RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W RAD30Q04049 632 aa1.48□□□□□ -2.17
LCD1YDR499W YKU80Q04437 629 aa1.48□□□□□ -2.17
LCD1YDR499W BNA5Q05979 453 aa1.48□□□□□ -2.17
LCD1YDR499W VIP1Q06685 1146 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W YDL057WQ07379 328 aa1.48□□□□□ -2.17
LCD1YDR499W TMS1Q12116 473 aa1.48□□□□□ -2.17
LCD1YDR499W FAB1P34756 2278 aa1.48□□□□□ -2.17
LCD1YDR499W CDC16P09798 840 aa1.48□□□□□ -2.17
LCD1YDR499W CLN3P13365 580 aa1.48□□□□□ -2.17
LCD1YDR499W BUD5P25300 642 aaPredicted RBP1.48□□□□□ -2.17
LCD1YDR499W ADH7P25377 361 aa1.48□□□□□ -2.17
LCD1YDR499W CHS3P29465 1165 aa1.48□□□□□ -2.17
LCD1YDR499W SYN8P31377 255 aa1.48□□□□□ -2.17
LCD1YDR499W MRP4P32902 394 aa1.48□□□□□ -2.17
LCD1YDR499W PAD1P33751 242 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
LCD1YDR499W MUD2P36084 527 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W YGL039WP53183 348 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W BTN2P53286 410 aa1.48□□□□□ -2.17
LCD1YDR499W YSA1Q01976 231 aa1.48□□□□□ -2.17
LCD1YDR499W IRC15Q02733 499 aa1.48□□□□□ -2.17
LCD1YDR499W ELP3Q02908 557 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W IVY1Q04934 453 aa1.48□□□□□ -2.17
LCD1YDR499W PBA1Q05778 276 aa1.48□□□□□ -2.17
LCD1YDR499W YDR056CQ12025 205 aa1.48□□□□□ -2.17
LCD1YDR499W SKM1Q12469 655 aa1.48□□□□□ -2.17
LCD1YDR499W KGD1P20967 1014 aaKnown RBP1.47□□□□□ -2.17
LCD1YDR499W PRE8P23639 250 aa1.47□□□□□ -2.17
LCD1YDR499W PAH1P32567 862 aa1.47□□□□□ -2.17
LCD1YDR499W LYS14P40971 790 aa1.47□□□□□ -2.17
LCD1YDR499W YGR210CP42942 411 aa1.47□□□□□ -2.17
LCD1YDR499W LYS4P49367 693 aaPredicted RBP1.47□□□□□ -2.17
LCD1YDR499W YDL121CQ07541 149 aa1.47□□□□□ -2.17
LCD1YDR499W RRG7Q08774 242 aaPredicted RBP1.47□□□□□ -2.17
LCD1YDR499W HRT3Q12347 344 aa1.47□□□□□ -2.17
LCD1YDR499W NAT1P12945 854 aaKnown RBP1.47□□□□□ -2.17
LCD1YDR499W KAR3P17119 729 aa1.47□□□□□ -2.17
LCD1YDR499W ISY1P21374 235 aaPredicted RBP1.47□□□□□ -2.17
LCD1YDR499W YBL055CP34220 418 aaPredicted RBP1.47□□□□□ -2.17
LCD1YDR499W RPL32P38061 130 aaKnown RBP1.47□□□□□ -2.17
LCD1YDR499W ICS2P38284 255 aa1.47□□□□□ -2.17
LCD1YDR499W YFL067WP43537 175 aa1.47□□□□□ -2.17
LCD1YDR499W UPF3P48412 387 aaKnown RBP1.47□□□□□ -2.17
LCD1YDR499W YGR126WP53274 230 aa1.47□□□□□ -2.17
LCD1YDR499W YLR152CP54072 576 aa1.47□□□□□ -2.17
LCD1YDR499W MSC1Q03104 513 aa1.47□□□□□ -2.17
LCD1YDR499W VPS74Q06385 345 aa1.47□□□□□ -2.17
LCD1YDR499W TCO89Q08921 799 aa1.47□□□□□ -2.17
LCD1YDR499W HHF1P02309 103 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W LPD1P09624 499 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W AAC3P18238 307 aa1.46□□□□□ -2.18
LCD1YDR499W YCK1P23291 538 aa1.46□□□□□ -2.18
LCD1YDR499W IMG1P25626 169 aa1.46□□□□□ -2.18
LCD1YDR499W SPR1P32603 445 aa1.46□□□□□ -2.18
LCD1YDR499W AUR1P36107 401 aaPredicted RBP1.46□□□□□ -2.18
LCD1YDR499W NOP16P40007 231 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W GWT1P47026 490 aa1.46□□□□□ -2.18
LCD1YDR499W DRN1P53255 507 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W ARK1P53974 638 aa1.46□□□□□ -2.18
LCD1YDR499W YPL272CQ08984 517 aa1.46□□□□□ -2.18
LCD1YDR499W ERV2Q12284 196 aa1.46□□□□□ -2.18
LCD1YDR499W ENT1Q12518 454 aa1.46□□□□□ -2.18
LCD1YDR499W SEM1O94742 89 aa1.46□□□□□ -2.18
LCD1YDR499W RAD52P06778 471 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W ARD1P07347 238 aaPredicted RBP1.46□□□□□ -2.18
LCD1YDR499W CHS1P08004 1131 aa1.46□□□□□ -2.18
LCD1YDR499W BOS1P25385 244 aa1.46□□□□□ -2.18
LCD1YDR499W NUP133P36161 1157 aa1.46□□□□□ -2.18
LCD1YDR499W MAL33P38157 468 aa1.46□□□□□ -2.18
LCD1YDR499W YBL029WP38201 376 aa1.46□□□□□ -2.18
LCD1YDR499W TMA108P40462 946 aa1.46□□□□□ -2.18
LCD1YDR499W YJR154WP47181 346 aa1.46□□□□□ -2.18
LCD1YDR499W DUO1P53168 247 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W PIR3Q03180 325 aa1.46□□□□□ -2.18
LCD1YDR499W NGL3Q03210 505 aa1.46□□□□□ -2.18
LCD1YDR499W PHO92Q06390 306 aa1.46□□□□□ -2.18
LCD1YDR499W MRPL35Q06678 367 aa1.46□□□□□ -2.18
LCD1YDR499W BUD21Q08492 214 aaPredicted RBP1.46□□□□□ -2.18
LCD1YDR499W NMD4Q12129 218 aa1.46□□□□□ -2.18
LCD1YDR499W NCE102Q12207 173 aaRIP-Chip data1.46□□□□□ -2.18not detected
LCD1YDR499W LSP1Q12230 341 aaKnown RBP1.46□□□□□ -2.18
LCD1YDR499W SPE4Q12455 300 aa1.46□□□□□ -2.18
LCD1YDR499W YCR007CP25354 239 aa1.45□□□□□ -2.18
LCD1YDR499W PUP3P25451 205 aaKnown RBP1.45□□□□□ -2.18
LCD1YDR499W PRS1P32895 427 aaKnown RBP1.45□□□□□ -2.18
LCD1YDR499W ELP2P42935 788 aa1.45□□□□□ -2.18
LCD1YDR499W YGR127WP53275 312 aa1.45□□□□□ -2.18
LCD1YDR499W EFM6P53970 246 aa1.45□□□□□ -2.18
LCD1YDR499W YML037CQ03703 340 aa1.45□□□□□ -2.18
LCD1YDR499W ETT1Q08421 412 aaKnown RBP1.45□□□□□ -2.18
LCD1YDR499W HUA2Q12134 243 aa1.45□□□□□ -2.18
LCD1YDR499W RBD2Q12270 262 aa1.45□□□□□ -2.18
LCD1YDR499W NOP58Q12499 511 aaKnown RBP1.45□□□□□ -2.18
LCD1YDR499W YBR126W-AQ8TGU7 68 aa1.45□□□□□ -2.18
LCD1YDR499W ADH2P00331 348 aaKnown RBP1.44□□□□□ -2.18
LCD1YDR499W HEM15P16622 393 aa1.44□□□□□ -2.18
LCD1YDR499W GFD2P25370 566 aaKnown RBP1.44□□□□□ -2.18
LCD1YDR499W POL4P25615 582 aa1.44□□□□□ -2.18
LCD1YDR499W YIH1P25637 258 aa1.44□□□□□ -2.18
LCD1YDR499W IMP2'P32351 346 aa1.44□□□□□ -2.18
LCD1YDR499W SWE1P32944 819 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 121.2 ms