RNA–Protein interactions for RNA: YLR265C

NEJ1, Transcript of Protein involved in regulation of nonhomologous end joining, yeast

Gene NEJ1, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEJ1	YLR265C	MRPL51	Q06090	140 aa	Predicted RBP	4.06	□□□□□ -1.76
NEJ1	YLR265C	OPY2	Q06810	360 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	BSC6	Q08280	497 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	YOR365C	Q08844	703 aa		4.06	□□□□□ -1.76
NEJ1	YLR265C	YHR210C	P38893	341 aa		4.05	□□□□□ -1.76
NEJ1	YLR265C	HAT2	P39984	401 aa		4.05	□□□□□ -1.76
NEJ1	YLR265C	PRE5	P40302	234 aa	Known RBP	4.05	□□□□□ -1.76
NEJ1	YLR265C	YJR154W	P47181	346 aa		4.05	□□□□□ -1.76
NEJ1	YLR265C	YMR018W	Q04364	514 aa		4.05	□□□□□ -1.76
NEJ1	YLR265C	YDL057W	Q07379	328 aa		4.05	□□□□□ -1.76
NEJ1	YLR265C	CTF3	Q12748	733 aa		4.05	□□□□□ -1.76
NEJ1	YLR265C	CDC16	P09798	840 aa		4.04	□□□□□ -1.76
NEJ1	YLR265C	FUN19	P28003	413 aa	Predicted RBP	4.04	□□□□□ -1.76
NEJ1	YLR265C	UBP11	P36026	717 aa		4.04	□□□□□ -1.76
NEJ1	YLR265C	YBL029W	P38201	376 aa		4.04	□□□□□ -1.76
NEJ1	YLR265C	CIN4	P39110	191 aa		4.04	□□□□□ -1.76
NEJ1	YLR265C	ALG8	P40351	577 aa		4.04	□□□□□ -1.76
NEJ1	YLR265C	FMP40	Q08968	688 aa	Predicted RBP	4.04	□□□□□ -1.76
NEJ1	YLR265C	SUC2	P00724	532 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	RAD52	P06778	471 aa	Known RBP	4.03	□□□□□ -1.76
NEJ1	YLR265C	MRP13	P12686	339 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	SUI2	P20459	304 aa	Known RBP	4.03	□□□□□ -1.76
NEJ1	YLR265C	RNA14	P25298	677 aa	Known RBP	4.03	□□□□□ -1.76
NEJ1	YLR265C	RRT2	P38332	387 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	CCT6	P39079	546 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	AFG3	P39925	761 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	YBR126W-A	Q8TGU7	68 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	SGS1	P35187	1447 aa		4.03	□□□□□ -1.76
NEJ1	YLR265C	PEP4	P07267	405 aa	Known RBP	4.02	□□□□□ -1.77
NEJ1	YLR265C	YCR007C	P25354	239 aa		4.02	□□□□□ -1.77
NEJ1	YLR265C	PUT3	P25502	979 aa	Predicted RBP	4.02	□□□□□ -1.77
NEJ1	YLR265C	SSH4	P32343	579 aa		4.02	□□□□□ -1.77
NEJ1	YLR265C	MCM10	P32354	571 aa		4.02	□□□□□ -1.77
NEJ1	YLR265C	MUD2	P36084	527 aa	Known RBP	4.02	□□□□□ -1.77
NEJ1	YLR265C	RFS1	P38234	210 aa	Known RBP	4.02	□□□□□ -1.77
NEJ1	YLR265C	DUO1	P53168	247 aa	Known RBP	4.02	□□□□□ -1.77
NEJ1	YLR265C	NGL3	Q03210	505 aa		4.02	□□□□□ -1.77
NEJ1	YLR265C	ART10	P18634	518 aa	Known RBP	4.01	□□□□□ -1.77
NEJ1	YLR265C	YEL045C	P32616	141 aa		4.01	□□□□□ -1.77
NEJ1	YLR265C	IRC15	Q02733	499 aa		4.01	□□□□□ -1.77
NEJ1	YLR265C	IVY1	Q04934	453 aa		4.01	□□□□□ -1.77
NEJ1	YLR265C	YOR387C	Q08910	206 aa		4.01	□□□□□ -1.77
NEJ1	YLR265C	NOP58	Q12499	511 aa	Known RBP	4.01	□□□□□ -1.77
NEJ1	YLR265C	HSH49	Q99181	213 aa	Predicted RBP	4.01	□□□□□ -1.77
NEJ1	YLR265C	DPB3	P27344	201 aa		4	□□□□□ -1.77
NEJ1	YLR265C	COQ9	Q05779	260 aa		4	□□□□□ -1.77
NEJ1	YLR265C	VPS74	Q06385	345 aa		4	□□□□□ -1.77
NEJ1	YLR265C	ELO2	P25358	347 aa		3.99	□□□□□ -1.77
NEJ1	YLR265C	UTR4	P32626	227 aa		3.99	□□□□□ -1.77
NEJ1	YLR265C	RPC11	Q04307	110 aa	Predicted RBP	3.99	□□□□□ -1.77
NEJ1	YLR265C	HUA2	Q12134	243 aa		3.99	□□□□□ -1.77
NEJ1	YLR265C	YPT6	Q99260	215 aa		3.99	□□□□□ -1.77
NEJ1	YLR265C	LPD1	P09624	499 aa	Known RBP	3.98	□□□□□ -1.77
NEJ1	YLR265C	EST1	P17214	699 aa	Predicted RBP	3.98	□□□□□ -1.77
NEJ1	YLR265C	NAM9	P27929	486 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	SHP1	P34223	423 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	FLC2	P39719	783 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	TIF4631	P39935	952 aa	Known RBP	3.98	□□□□□ -1.77
NEJ1	YLR265C	IPI3	P53877	555 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	PHO92	Q06390	306 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	YEH1	Q07804	573 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	THP1	Q08231	455 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	NMD4	Q12129	218 aa		3.98	□□□□□ -1.77
NEJ1	YLR265C	LSP1	Q12230	341 aa	Known RBP	3.98	□□□□□ -1.77
NEJ1	YLR265C	SPT15	P13393	240 aa	Known RBP	3.97	□□□□□ -1.77
NEJ1	YLR265C	YIM1	P28625	365 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	HXT1	P32465	570 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	PAH1	P32567	862 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	SEF1	P34228	1148 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	DUG2	P38149	878 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	ALK1	P43633	760 aa	Known RBP	3.97	□□□□□ -1.77
NEJ1	YLR265C	AIM22	P47051	409 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	TOF2	Q02208	771 aa		3.97	□□□□□ -1.77
NEJ1	YLR265C	HEL2	Q05580	639 aa	Known RBP	3.97	□□□□□ -1.77
NEJ1	YLR265C	RRP12	Q12754	1228 aa	Known RBP	3.97	□□□□□ -1.77
NEJ1	YLR265C	CPR1	P14832	162 aa	Known RBP	3.96	□□□□□ -1.78
NEJ1	YLR265C	MSN2	P33748	704 aa		3.96	□□□□□ -1.78
NEJ1	YLR265C	TCM62	P38228	572 aa	Known RBP	3.96	□□□□□ -1.78
NEJ1	YLR265C	ALG5	P40350	334 aa		3.96	□□□□□ -1.78
NEJ1	YLR265C	VID30	P53076	958 aa		3.96	□□□□□ -1.78
NEJ1	YLR265C	BTN2	P53286	410 aa		3.96	□□□□□ -1.78
NEJ1	YLR265C	PAL1	Q05518	499 aa	Known RBP	3.96	□□□□□ -1.78
NEJ1	YLR265C	DEG1	P31115	442 aa	Known RBP	3.95	□□□□□ -1.78
NEJ1	YLR265C	YME1	P32795	747 aa		3.95	□□□□□ -1.78
NEJ1	YLR265C	BNA4	P38169	460 aa		3.95	□□□□□ -1.78
NEJ1	YLR265C	MTC6	P38849	526 aa		3.95	□□□□□ -1.78
NEJ1	YLR265C	PTH1	P38876	190 aa	Known RBP	3.95	□□□□□ -1.78
NEJ1	YLR265C	GWT1	P47026	490 aa		3.95	□□□□□ -1.78
NEJ1	YLR265C	IMD4	P50094	524 aa	Known RBP	3.95	□□□□□ -1.78
NEJ1	YLR265C	GPI1	P53306	609 aa		3.95	□□□□□ -1.78
NEJ1	YLR265C	EXO70	P19658	623 aa		3.94	□□□□□ -1.78
NEJ1	YLR265C	TCD2	P36101	447 aa	Known RBP	3.94	□□□□□ -1.78
NEJ1	YLR265C	MSR1	P38714	643 aa		3.94	□□□□□ -1.78
NEJ1	YLR265C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
NEJ1	YLR265C	TMC1	Q08422	150 aa	Predicted RBP	3.94	□□□□□ -1.78
NEJ1	YLR265C	CFT2	Q12102	859 aa	Predicted RBP	3.94	□□□□□ -1.78
NEJ1	YLR265C	TMS1	Q12116	473 aa		3.94	□□□□□ -1.78
NEJ1	YLR265C	RLM1	Q12224	676 aa		3.94	□□□□□ -1.78
NEJ1	YLR265C	ERV2	Q12284	196 aa		3.94	□□□□□ -1.78
NEJ1	YLR265C	SEM1	O94742	89 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms