RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Rrp7aQ9D1C9 280 aaKnown RBP11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Nup155Q99P88 1391 aaKnown RBP11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Arhgap31A6X8Z5 1425 aa11.54□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Card11Q8CIS0 1159 aa11.53□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Usp47Q8BY87 1376 aa11.53□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Ifnlr1Q8CGK5 535 aa11.53□□□□□ -0.56
Sf3b1-201ENSMUST00000027127 Kif21aQ9QXL2 1672 aa11.52□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 NeflP08551 543 aa11.51□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Ccdc141E9Q8Q6 1531 aa11.51□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Erich6D3Z6S9 713 aa11.5□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Trak1Q6PD31 939 aa11.5□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Magi3Q9EQJ9 1476 aa11.49□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Lmtk2Q3TYD6 1471 aa11.49□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Fgd6Q69ZL1 1399 aa11.49□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Calr4Q3TQS0 420 aa11.48□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Camsap2Q8C1B1 1461 aa11.47□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Tdrd9Q14BI7 1383 aa11.47□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Gm13695A2AK44 830 aa11.47□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Sin3aQ60520 1274 aaKnown RBP11.47□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Pbrm1Q8BSQ9 1634 aaKnown RBP11.47□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Rock2P70336 1388 aa11.46□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Rtl5Q5DTT4 599 aa11.46□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Nup160Q9Z0W3 1402 aaKnown RBP11.46□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Abca5Q8K448 1642 aa11.46□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Magi1Q6RHR9 1471 aa11.46□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Abcc5Q9R1X5 1436 aa11.46□□□□□ -0.57
Sf3b1-201ENSMUST00000027127 Upf2A2AT37 1269 aaKnown RBP11.46□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Smg6P61406 1418 aaKnown RBP11.46□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Mlh3A0A1Y7VMP7 1443 aa11.45□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Rundc1Q0VDN7 615 aa11.45□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Grwd1Q810D6 446 aaKnown RBP11.45□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 WizO88286 1684 aaKnown RBP11.45□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Caskin1Q6P9K8 1431 aa11.44□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Kdm5bQ80Y84 1544 aa11.44□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 1700123L14RikQ3V2K7 440 aa11.44□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 BC005561E9Q5E2 1589 aa11.43□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 PxdnQ3UQ28 1475 aa11.43□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Mroh3A0A1D5RM54 893 aa11.43□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Arid4bA2CG63 1314 aaKnown RBP11.43□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Rapgef6Q5NCJ1 1609 aa11.42□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Sart1Q9Z315 806 aaKnown RBP11.42□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Ncoa3O09000 1398 aa11.41□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Adamts12Q811B3 1600 aa11.41□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Naip5Q9R016 1403 aa11.4□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Dnajc5bQ9CQ94 199 aa11.4□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 DroshaQ5HZJ0 1373 aaKnown RBP11.4□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Shroom2A2ALU4 1481 aa11.4□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Prdm16A2A935 1275 aa11.4□□□□□ -0.58
Sf3b1-201ENSMUST00000027127 Gm14025A2AP89 1413 aa11.39□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Zbtb4Q5F293 982 aa11.39□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Zfp644E9QA22 1323 aa11.38□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Dapk1Q80YE7 1442 aa11.37□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Nlrp6Q91WS2 869 aa11.37□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Lemd3Q9WU40 921 aa11.36□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Gcc2Q8CHG3 1679 aa11.36□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Neo1P97798 1493 aa11.36□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Rprd2Q6NXI6 1469 aaKnown RBP11.36□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Arhgap5P97393 1501 aa11.36□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Spag9Q58A65 1321 aaKnown RBP11.35□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Ttll5Q8CHB8 1328 aa11.35□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Ofd1Q80Z25 1017 aa11.34□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Fancd2Q80V62 1450 aa11.34□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Exoc6Q8R313 802 aa11.34□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Pik3c2gO70167 1506 aa11.34□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Nsd2Q8BVE8 1365 aa11.33□□□□□ -0.59
Sf3b1-201ENSMUST00000027127 Wwc2Q6NXJ0 1187 aa11.33□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Srpk2O54781 681 aaKnown RBP11.33□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Wdr43Q6ZQL4 677 aaKnown RBP11.33□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 4933416C03RikQ3V063 378 aa11.32□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Myom3A2ABU4 1439 aa11.32□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Gm38655A0A286YDK6 273 aa11.32□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Ifit1bl1D3Z6F0 470 aa11.31□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Gm20521D3Z5F7 333 aa11.31□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Plekhg5Q66T02 1073 aa11.3□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Stard8Q8K031 1019 aa11.3□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Kdm2aP59997 1161 aa11.29□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Cd109Q8R422 1442 aa11.29□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Igf1rQ60751 1373 aa11.29□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Rusc2Q80U22 1514 aa11.29□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Dhx9O70133 1380 aaKnown RBP11.29□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Arhgef12Q8R4H2 1543 aaKnown RBP11.28□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Kdm3bQ6ZPY7 1562 aa11.28□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Fhod3Q76LL6 1578 aa11.28□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Tmf1B9EKI3 1091 aa11.28□□□□□ -0.6
Sf3b1-201ENSMUST00000027127 Mapkbp1Q6NS57 1503 aa11.27□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Ppp4r2Q0VGB7 417 aa11.27□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Arhgef11Q68FM7 1552 aa11.27□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Ncoa1P70365 1447 aa11.27□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Adcy10Q8C0T9 1614 aa11.26□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Kif3bQ61771 747 aa11.26□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 IqubQ8CDK3 788 aa11.26□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Znf710Q3U288 666 aa11.26□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Atp1b4Q99ME6 356 aa11.26□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Arhgef40Q3UPH7 1517 aa11.26□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Pde4cQ3UEI1 686 aa11.25□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Abca16E9PWJ7 1678 aa11.25□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Ttbk1Q6PCN3 1308 aa11.25□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Arid3cA6PWV5 409 aa11.25□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Zscan21Q07231 555 aa11.25□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Stk24Q99KH8 431 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 77.7 ms