RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	SPF1	P39986	1215 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	NUP100	Q02629	959 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	YMR265C	Q03508	461 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	YLR352W	Q06479	807 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	YOL075C	Q08234	1294 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	ATG9	Q12142	997 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	TRX1	P22217	103 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	ERG8	P24521	451 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	RSC6	P25632	483 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	ADE1	P27616	306 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	ERG9	P29704	444 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	TOM20	P35180	183 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	DHR2	P36009	735 aa	Predicted RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	PRS3	P38689	320 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	YMR124W	P39523	943 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	TMN3	P40071	706 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	ALG8	P40351	577 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	PKP1	P40530	394 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	MNT3	P40549	630 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	MND2	P40577	368 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	UBP6	P43593	499 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	VAM6	Q07468	1049 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	YAP7	Q08182	245 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	NOB1	Q08444	459 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	BRR1	Q99177	341 aa	Predicted RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	CAR1	P00812	333 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	ARG4	P04076	463 aa	Predicted RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	FUM1	P08417	488 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	ARG1	P22768	420 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	TAH1	P25638	111 aa	Predicted RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	YMC1	P32331	307 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	AIM26	P32858	118 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	PRS1	P32895	427 aa	Known RBP	2.79	□□□□□ -1.96
SKP2	YNL311C	HSE1	P38753	452 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	FET3	P38993	636 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	YTA6	P40328	754 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	ATG36	P46983	293 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	YGR111W	P53265	400 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	YGR127W	P53275	312 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	ATG21	Q02887	496 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	YDR222W	Q04925	415 aa		2.79	□□□□□ -1.96
SKP2	YNL311C	CYR1	P08678	2026 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	CAR2	P07991	424 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	PRB1	P09232	635 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	SRV2	P17555	526 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	DIT1	P21623	536 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	MXR2	P25566	168 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	SAC6	P32599	642 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	TIP20	P33891	701 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	IFA38	P38286	347 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	SOH1	P38633	127 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	YER188W	P40103	239 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	GAT2	P40209	560 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	YIL067C	P40514	678 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	AIP1	P46680	615 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	GND2	P53319	492 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	VPS16	Q03308	798 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	ADH6	Q04894	360 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	YOL159C	Q08300	171 aa		2.78	□□□□□ -1.96
SKP2	YNL311C	HRK1	Q08732	759 aa	Known RBP	2.78	□□□□□ -1.96
SKP2	YNL311C	YER145C-A	A0A023PYF4	145 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MET2	P08465	486 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	SFL1	P20134	766 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	RPB9	P27999	122 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MRPL9	P31334	269 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	PEP12	P32854	288 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	LOT5	P34234	306 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	YKT6	P36015	200 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	YHR127W	P38833	243 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	PMC1	P38929	1173 aa	Predicted RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	HXT8	P40886	569 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	SEC27	P41811	889 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	MPS2	P53159	387 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	ERG26	P53199	349 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	DUG3	P53871	357 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	OSH6	Q02201	448 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	ROY1	Q04847	553 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	YMR034C	Q05131	434 aa	Predicted RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	YPR078C	Q06813	372 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	NRT1	Q08485	598 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	THI72	Q08579	599 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MLH3	Q12083	715 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	ATG29	Q12092	213 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	SFG1	Q12507	346 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	RPI1	P23250	407 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	CHA1	P25379	360 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	CRM1	P30822	1084 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	IRC6	P43615	237 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MDV1	P47025	714 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	TEX1	P53851	422 aa	Known RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	NOP15	P53927	220 aa	Predicted RBP	2.77	□□□□□ -1.97
SKP2	YNL311C	YEH1	Q07804	573 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MSA1	Q08471	629 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MDM12	Q92328	271 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	MTR10	Q99189	972 aa		2.77	□□□□□ -1.97
SKP2	YNL311C	TSR4	P25040	408 aa		2.76	□□□□□ -1.97
SKP2	YNL311C	ATP11	P32453	318 aa		2.76	□□□□□ -1.97
SKP2	YNL311C	YME1	P32795	747 aa		2.76	□□□□□ -1.97
SKP2	YNL311C	MEP1	P40260	492 aa		2.76	□□□□□ -1.97
SKP2	YNL311C	TEL2	P53038	688 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 81 ms