RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Spag9Q58A65 1321 aaKnown RBP12.33□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Chrna2Q91X60 512 aa12.33□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Pak3Q61036 559 aa12.32□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Calcoco2A2A6M5 331 aa12.32□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Rsph4aQ8BYM7 716 aa12.32□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Znf316Q6PGE4 1016 aa12.31□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Pcmtd1P59913 357 aa12.3□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Ppm1gQ61074 542 aa12.3□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Rb1cc1Q9ESK9 1588 aa12.29□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 AknaQ80VW7 1404 aa12.29□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Lemd3Q9WU40 921 aa12.29□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 R3hcc1Q8BSI6 488 aa12.29□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Paf1Q8K2T8 535 aa12.29□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Sall2Q9QX96 1004 aa12.28□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Kri1Q8VDQ9 704 aaKnown RBP12.28□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Birc3O08863 600 aa12.28□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 PtmsQ9D0J8 101 aaKnown RBP12.27□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Bcl11bQ99PV8 884 aa12.27□□□□□ -0.44
Sptbn1-202ENSMUST00000011877 Ccdc47Q9D024 483 aaKnown RBP12.27□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Gtf2e1Q9D0D5 440 aa12.27□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Odf2A3KGV1 830 aaKnown RBP12.27□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Ddx11Q6AXC6 880 aa12.26□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Fhad1A6PWD2 1420 aa12.26□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Ap3b2Q9JME5 1082 aa12.26□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Ecm2Q5FW85 670 aa12.26□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Dbr1Q923B1 550 aa12.25□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Anks4bQ8K3X6 423 aa12.24□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 CgnP59242 1191 aa12.23□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Ccar1Q8CH18 1146 aaKnown RBP12.23□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Eea1Q8BL66 1411 aa12.22□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Mbd3Q9Z2D8 285 aaKnown RBP12.21□□□□□ -0.45
Sptbn1-202ENSMUST00000011877 Map4P27546 1125 aaKnown RBP12.2□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Tpd52l1O54818 204 aa12.2□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Rwdd1Q9CQK7 243 aa12.2□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 SetQ9EQU5 289 aaKnown RBP12.2□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Tpm4Q6IRU2 248 aa12.2□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Tmco5bQ80X59 307 aa12.19□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Brpf1B2RRD7 1212 aa12.19□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Tpm3P21107 285 aaKnown RBP12.19□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Smarce1O54941 411 aaKnown RBP12.18□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 U2af1Q9D883 239 aaKnown RBP12.18□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Fbln2P37889 1221 aa12.18□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Dhx16G3X8X0 1044 aaKnown RBP12.18□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Cald1E9QA15 768 aaKnown RBP12.18□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Tpm2P58774 284 aa12.18□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Gm21969J3QJZ1 289 aa12.17□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Smc4Q8CG47 1286 aa12.16□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Ifit1bl1D3Z6F0 470 aa12.16□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Tmf1B9EKI3 1091 aa12.16□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Mical1Q8VDP3 1048 aa12.15□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Erich6bQ9D4S6 220 aa12.15□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 CrebrfQ8CDG5 640 aaKnown RBP12.15□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Mia2Q91ZV0 1396 aa12.15□□□□□ -0.46
Sptbn1-202ENSMUST00000011877 Spryd3E9Q9B3 442 aa12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Speer4f1Q9D5Q6 258 aa12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 AU015836B2RUM3 263 aa12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 B4galnt3Q6L8S8 986 aa12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Krt82Q99M74 516 aa12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Ccdc43Q9CR29 222 aaKnown RBP12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Abcc8B2RUS7 1588 aa12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Sf3b2Q3UJB0 878 aaKnown RBP12.14□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Kif27Q7M6Z4 1394 aa12.13□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Ftsj3Q9DBE9 838 aaKnown RBP12.12□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Ccer1Q9CQL2 403 aa12.12□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Kcnn1Q9EQR3 537 aa12.11□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Rab11fip3Q8CHD8 1047 aa12.1□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 AppP12023 770 aa12.1□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 RdxP26043 583 aaKnown RBP12.1□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Pibf1E9Q6K3 756 aa12.09□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 CenpjQ569L8 1344 aa12.09□□□□□ -0.47
Sptbn1-202ENSMUST00000011877 Slc4a10Q5DTL9 1118 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 UvssaQ9D479 717 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Kif3bQ61771 747 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Cabp4Q8VHC5 271 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Golga2Q921M4 999 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Eva1cP58659 440 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Dcaf11Q91VU6 549 aa12.08□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Rundc1Q0VDN7 615 aa12.07□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Dcaf1Q80TR8 1506 aa12.07□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Tpm1P58771 284 aa12.07□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Chmp7Q8R1T1 451 aa12.07□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Znf330Q922H9 316 aa12.07□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Hs1bp3Q3TC93 395 aa12.06□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Evc2Q8K1G2 1220 aa12.06□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Map7d2A2AG50 781 aa12.06□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 MsnP26041 577 aaKnown RBP12.06□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Stk31Q99MW1 1018 aa12.05□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Cplx2P84086 134 aa12.05□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Utp14aQ640M1 767 aaKnown RBP12.05□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Rpap1Q80TE0 1409 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 NacadQ5SWP3 1504 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Pip4k2bQ80XI4 416 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 BccipQ9CWI3 316 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Senp3Q9EP97 568 aaKnown RBP12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Atp6v1dP57746 247 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Egfem1Q8C088 590 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 A0A1L1SQF0 893 aa12.04□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Tnnt2P50752 301 aa12.03□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Ccp110Q7TSH4 1004 aa12.03□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Ppp4r3bQ922R5 820 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms