D9Z1 312 aaKnown RBP11.93□□□□□ -0.5
Vps39-201ENSMUST00000028752 Cluap1Q8R3P7 413 aa11.93□□□□□ -0.5
Vps39-201ENSMUST00000028752 Casc1Q6TDU8 730 aa11.92□□□□□ -0.5
Vps39-201ENSMUST00000028752 Cabp1Q9JLK7 227 aa11.92□□□□□ -0.5
Vps39-201ENSMUST00000028752 Liat1Q810M6 228 aa11.92□□□□□ -0.5
Vps39-201ENSMUST00000028752 Synj1Q8CHC4 1574 aa11.92□□□□□ -0.5
Vps39-201ENSMUST00000028752 Aebp1Q640N1 1128 aa11.92□□□□□ -0.5
Vps39-201ENSMUST00000028752 Mroh3A0A1D5RM54 893 aa11.91□□□□□ -0.5
Vps39-201ENSMUST00000028752 PnisrA2AJT4 805 aaKnown RBP11.91□□□□□ -0.5
Vps39-201ENSMUST00000028752 Ankrd36D3Z4K0 1415 aa11.91□□□□□ -0.5
Vps39-201ENSMUST00000028752 Fbxo2Q80UW2 297 aa11.9□□□□□ -0.5
Vps39-201ENSMUST00000028752 Usp47Q8BY87 1376 aa11.9□□□□□ -0.51
Vps39-201ENSMUST00000028752 Becn1O88597 448 aa11.89□□□□□ -0.51
Vps39-201ENSMUST00000028752 Znf316Q6PGE4 1016 aa11.89□□□□□ -0.51
Vps39-201ENSMUST00000028752 Adam1bQ8R534 806 aa11.89□□□□□ -0.51
Vps39-201ENSMUST00000028752 Ush1cQ9ES64 910 aa11.89□□□□□ -0.51
Vps39-201ENSMUST00000028752 Arhgap27A2AB59 869 aa11.89□□□□□ -0.51
Vps39-201ENSMUST00000028752 Trak1Q6PD31 939 aa11.88□□□□□ -0.51
Vps39-201ENSMUST00000028752 Ubl4bQ9CQ84 188 aa11.88□□□□□ -0.51
Vps39-201ENSMUST00000028752 UacaQ8CGB3 1411 aa11.88□□□□□ -0.51
Vps39-201ENSMUST00000028752 Tmf1B9EKI3 1091 aa11.86□□□□□ -0.51
Vps39-201ENSMUST00000028752 Phf14Q9D4H9 881 aa11.85□□□□□ -0.51
Vps39-201ENSMUST00000028752 GorabQ8BRM2 368 aa11.85□□□□□ -0.51
Vps39-201ENSMUST00000028752 Golga2Q921M4 999 aa11.85□□□□□ -0.51
Vps39-201ENSMUST00000028752 Rpgrip1lQ8CG73 1264 aa11.84□□□□□ -0.51
Vps39-201ENSMUST00000028752 Gm20521D3Z5F7 333 aa11.84□□□□□ -0.51
Vps39-201ENSMUST00000028752 Rsph3aQ3UFY4 516 aa11.84□□□□□ -0.51
Vps39-201ENSMUST00000028752 Ccdc183A2AJB1 534 aa11.83□□□□□ -0.52
Vps39-201ENSMUST00000028752 Esx1O88933 382 aa11.83□□□□□ -0.52
Vps39-201ENSMUST00000028752 L3mbtl2P59178 703 aa11.83□□□□□ -0.52
Vps39-201ENSMUST00000028752 Map4P27546 1125 aaKnown RBP11.82□□□□□ -0.52
Vps39-201ENSMUST00000028752 PtmsQ9D0J8 101 aaKnown RBP11.82□□□□□ -0.52
Vps39-201ENSMUST00000028752 Ylpm1Q9R0I7 1386 aaKnown RBP11.82□□□□□ -0.52
Vps39-201ENSMUST00000028752 Kif27Q7M6Z4 1394 aa11.81□□□□□ -0.52
Vps39-201ENSMUST00000028752 Zfp444Q3TDV8 331 aaKnown RBP11.81□□□□□ -0.52
Vps39-201ENSMUST00000028752 Chmp4bQ9D8B3 224 aaKnown RBP11.81□□□□□ -0.52
Vps39-201ENSMUST00000028752 DmtnQ9WV69 405 aa11.81□□□□□ -0.52
Vps39-201ENSMUST00000028752 Rfx1P48377 963 aa11.81□□□□□ -0.52
Vps39-201ENSMUST00000028752 Rock1P70335 1354 aa11.81□□□□□ -0.52
Vps39-201ENSMUST00000028752 Rabep1O35551 862 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Rock2P70336 1388 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Ifit1bl1D3Z6F0 470 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Cnga1P29974 684 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Kiaa0754Q69ZZ9 979 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Paxip1Q6NZQ4 1056 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Tpm2P58774 284 aa11.8□□□□□ -0.52
Vps39-201ENSMUST00000028752 Srpk2O54781 681 aaKnown RBP11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Pank3Q8R2W9 370 aa11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 KarsQ99MN1 595 aaKnown RBP11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Rrp7aQ9D1C9 280 aaKnown RBP11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Pcmtd1P59913 357 aa11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Znf330Q922H9 316 aa11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Gpatch11Q3UFS4 262 aa11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Rbm10Q99KG3 930 aaKnown RBP11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Dapk1Q80YE7 1442 aa11.79□□□□□ -0.52
Vps39-201ENSMUST00000028752 Ccnb3Q810T2 1396 aa11.78□□□□□ -0.52
Vps39-201ENSMUST00000028752 Inpp5dQ9ES52 1191 aa11.77□□□□□ -0.53
Vps39-201ENSMUST00000028752 Egfem1Q8C088 590 aa11.77□□□□□ -0.53
Vps39-201ENSMUST00000028752 Dcaf11Q91VU6 549 aa11.77□□□□□ -0.53
Vps39-201ENSMUST00000028752 Slc4a1apE9PX68 744 aa11.77□□□□□ -0.53
Vps39-201ENSMUST00000028752 Ksr2Q3UVC0 959 aa11.77□□□□□ -0.53
Vps39-201ENSMUST00000028752 Tnpo1Q8BFY9 898 aaKnown RBP11.76□□□□□ -0.53
Vps39-201ENSMUST00000028752 Hsp90b1P08113 802 aaKnown RBP11.76□□□□□ -0.53
Vps39-201ENSMUST00000028752 Vps8Q0P5W1 1427 aa11.76□□□□□ -0.53
Vps39-201ENSMUST00000028752 Gm973E9Q295 1059 aa11.75□□□□□ -0.53
Vps39-201ENSMUST00000028752 Trim30aP15533 496 aa11.75□□□□□ -0.53
Vps39-201ENSMUST00000028752 Tmco5bQ80X59 307 aa11.75□□□□□ -0.53
Vps39-201ENSMUST00000028752 Arap1Q4LDD4 1452 aa11.75□□□□□ -0.53
Vps39-201ENSMUST00000028752 Q7TT23 1179 aa11.74□□□□□ -0.53
Vps39-201ENSMUST00000028752 Kif20aP97329 887 aa11.74□□□□□ -0.53
Vps39-201ENSMUST00000028752 Kif16bB1AVY7 1312 aa11.74□□□□□ -0.53
Vps39-201ENSMUST00000028752 Sycp2Q9CUU3 1500 aa11.74□□□□□ -0.53
Vps39-201ENSMUST00000028752 U2af1Q9D883 239 aaKnown RBP11.73□□□□□ -0.53
Vps39-201ENSMUST00000028752 Naip1Q9QWK5 1403 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms