RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 Vsig10D3YX43 558 aa13.58□□□□□ -0.24
Traf3-201ENSMUST00000021706 NgefQ8CHT1 710 aa13.58□□□□□ -0.24
Traf3-201ENSMUST00000021706 Exosc9Q9JHI7 438 aaKnown RBP13.57□□□□□ -0.24
Traf3-201ENSMUST00000021706 Stag3O70576 1240 aa13.56□□□□□ -0.24
Traf3-201ENSMUST00000021706 Mroh2bQ7M6Y6 1581 aa13.56□□□□□ -0.24
Traf3-201ENSMUST00000021706 PogzQ8BZH4 1409 aaKnown RBP13.55□□□□□ -0.24
Traf3-201ENSMUST00000021706 CanxP35564 591 aaKnown RBP13.54□□□□□ -0.24
Traf3-201ENSMUST00000021706 IqubQ8CDK3 788 aa13.54□□□□□ -0.24
Traf3-201ENSMUST00000021706 Dnajc5bQ9CQ94 199 aa13.53□□□□□ -0.24
Traf3-201ENSMUST00000021706 Zfp644E9QA22 1323 aa13.53□□□□□ -0.24
Traf3-201ENSMUST00000021706 Camsap1A2AHC3 1581 aa13.53□□□□□ -0.24
Traf3-201ENSMUST00000021706 Plekhh2Q8C115 1491 aa13.53□□□□□ -0.24
Traf3-201ENSMUST00000021706 Urb2E9Q7L1 1524 aaKnown RBP13.52□□□□□ -0.24
Traf3-201ENSMUST00000021706 Stk26Q99JT2 416 aa13.52□□□□□ -0.25
Traf3-201ENSMUST00000021706 Senp3Q9EP97 568 aaKnown RBP13.51□□□□□ -0.25
Traf3-201ENSMUST00000021706 Ncapd3Q6ZQK0 1506 aa13.51□□□□□ -0.25
Traf3-201ENSMUST00000021706 Arhgef5E9Q7D5 1581 aa13.5□□□□□ -0.25
Traf3-201ENSMUST00000021706 Ccdc9Q8VC31 543 aaKnown RBP13.5□□□□□ -0.25
Traf3-201ENSMUST00000021706 Sart1Q9Z315 806 aaKnown RBP13.5□□□□□ -0.25
Traf3-201ENSMUST00000021706 Nup155Q99P88 1391 aaKnown RBP13.49□□□□□ -0.25
Traf3-201ENSMUST00000021706 Hsp90ab1P11499 724 aaKnown RBP13.49□□□□□ -0.25
Traf3-201ENSMUST00000021706 Tdrd9Q14BI7 1383 aa13.48□□□□□ -0.25
Traf3-201ENSMUST00000021706 Gm6268A2A3U9 297 aa13.48□□□□□ -0.25
Traf3-201ENSMUST00000021706 Plin1Q8CGN5 517 aa13.48□□□□□ -0.25
Traf3-201ENSMUST00000021706 Fgd1P52734 960 aa13.47□□□□□ -0.25
Traf3-201ENSMUST00000021706 Usp47Q8BY87 1376 aa13.47□□□□□ -0.25
Traf3-201ENSMUST00000021706 1700019A02RikA0A087WPV9 146 aa13.47□□□□□ -0.25
Traf3-201ENSMUST00000021706 Map3k1P53349 1493 aa13.47□□□□□ -0.25
Traf3-201ENSMUST00000021706 Lamc3Q9R0B6 1581 aa13.46□□□□□ -0.25
Traf3-201ENSMUST00000021706 DekQ7TNV0 380 aaKnown RBP13.45□□□□□ -0.26
Traf3-201ENSMUST00000021706 UacaQ8CGB3 1411 aa13.45□□□□□ -0.26
Traf3-201ENSMUST00000021706 Cc2d2bA0A286YDU8 1405 aa13.44□□□□□ -0.26
Traf3-201ENSMUST00000021706 Jph4Q80WT0 628 aa13.44□□□□□ -0.26
Traf3-201ENSMUST00000021706 AqrQ8CFQ3 1481 aaKnown RBP13.43□□□□□ -0.26
Traf3-201ENSMUST00000021706 Kif3bQ61771 747 aa13.43□□□□□ -0.26
Traf3-201ENSMUST00000021706 Supt16hQ920B9 1047 aa13.43□□□□□ -0.26
Traf3-201ENSMUST00000021706 Speer4f1Q9D5Q6 258 aa13.43□□□□□ -0.26
Traf3-201ENSMUST00000021706 Dhx57Q6P5D3 1388 aaKnown RBP13.43□□□□□ -0.26
Traf3-201ENSMUST00000021706 Mrc2Q64449 1479 aa13.42□□□□□ -0.26
Traf3-201ENSMUST00000021706 Ppp1r18Q8BQ30 594 aa13.42□□□□□ -0.26
Traf3-201ENSMUST00000021706 Plb1Q3TTY0 1478 aa13.42□□□□□ -0.26
Traf3-201ENSMUST00000021706 Gm7298A0A0N4SVU1 1476 aa13.42□□□□□ -0.26
Traf3-201ENSMUST00000021706 CrbnQ8C7D2 445 aa13.42□□□□□ -0.26
Traf3-201ENSMUST00000021706 MyclP10166 368 aa13.42□□□□□ -0.26
Traf3-201ENSMUST00000021706 Lemd3Q9WU40 921 aa13.41□□□□□ -0.26
Traf3-201ENSMUST00000021706 Tiam1Q60610 1591 aa13.41□□□□□ -0.26
Traf3-201ENSMUST00000021706 Dcaf11Q91VU6 549 aa13.41□□□□□ -0.26
Traf3-201ENSMUST00000021706 Mapk8ip3Q9ESN9 1337 aa13.4□□□□□ -0.26
Traf3-201ENSMUST00000021706 Fhad1A6PWD2 1420 aa13.4□□□□□ -0.26
Traf3-201ENSMUST00000021706 Znf316Q6PGE4 1016 aa13.4□□□□□ -0.26
Traf3-201ENSMUST00000021706 EprsQ8CGC7 1512 aaKnown RBP13.39□□□□□ -0.27
Traf3-201ENSMUST00000021706 Nolc1E9Q5C9 702 aaKnown RBP13.39□□□□□ -0.27
Traf3-201ENSMUST00000021706 Gtf2e1Q9D0D5 440 aa13.39□□□□□ -0.27
Traf3-201ENSMUST00000021706 CadpsQ80TJ1 1355 aa13.38□□□□□ -0.27
Traf3-201ENSMUST00000021706 Hsp90aa1P07901 733 aaKnown RBP13.38□□□□□ -0.27
Traf3-201ENSMUST00000021706 Slc4a1apE9PX68 744 aa13.38□□□□□ -0.27
Traf3-201ENSMUST00000021706 Polr1aO35134 1717 aaKnown RBP13.38□□□□□ -0.27
Traf3-201ENSMUST00000021706 Zscan21Q07231 555 aa13.37□□□□□ -0.27
Traf3-201ENSMUST00000021706 Spryd3E9Q9B3 442 aa13.37□□□□□ -0.27
Traf3-201ENSMUST00000021706 Fan1Q69ZT1 1020 aa13.37□□□□□ -0.27
Traf3-201ENSMUST00000021706 Cux1P53564 1515 aa13.37□□□□□ -0.27
Traf3-201ENSMUST00000021706 Tmf1B9EKI3 1091 aa13.36□□□□□ -0.27
Traf3-201ENSMUST00000021706 Arhgap31A6X8Z5 1425 aa13.35□□□□□ -0.27
Traf3-201ENSMUST00000021706 Pcf11G3X9Z4 1553 aa13.35□□□□□ -0.27
Traf3-201ENSMUST00000021706 Soga1E1U8D0 1418 aa13.35□□□□□ -0.27
Traf3-201ENSMUST00000021706 Rock2P70336 1388 aa13.35□□□□□ -0.27
Traf3-201ENSMUST00000021706 Vps8Q0P5W1 1427 aa13.34□□□□□ -0.27
Traf3-201ENSMUST00000021706 Rwdd1Q9CQK7 243 aa13.34□□□□□ -0.27
Traf3-201ENSMUST00000021706 Srcin1Q9QWI6 1250 aa13.34□□□□□ -0.27
Traf3-201ENSMUST00000021706 Znf330Q922H9 316 aa13.34□□□□□ -0.27
Traf3-201ENSMUST00000021706 Bcl11aQ9QYE3 773 aa13.34□□□□□ -0.27
Traf3-201ENSMUST00000021706 Pank3Q8R2W9 370 aa13.33□□□□□ -0.28
Traf3-201ENSMUST00000021706 Smg6P61406 1418 aaKnown RBP13.33□□□□□ -0.28
Traf3-201ENSMUST00000021706 Inpp5dQ9ES52 1191 aa13.32□□□□□ -0.28
Traf3-201ENSMUST00000021706 Mak16Q8BGS0 296 aaKnown RBP13.32□□□□□ -0.28
Traf3-201ENSMUST00000021706 U2af1Q9D883 239 aaKnown RBP13.32□□□□□ -0.28
Traf3-201ENSMUST00000021706 Birc3O08863 600 aa13.31□□□□□ -0.28
Traf3-201ENSMUST00000021706 Ythdc1E9Q5K9 736 aaKnown RBP13.31□□□□□ -0.28
Traf3-201ENSMUST00000021706 U2surpQ6NV83 1029 aaKnown RBP13.31□□□□□ -0.28
Traf3-201ENSMUST00000021706 Tcerg1Q8CGF7 1100 aaKnown RBP13.3□□□□□ -0.28
Traf3-201ENSMUST00000021706 Cluap1Q8R3P7 413 aa13.3□□□□□ -0.28
Traf3-201ENSMUST00000021706 Crocc2F6XLV1 1638 aa13.3□□□□□ -0.28
Traf3-201ENSMUST00000021706 SynmQ70IV5 1561 aa13.3□□□□□ -0.28
Traf3-201ENSMUST00000021706 Spag9Q58A65 1321 aaKnown RBP13.3□□□□□ -0.28
Traf3-201ENSMUST00000021706 Ankrd36D3Z4K0 1415 aa13.29□□□□□ -0.28
Traf3-201ENSMUST00000021706 Rtn4Q99P72 1162 aaKnown RBP13.29□□□□□ -0.28
Traf3-201ENSMUST00000021706 Sox12Q04890 314 aa13.29□□□□□ -0.28
Traf3-201ENSMUST00000021706 Ift140E9PY46 1464 aa13.28□□□□□ -0.28
Traf3-201ENSMUST00000021706 Tmco5bQ80X59 307 aa13.28□□□□□ -0.28
Traf3-201ENSMUST00000021706 Chmp5Q9D7S9 219 aa13.28□□□□□ -0.28
Traf3-201ENSMUST00000021706 Golga2Q921M4 999 aa13.27□□□□□ -0.29
Traf3-201ENSMUST00000021706 Ncoa2Q61026 1462 aa13.27□□□□□ -0.29
Traf3-201ENSMUST00000021706 Dapk1Q80YE7 1442 aa13.27□□□□□ -0.29
Traf3-201ENSMUST00000021706 Ankrd26Q811D2 1581 aa13.27□□□□□ -0.29
Traf3-201ENSMUST00000021706 Slx4Q6P1D7 1565 aa13.26□□□□□ -0.29
Traf3-201ENSMUST00000021706 Plcb2A3KGF7 1181 aa13.26□□□□□ -0.29
Traf3-201ENSMUST00000021706 Ttll5Q8CHB8 1328 aa13.26□□□□□ -0.29
Traf3-201ENSMUST00000021706 Dhx9O70133 1380 aaKnown RBP13.25□□□□□ -0.29
Traf3-201ENSMUST00000021706 Map3k5O35099 1380 aa13.24□□□□□ -0.29
Traf3-201ENSMUST00000021706 Grin2aP35436 1464 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms