RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	TOA1	P32773	286 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	CNS1	P33313	385 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	RMA1	P36001	430 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	TEF4	P36008	412 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	MRPL36	P36531	177 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	SWC5	P38326	303 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	MSS4	P38994	779 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	VFA1	P40080	203 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	PXA1	P41909	870 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	DLD2	P46681	530 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	RPS10B	P46784	105 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	ECL1	P48235	211 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	PEF1	P53238	335 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	YTP1	P53584	459 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	CSL4	P53859	292 aa	Predicted RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	MRPL19	P53875	158 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	IPI3	P53877	555 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	ASI2	P53895	289 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	SSL2	Q00578	843 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	YMR178W	Q03219	274 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	YDR131C	Q03899	556 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	YLR287C	Q05881	355 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	GRX8	Q05926	109 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	YPR114W	Q06107	315 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	RPS10A	Q08745	105 aa	Predicted RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	CIR2	Q08822	631 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	SUL2	Q12325	893 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	IZH4	Q99393	312 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	STT4	P37297	1900 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	ERG20	P08524	352 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	GCD1	P09032	578 aa	Predicted RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	ABF1	P14164	731 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	POL30	P15873	258 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	PMA2	P19657	947 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	TRX1	P22217	103 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	SED4	P25365	1065 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	CWH43	P25618	953 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	CWP1	P28319	239 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	SPC110	P32380	944 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	YKL050C	P35736	922 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	SIC1	P38634	284 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	ELO1	P39540	310 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	KHA1	P40309	873 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	ATM1	P40416	690 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	PRM2	P40534	656 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	IRC6	P43615	237 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	CTK3	P46963	296 aa	Predicted RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	GTF1	P53260	183 aa	Predicted RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	TIM13	P53299	105 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	YGR266W	P53326	701 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	ARG5,6	Q01217	863 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	TAF11	Q04226	346 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	UFO1	Q04511	668 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	VBA4	Q04602	768 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	TRI1	Q05024	226 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	SWC7	Q06707	132 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	CMS1	Q07897	291 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	ETT1	Q08421	412 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	YOR389W	Q08912	624 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	APL5	Q08951	932 aa	Known RBP	4.17	□□□□□ -1.74
DPB4	YDR121W	YPL278C	Q08990	100 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	UPC2	Q12151	913 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	YDR061W	Q12298	539 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	GPM3	Q12326	303 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	SCM3	Q12334	223 aa		4.17	□□□□□ -1.74
DPB4	YDR121W	YLR415C	O13578	112 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	CYC1	P00044	109 aa	Predicted RBP	4.16	□□□□□ -1.74
DPB4	YDR121W	TUB1	P09733	447 aa	Known RBP	4.16	□□□□□ -1.74
DPB4	YDR121W	SCH9	P11792	824 aa	Known RBP	4.16	□□□□□ -1.74
DPB4	YDR121W	SEC15	P22224	910 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	RBK1	P25332	333 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	ARP2	P32381	391 aa	Known RBP	4.16	□□□□□ -1.74
DPB4	YDR121W	STE14	P32584	239 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	YHR112C	P38716	378 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	TPA1	P40032	644 aa	Known RBP	4.16	□□□□□ -1.74
DPB4	YDR121W	YNL040W	P53960	456 aa	Predicted RBP	4.16	□□□□□ -1.74
DPB4	YDR121W	REG1	Q00816	1014 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	PPN1	Q04119	674 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	YDR278C	Q05612	105 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	YLR352W	Q06479	807 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	YDL073W	Q07454	984 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	TPO1	Q07824	586 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	YOL073C	Q08232	322 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	GPB1	Q08886	897 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	COX17	Q12287	69 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	DFG16	Q99234	619 aa		4.16	□□□□□ -1.74
DPB4	YDR121W	COX5A	P00424	153 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
DPB4	YDR121W	YKR104W	P0CE69	306 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	PPH21	P23594	369 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	SNT1	P25357	1226 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	PRE4	P30657	266 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	APT2	P36973	181 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	MUM2	P38236	366 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	RTT107	P38850	1070 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	TIM17	P39515	158 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	CAB2	P40506	365 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	DJP1	P40564	432 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	YJL132W	P47014	750 aa		4.15	□□□□□ -1.75
DPB4	YDR121W	BIT61	P47041	543 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms